Factsheet for Zm00001d023950_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 5
endoplasmic reticulum 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES16857	Sorghum	mitochondrion	87.06	88.78
Zm00001d041782_P001	Maize	plasma membrane	80.91	83.89
TraesCS5D01G319700.1	Wheat	mitochondrion	76.05	78.86
HORVU5Hr1G080580.1	Barley	endoplasmic reticulum, mitochondrion, plastid	76.38	78.67
TraesCS5A01G313000.1	Wheat	mitochondrion	75.4	77.93
TraesCS5B01G313900.1	Wheat	golgi, unclear	75.08	77.33
TraesCS7B01G485000.1	Wheat	mitochondrion, plastid	75.08	77.08
TraesCS7A01G560100.1	Wheat	mitochondrion, plastid	74.76	76.49
Zm00001d028737_P001	Maize	golgi	41.75	76.33
Os12t0204500-01	Rice	endoplasmic reticulum, golgi	72.49	75.93
TraesCS7D01G549800.1	Wheat	mitochondrion, plastid	75.08	75.82
HORVU7Hr1G120340.1	Barley	plastid	75.4	65.27
Zm00001d007269_P001	Maize	mitochondrion, plastid	49.84	47.09
Zm00001d027968_P001	Maize	cytosol, mitochondrion, plastid	45.63	45.48
Zm00001d007327_P001	Maize	plasma membrane	42.39	42.67
Zm00001d014532_P001	Maize	plasma membrane	34.63	33.33
Zm00001d002066_P001	Maize	plasma membrane	35.28	32.54
Zm00001d003239_P001	Maize	cytosol	17.48	32.34
Zm00001d015307_P001	Maize	golgi, mitochondrion, plastid	32.36	30.96
Zm00001d001763_P001	Maize	plasma membrane	27.51	30.25

Protein Annotations

EntrezGene:103640992	MapMan:21.2.2.2.3	ProteinID:AQK40443.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740
GO:GO:0032259	GO:GO:0045492	InterPro:IRX15/IRX15L/IGXM	UniProt:K7UDG0	PFAM:PF04669	PANTHER:PTHR31444
PANTHER:PTHR31444:SF2	InterPro:Polysacc_synth_dom	TIGRFAMs:TIGR01627	TMHMM:TMhelix	UniParc:UPI0001CA8F87	EnsemblPlantsGene:Zm00001d023950
EnsemblPlants:Zm00001d023950_P001	EnsemblPlants:Zm00001d023950_T001	SEG:seg	:	:	:

Description

Glucuronoxylan 4-O-methyltransferase 2

Coordinates

chr10:-:31183136..31184065

Molecular Weight (calculated)

33092.6 Da

IEP (calculated)

7.092

GRAVY (calculated)

-0.002

Length

309 amino acids

Sequence
(BLAST)

001: MSSPTHVRKA IRFASLRAKI AQQGKTGLAL RLLLAAALAG FLLVFAARTL VTPSPAPTSS SQAQEYHQDA APECGKGNAG LPLAVAEALV HYTTSNVTPQ
101: QTADEIGVSL RVLQRRAPCN FLVFGLGLDS PMWAALNHGG RTVFLEEDAS WIASVRSKHP GLESYHVAYD TVLTDADSLL GLRDHPACVA QPDLAAAAAA
201: SCRLALALKG LPPVFHELEW DLVMVDAPTG WTPQAPGRMA AIYTAGMAAR ARRPGDGPTD VFVHDVDRPV EDNFSKAFLC EGYLAEQVGR IRHFVIPSHR
301: EKDGTPFCP

Best Arabidopsis Sequence Match ( AT1G33800.1 )
(BLAST)

001: MRTKSPSSLN LKVIFIGSSI LILIIIYLAR SNISSSSSKP ISKTNLSQEE EETQHKQEGC PTTQQCTKMP LSLSDALVHY VTSNVTPQQT FDEVSVSKRV
101: LDKKSPCNFL VFGLGHDSLM WASLNHGGRT LFIEEDQAWI AIVTKKFPNL ESYHVVYDTK VKDSDKLMEL GRSEECRSVS DPRNSKCDLA LKDFPADFYE
201: TKWDLIMVDA PTGYHEEAPG RMSAIYTAGL LARNREDGET DVFVHDVNRP VEDEFSATFL CKGYMREQNG RLRHFTIPSH RARAGRPFCP VEVDRRR

Arabidopsis Description

GXM3GXMT1 [Source:UniProtKB/TrEMBL;Acc:A0A178W7W0]
SUBAcon: [plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.