Factsheet for Bra039840.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 1
extracellular 2
plasma membrane 3
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY37228	Canola	plastid	96.92	97.52
Bra013107.1-P	Field mustard	plastid	82.77	82.01
AT2G15440.1	Thale cress	plastid	75.69	74.77
KRH50341	Soybean	golgi, plastid	50.77	53.05
KRH70689	Soybean	plastid	48.92	49.23
HORVU0Hr1G015370.1	Barley	cytosol, extracellular	35.08	47.7
PGSC0003DMT400066571	Potato	endoplasmic reticulum, golgi, mitochondrion, plastid	45.23	46.82
Bra012143.1-P	Field mustard	plastid	44.31	45.71
Solyc01g107800.2.1	Tomato	endoplasmic reticulum, golgi, mitochondrion, plastid	44.0	45.54
HORVU2Hr1G113560.1	Barley	golgi, plasma membrane	39.69	42.86
Bra036059.1-P	Field mustard	endoplasmic reticulum, golgi, plastid	41.85	41.98
GSMUA_Achr9P25260_001	Banana	golgi	41.85	41.46
Os04t0649900-01	Rice	mitochondrion	40.0	40.88
TraesCS2B01G540300.1	Wheat	golgi	39.69	40.82
TraesCS2D01G513800.1	Wheat	golgi, plastid	39.69	40.82
GSMUA_Achr10P...	Banana	extracellular, plasma membrane, plastid	36.0	40.62
TraesCS2A01G512400.1	Wheat	golgi	39.38	40.51
KXG27192	Sorghum	golgi, mitochondrion, plastid	39.69	39.45
GSMUA_Achr6P29610_001	Banana	endoplasmic reticulum, golgi, plastid	39.38	39.26
Zm00001d014532_P001	Maize	plasma membrane	38.77	39.25
TraesCS6D01G121700.1	Wheat	mitochondrion	39.38	39.14
OQU84413	Sorghum	golgi, mitochondrion	38.46	39.06
GSMUA_Achr8P03360_001	Banana	golgi	39.38	39.02
TraesCS6A01G131900.1	Wheat	mitochondrion	39.38	39.02
EER88850	Sorghum	plastid	39.38	38.55
TraesCS6B01G160200.1	Wheat	mitochondrion	39.08	38.25
Zm00001d015307_P001	Maize	golgi, mitochondrion, plastid	37.85	38.08
Zm00001d002066_P001	Maize	plasma membrane	39.08	37.91
TraesCS7A01G443100.1	Wheat	golgi, mitochondrion	39.69	37.83
TraesCS7D01G432300.1	Wheat	golgi, mitochondrion	39.38	37.76
TraesCS7B01G341900.1	Wheat	golgi, mitochondrion	39.69	37.72
Os06t0687600-00	Rice	golgi	38.15	36.9
HORVU7Hr1G100750.3	Barley	endoplasmic reticulum	37.54	35.99
Bra013845.1-P	Field mustard	cytosol	19.08	34.64
Bra016131.1-P	Field mustard	endoplasmic reticulum, extracellular	30.77	33.78
Bra030789.1-P	Field mustard	endoplasmic reticulum, golgi	28.62	33.1
Bra034005.1-P	Field mustard	endoplasmic reticulum, golgi	29.23	32.99
Bra004093.1-P	Field mustard	endoplasmic reticulum, golgi	28.31	31.62
Bra034460.1-P	Field mustard	golgi, plasma membrane, vacuole	28.62	31.31
Os02t0158500-00	Rice	plastid	37.23	30.87
Bra028013.1-P	Field mustard	golgi	28.0	30.74
Bra019203.1-P	Field mustard	plastid	28.0	29.17
Bra030066.1-P	Field mustard	endoplasmic reticulum, plasma membrane	25.85	29.07
Bra032854.1-P	Field mustard	endoplasmic reticulum	24.62	27.68

Protein Annotations

EnsemblPlants:Bra039840.1	EnsemblPlants:Bra039840.1-P	EnsemblPlantsGene:Bra039840	GO:GO:0005575	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0045492
InterPro:IRX15/IRX15L/IGXM	InterPro:Polysacc_synth_dom	PANTHER:PTHR31444	PANTHER:PTHR31444:SF0	PFAM:PF04669	SEG:seg
TIGRFAMs:TIGR01627	TMHMM:TMhelix	UniParc:UPI000253EB1B	UniProt:M4FFG6	MapMan:35.1	:

Description

AT2G15440 (E=2e-112) | unknown protein

Coordinates

chrScaffold000178:-:172004..172981

Molecular Weight (calculated)

35692.3 Da

IEP (calculated)

8.226

GRAVY (calculated)

-0.127

Length

325 amino acids

Sequence
(BLAST)

001: MKNNKNTNLI LFHHHNNTSS TAVTVNHHRL LLLFIFTLSL FTLIFSFSLF SSSLHSTTPT SNFLSSSSSP SSSSSLSPPI LAALLHYTSS TPPNTSMSFS
101: ELSAISTVIN SKAPTCNLLV FGLSHESLLW RSVNLKGRTV FVDENPYAVS RFEQSHPGAE AYDVVFPTKV SQAGKLLRYY KTRPECRPVQ NLLFSDCKLA
201: INDLPNFVYE IEWDVILIDG PSGYAGDSPG RMAPIFTSAV LAKSKDSGRK TKTTDVFVRE FGRKLERVYS DEFLCEENLI EVVGEIGHFV VAGGKGGKVK
301: KGNGFCRNST KLSEPFTPVS GGDED

Best Arabidopsis Sequence Match ( AT2G15440.1 )
(BLAST)

001: MKSNTNTNLI LFHHHSPLTS KSPSAVAAAN HHRFLFIFFL SFFTLLFSFS LFSSSIHSTT SSHSLSSSPS SSSLPPPVLA ALLHYTSSSP PNTSMSFLEL
101: STISNIIHSH GPACNLLIFG LTHESLLWRS INFQGRTVFV DESPYSVSKF EQSNPGVEAY EVVYSTKVSQ AKKLLGYYKT RPECRPVQNL LFSDCKLGIN
201: DLPNFVYEID WDVILIDGPR GYASDSPGRM APIFTSAVLA KSKDFGTKTK KTDVLVHEFG RKIERVYSEE FLCEENLIEV VGDLGHFVVA AAEERESYGD
301: GFCRNSTRLS ESFTAVSGGD EEKVGVDDE

Arabidopsis Description

At2g15440 [Source:UniProtKB/TrEMBL;Acc:Q9SJN8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.