Factsheet for Zm00001d015307_P001

Subcellular Localization

min:

: max

Winner_takes_all: golgi, plastid, mitochondrion

Predictor Summary:

plastid 2
mitochondrion 3
golgi 3
extracellular 1
plasma membrane 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, mitochondrion, plastid
Any Predictor:	mitochondrion, plastid, secretory
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	mitochondrion
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU84413	Sorghum	golgi, mitochondrion	90.4	91.25
HORVU0Hr1G015370.1	Barley	cytosol, extracellular	60.68	82.01
TraesCS6A01G131900.1	Wheat	mitochondrion	74.92	73.78
TraesCS6D01G121700.1	Wheat	mitochondrion	73.68	72.78
TraesCS6B01G160200.1	Wheat	mitochondrion	73.37	71.39
Zm00001d014532_P001	Maize	plasma membrane	67.18	67.6
Os02t0158500-00	Rice	plastid	76.78	63.27
Zm00001d003239_P001	Maize	cytosol	30.65	59.28
GSMUA_Achr9P25260_001	Banana	golgi	56.66	55.79
VIT_03s0063g00030.t01	Wine grape	plastid	36.22	53.18
GSMUA_Achr6P29610_001	Banana	endoplasmic reticulum, golgi, plastid	53.56	53.07
GSMUA_Achr8P03360_001	Banana	golgi	53.87	53.05
Zm00001d002066_P001	Maize	plasma membrane	54.49	52.54
GSMUA_Achr10P...	Banana	extracellular, plasma membrane, plastid	46.44	52.08
Solyc01g107800.2.1	Tomato	endoplasmic reticulum, golgi, mitochondrion, plastid	45.82	47.13
PGSC0003DMT400066571	Potato	endoplasmic reticulum, golgi, mitochondrion, plastid	45.82	47.13
PGSC0003DMT400065494	Potato	golgi, plasma membrane, plastid	43.65	46.69
VIT_07s0031g00110.t01	Wine grape	golgi	44.27	46.13
CDX81329	Canola	plastid	43.65	45.78
KRH50341	Soybean	golgi, plastid	43.34	45.02
KRH28432	Soybean	mitochondrion	42.72	44.81
AT5G67210.1	Thale cress	endoplasmic reticulum, golgi, mitochondrion, plastid	43.96	44.8
Bra012143.1-P	Field mustard	plastid	43.65	44.76
KRH77040	Soybean	mitochondrion	42.11	44.74
PGSC0003DMT400064322	Potato	plastid	42.41	44.48
Bra036059.1-P	Field mustard	endoplasmic reticulum, golgi, plastid	44.58	44.44
CDY12819	Canola	golgi, mitochondrion, plasma membrane, plastid	43.34	44.44
AT3G50220.1	Thale cress	endoplasmic reticulum, golgi	44.27	44.41
KRH70689	Soybean	plastid	44.27	44.27
Solyc02g093090.1.1	Tomato	extracellular, nucleus	42.11	44.16
CDY30600	Canola	endoplasmic reticulum, golgi	44.27	44.14
CDY17753	Canola	endoplasmic reticulum, golgi	44.27	44.14
CDY01429	Canola	golgi, mitochondrion, plasma membrane, plastid	43.03	44.13
KRH57814	Soybean	mitochondrion	41.49	42.41
KRH04549	Soybean	plastid	40.87	41.9
Zm00001d028737_P001	Maize	golgi	19.81	37.87
Bra039840.1-P	Field mustard	plastid	38.08	37.85
CDY13145	Canola	plastid	38.39	37.8
Bra013107.1-P	Field mustard	plastid	38.39	37.8
CDY62313	Canola	plastid	37.15	37.5
CDX89660	Canola	plastid	38.39	37.46
CDY37228	Canola	plastid	36.84	36.84
AT2G15440.1	Thale cress	plastid	36.84	36.17
Zm00001d041782_P001	Maize	plasma membrane	32.2	34.9
Zm00001d023950_P001	Maize	mitochondrion	30.96	32.36
Zm00001d007327_P001	Maize	plasma membrane	29.72	31.27
Zm00001d001763_P001	Maize	plasma membrane	26.32	30.25
Zm00001d007269_P001	Maize	mitochondrion, plastid	30.03	29.66
Zm00001d027968_P001	Maize	cytosol, mitochondrion, plastid	19.2	20.0

Protein Annotations

EntrezGene:100193840	MapMan:35.1	ProteinID:AQK68628.1	UniProt:B4FGH2	EMBL:BT036210	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0045492	InterPro:IRX15/IRX15L/IGXM
PFAM:PF04669	PANTHER:PTHR31444	PANTHER:PTHR31444:SF19	InterPro:Polysacc_synth_dom	TIGRFAMs:TIGR01627	TMHMM:TMhelix
UniParc:UPI00017B6945	EnsemblPlantsGene:Zm00001d015307	EnsemblPlants:Zm00001d015307_P001	EnsemblPlants:Zm00001d015307_T001	SEG:seg	:

Description

Protein IRX15-LIKE

Coordinates

chr5:-:83963205..83964677

Molecular Weight (calculated)

34182.0 Da

IEP (calculated)

7.417

GRAVY (calculated)

0.073

Length

323 amino acids

Sequence
(BLAST)

001: MKAMAGPKLL VVHASSNKAL NGMAPTSPAS PGWSRCLWLV VFLALFTCVS LLTVLSTARA SAGAPACQAA SLTASAAGAT EAGLPRHVFD ALVQYAAAAG
101: NLSSSMPEPD VRAIASVLRR RAPCNLLVFG LGAETPLWRA LNHGGRTVFL DENPYYVAHL EGKHPGLEAY DVAYATAVRE LPDLLDAARA ARAAECRPVQ
201: NLLFSECRLA INDLPNQLYD VAWDVILVDG PRGFMEGSPG RMSAIYSAAV MARTKGAETE VMVHDYEREV ERACGREFLC DENRVTATST PSLGHFLVRG
301: GAAANREAFC GPPAGAAQKS KPS

Best Arabidopsis Sequence Match ( AT5G67210.1 )
(BLAST)

001: MKSGGNTNTK LILVHPYIQK QTSTNRLWLL AFVSFFTIAF LLTLLYTTDS IISSKNNSAT VSSAVNSAVT TATISQLPTT AINAMLHYAS RSNDSYHMSY
101: GEMKSISDVL RRCSPPCNLL VFGLTHETLL WKSLNHNGRT VFIEENRYYA AYFEEIHPEI EVFDVQYTTK AREARELVSA VKEAARNECR PVQNLLFSDC
201: KLGLNDLPNH VYDVDWDVIL VDGPRGDGGD VPGRMSSIFT AAVLARSKKG GNPKTHVFVH DYYRDVERLC GDEFLCRENL VESNDLLAHY VLEKMDKNST
301: QFCRGRKKKR SVSSPSA

Arabidopsis Description

IRX15-LIRX15-L [Source:UniProtKB/TrEMBL;Acc:A0A178UEM8]
SUBAcon: [golgi,plastid,endoplasmic reticulum,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.