Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, golgi
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 3
- golgi 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d015307_P001 | Maize | golgi, mitochondrion, plastid | 91.25 | 90.4 |
| HORVU0Hr1G015370.1 | Barley | cytosol, extracellular | 61.88 | 82.85 |
| TraesCS6A01G131900.1 | Wheat | mitochondrion | 76.25 | 74.39 |
| TraesCS6D01G121700.1 | Wheat | mitochondrion | 75.62 | 74.01 |
| TraesCS6B01G160200.1 | Wheat | mitochondrion | 75.31 | 72.59 |
| EER88850 | Sorghum | plastid | 67.5 | 65.06 |
| Os02t0158500-00 | Rice | plastid | 77.81 | 63.52 |
| GSMUA_Achr9P25260_001 | Banana | golgi | 58.12 | 56.71 |
| GSMUA_Achr6P29610_001 | Banana | endoplasmic reticulum, golgi, plastid | 55.62 | 54.6 |
| VIT_03s0063g00030.t01 | Wine grape | plastid | 36.88 | 53.64 |
| GSMUA_Achr8P03360_001 | Banana | golgi | 54.06 | 52.74 |
| GSMUA_Achr10P... | Banana | extracellular, plasma membrane, plastid | 46.88 | 52.08 |
| KXG27192 | Sorghum | golgi, mitochondrion, plastid | 51.56 | 50.46 |
| PGSC0003DMT400066571 | Potato | endoplasmic reticulum, golgi, mitochondrion, plastid | 47.5 | 48.41 |
| Solyc01g107800.2.1 | Tomato | endoplasmic reticulum, golgi, mitochondrion, plastid | 46.88 | 47.77 |
| PGSC0003DMT400065494 | Potato | golgi, plasma membrane, plastid | 43.75 | 46.36 |
| VIT_07s0031g00110.t01 | Wine grape | golgi | 44.38 | 45.81 |
| KRH50341 | Soybean | golgi, plastid | 44.38 | 45.66 |
| KRH28432 | Soybean | mitochondrion | 43.75 | 45.45 |
| CDX81329 | Canola | plastid | 43.44 | 45.13 |
| KRH77040 | Soybean | mitochondrion | 42.81 | 45.07 |
| AT5G67210.1 | Thale cress | endoplasmic reticulum, golgi, mitochondrion, plastid | 44.38 | 44.8 |
| Bra012143.1-P | Field mustard | plastid | 44.06 | 44.76 |
| KRH70689 | Soybean | plastid | 45.0 | 44.58 |
| CDY12819 | Canola | golgi, mitochondrion, plasma membrane, plastid | 43.75 | 44.44 |
| PGSC0003DMT400064322 | Potato | plastid | 42.5 | 44.16 |
| CDY01429 | Canola | golgi, mitochondrion, plasma membrane, plastid | 43.44 | 44.13 |
| Solyc02g093090.1.1 | Tomato | extracellular, nucleus | 42.19 | 43.83 |
| AT3G50220.1 | Thale cress | endoplasmic reticulum, golgi | 44.06 | 43.79 |
| Bra036059.1-P | Field mustard | endoplasmic reticulum, golgi, plastid | 44.06 | 43.52 |
| CDY17753 | Canola | endoplasmic reticulum, golgi | 43.75 | 43.21 |
| CDY30600 | Canola | endoplasmic reticulum, golgi | 43.75 | 43.21 |
| KRH57814 | Soybean | mitochondrion | 41.56 | 42.09 |
| KRH04549 | Soybean | plastid | 40.62 | 41.27 |
| Bra039840.1-P | Field mustard | plastid | 39.06 | 38.46 |
| Bra013107.1-P | Field mustard | plastid | 39.38 | 38.41 |
| CDY13145 | Canola | plastid | 39.38 | 38.41 |
| CDX89660 | Canola | plastid | 39.38 | 38.07 |
| CDY62313 | Canola | plastid | 37.81 | 37.81 |
| CDY37228 | Canola | plastid | 37.81 | 37.46 |
| AT2G15440.1 | Thale cress | plastid | 37.19 | 36.17 |
| EES16857 | Sorghum | mitochondrion | 32.19 | 33.99 |
| OQU82596 | Sorghum | plastid | 27.81 | 30.07 |
| EES08266 | Sorghum | mitochondrion | 30.31 | 29.57 |
Protein Annotations
| EnsemblPlants:OQU84413 | EnsemblPlantsGene:SORBI_3004G047600 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0045492 | InterPro:IRX15/IRX15L/IGXM | InterPro:Polysacc_synth_dom | PANTHER:PTHR31444 | PANTHER:PTHR31444:SF19 |
| PFAM:PF04669 | ProteinID:OQU84413 | ProteinID:OQU84413.1 | SEG:seg | TIGRFAMs:TIGR01627 | TMHMM:TMhelix |
| UniParc:UPI000B8B99FA | UniProt:A0A1Z5RKZ0 | MapMan:35.1 | : | : | : |
Description
hypothetical protein
Coordinates
chr4:-:3864532..3866795
Molecular Weight (calculated)
34193.9 Da
IEP (calculated)
7.177
GRAVY (calculated)
0.051
Length
320 amino acids
Sequence
(BLAST)
(BLAST)
001: MKAMAGPKLL VVHTSSNKAL NGMAPASPMP FHGWSRCMWL VVFLALFTCV SLLTVFSTAR ASAGAAYQAA PFTASAGAAE AGLPRYVFDA LVHYAAAAGN
101: SSSSMPEPDV RAIASVLRRR APCNLLVFGL GAETPLWRAL NHGGRTVFLD ENPYYVAHLE GKHPGLEAYD VAYATAVREL PDLLDAARAA RAAECRPVQN
201: LLFSECRLAI NDLPNQLYDV AWDVILVDGP RGFTEGSPGR MSAIYSAAVM ARTKGTETEV MVHDYEREVE RACGREFLCD ENGVAATSTP SLGHFLVRGG
301: AAVNREAFCG PPAAQKSKSN
101: SSSSMPEPDV RAIASVLRRR APCNLLVFGL GAETPLWRAL NHGGRTVFLD ENPYYVAHLE GKHPGLEAYD VAYATAVREL PDLLDAARAA RAAECRPVQN
201: LLFSECRLAI NDLPNQLYDV AWDVILVDGP RGFTEGSPGR MSAIYSAAVM ARTKGTETEV MVHDYEREVE RACGREFLCD ENGVAATSTP SLGHFLVRGG
301: AAVNREAFCG PPAAQKSKSN
001: MKSGGNTNTK LILVHPYIQK QTSTNRLWLL AFVSFFTIAF LLTLLYTTDS IISSKNNSAT VSSAVNSAVT TATISQLPTT AINAMLHYAS RSNDSYHMSY
101: GEMKSISDVL RRCSPPCNLL VFGLTHETLL WKSLNHNGRT VFIEENRYYA AYFEEIHPEI EVFDVQYTTK AREARELVSA VKEAARNECR PVQNLLFSDC
201: KLGLNDLPNH VYDVDWDVIL VDGPRGDGGD VPGRMSSIFT AAVLARSKKG GNPKTHVFVH DYYRDVERLC GDEFLCRENL VESNDLLAHY VLEKMDKNST
301: QFCRGRKKKR SVSSPSA
101: GEMKSISDVL RRCSPPCNLL VFGLTHETLL WKSLNHNGRT VFIEENRYYA AYFEEIHPEI EVFDVQYTTK AREARELVSA VKEAARNECR PVQNLLFSDC
201: KLGLNDLPNH VYDVDWDVIL VDGPRGDGGD VPGRMSSIFT AAVLARSKKG GNPKTHVFVH DYYRDVERLC GDEFLCRENL VESNDLLAHY VLEKMDKNST
301: QFCRGRKKKR SVSSPSA
Arabidopsis Description
IRX15-LIRX15-L [Source:UniProtKB/TrEMBL;Acc:A0A178UEM8]
SUBAcon: [mitochondrion,endoplasmic reticulum,golgi,plastid]
SUBAcon: [mitochondrion,endoplasmic reticulum,golgi,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.