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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 6
  • mitochondrion 1
  • nucleus 1
  • peroxisome 1
  • extracellular 1
  • golgi 1
  • plasma membrane 1
  • endoplasmic reticulum 1
  • vacuole 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:mitochondrion, nucleus, peroxisome, plastid, secretory
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:plastid
Plant-mPloc:nucleus, peroxisome, plastid
PProwler:secretory
TargetP:plastid
WoLF PSORT:plastid
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU0Hr1G015370.1 Barley cytosol, extracellular 50.51 82.85
TraesCS6A01G131900.1 Wheat mitochondrion 66.84 79.88
TraesCS6D01G121700.1 Wheat mitochondrion 66.58 79.82
OQU84413 Sorghum golgi, mitochondrion 63.52 77.81
TraesCS6B01G160200.1 Wheat mitochondrion 65.56 77.41
Zm00001d015307_P001 Maize golgi, mitochondrion, plastid 63.27 76.78
Os06t0687600-00 Rice golgi 56.12 65.48
GSMUA_Achr9P25260_001 Banana golgi 48.47 57.93
GSMUA_Achr8P03360_001 Banana golgi 45.66 54.57
GSMUA_Achr6P29610_001 Banana endoplasmic reticulum, golgi, plastid 44.64 53.68
GSMUA_Achr10P... Banana extracellular, plasma membrane, plastid 39.29 53.47
VIT_03s0063g00030.t01 Wine grape plastid 29.34 52.27
Os04t0649900-01 Rice mitochondrion 42.35 52.2
PGSC0003DMT400066571 Potato endoplasmic reticulum, golgi, mitochondrion, plastid 36.22 45.22
PGSC0003DMT400065494 Potato golgi, plasma membrane, plastid 34.44 44.7
VIT_07s0031g00110.t01 Wine grape golgi 35.2 44.52
KRH50341 Soybean golgi, plastid 35.2 44.37
Solyc01g107800.2.1 Tomato endoplasmic reticulum, golgi, mitochondrion, plastid 35.46 44.27
PGSC0003DMT400064322 Potato plastid 34.18 43.51
Solyc02g093090.1.1 Tomato extracellular, nucleus 33.93 43.18
CDX81329 Canola plastid 33.67 42.86
KRH70689 Soybean plastid 35.2 42.72
KRH77040 Soybean mitochondrion 32.91 42.43
KRH57814 Soybean mitochondrion 34.18 42.41
AT5G67210.1 Thale cress endoplasmic reticulum, golgi, mitochondrion, plastid 34.18 42.27
KRH28432 Soybean mitochondrion 33.16 42.21
Bra036059.1-P Field mustard endoplasmic reticulum, golgi, plastid 34.44 41.67
CDY17753 Canola endoplasmic reticulum, golgi 34.44 41.67
CDY30600 Canola endoplasmic reticulum, golgi 34.44 41.67
AT3G50220.1 Thale cress endoplasmic reticulum, golgi 34.18 41.61
Bra012143.1-P Field mustard plastid 33.42 41.59
CDY12819 Canola golgi, mitochondrion, plasma membrane, plastid 33.16 41.27
KRH04549 Soybean plastid 33.16 41.27
CDY01429 Canola golgi, mitochondrion, plasma membrane, plastid 32.91 40.95
Bra039840.1-P Field mustard plastid 30.87 37.23
CDY62313 Canola plastid 30.36 37.19
CDY13145 Canola plastid 30.87 36.89
Bra013107.1-P Field mustard plastid 30.87 36.89
CDX89660 Canola plastid 30.87 36.56
CDY37228 Canola plastid 30.1 36.53
Os12t0204500-01 Rice endoplasmic reticulum, golgi 26.79 35.59
AT2G15440.1 Thale cress plastid 29.59 35.26
Os11t0490100-01 Rice plasma membrane 27.04 35.1
Os11t0242600-00 Rice mitochondrion 24.74 30.7
Os11t0488500-01 Rice cytosol, nucleus 9.18 11.08
Protein Annotations
MapMan:35.1EntrezGene:4328366UniProt:A0A0P0VFA5ProteinID:BAS77079.1GO:GO:0005575GO:GO:0005975
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016020GO:GO:0016021
GO:GO:0045492InterPro:IRX15/IRX15L/IGXMEnsemblPlantsGene:Os02g0158500EnsemblPlants:Os02t0158500-00PFAM:PF04669PANTHER:PTHR31444
PANTHER:PTHR31444:SF19InterPro:Polysacc_synth_domTIGRFAMs:TIGR01627TMHMM:TMhelixUniParc:UPI000194F7E2RefSeq:XP_015627523.1
SEG:seg:::::
Description
cdc2 (cyclin-dependent kinase 2) -like geneUncharacterized plant-specific domain 01627 containing protein. (Os02t0158500-00)
Coordinates
chr2:-:3187973..3190043
Molecular Weight (calculated)
40727.7 Da
IEP (calculated)
8.616
GRAVY (calculated)
0.090
Length
392 amino acids
Sequence
(BLAST)
001: MQLSFTPSTH SRTQAQTVCV SVRQGGRRRG AKNCGGGGGG ERRKEMKGMS GPKLLVVHPA SKGYNGVVSL SGAASPGPSA ASMPLFLGSR RRCCAWLVAL
101: LLALLTCVSL LTVFSTARAA SEGAALPQRA RLTVAGAAGA AAASAAVGAA GGLPAYVFDA LVQYAAAAGA NATASMPEED VRAIASVLRR RAPCRLLVFG
201: LGAETPLWRA LNHGGRTVFL DENPFYVAHV EGALPGLEAY DVSYATAVRE FPDLLDAARA AQSADCRPVQ NLLFSDCRLA INDLPNQLYD VSWDVILVDG
301: PSGFTEGSPG RMSAIFSAAV MARTKGSETE VLVHDYQREV EIACAREFLC PENRVEATAT PSLGHFLVRG GAAANRDAFC GGAAGATTKK AN
Best Arabidopsis Sequence Match ( AT5G67210.1 )
(BLAST)
001: MKSGGNTNTK LILVHPYIQK QTSTNRLWLL AFVSFFTIAF LLTLLYTTDS IISSKNNSAT VSSAVNSAVT TATISQLPTT AINAMLHYAS RSNDSYHMSY
101: GEMKSISDVL RRCSPPCNLL VFGLTHETLL WKSLNHNGRT VFIEENRYYA AYFEEIHPEI EVFDVQYTTK AREARELVSA VKEAARNECR PVQNLLFSDC
201: KLGLNDLPNH VYDVDWDVIL VDGPRGDGGD VPGRMSSIFT AAVLARSKKG GNPKTHVFVH DYYRDVERLC GDEFLCRENL VESNDLLAHY VLEKMDKNST
301: QFCRGRKKKR SVSSPSA
Arabidopsis Description
IRX15-LIRX15-L [Source:UniProtKB/TrEMBL;Acc:A0A178UEM8]
SUBAcon: [golgi,plastid,endoplasmic reticulum,mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.