CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 3
mitochondrion 1
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	golgi, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d001763_P001	Maize	plasma membrane	87.5	92.17
TraesCS1D01G370900.1	Wheat	extracellular, plasma membrane	70.95	78.07
TraesCS1A01G365400.1	Wheat	golgi	72.3	77.54
TraesCS1B01G382900.1	Wheat	plasma membrane, vacuole	70.27	75.91
Solyc11g020540.1.1	Tomato	cytosol	10.47	46.27
GSMUA_Achr10P...	Banana	endoplasmic reticulum, extracellular, golgi	38.51	44.36
Bra013845.1-P	Field mustard	cytosol	24.66	40.78
GSMUA_Achr9P01440_001	Banana	golgi	35.14	39.69
CDX92660	Canola	plastid	37.5	35.58
KRH57238	Soybean	golgi	34.12	34.59
Bra019203.1-P	Field mustard	plastid	36.15	34.29
AT4G24910.1	Thale cress	plastid	36.49	34.29
CDY03407	Canola	plastid	35.81	34.08
Solyc11g020470.1.1	Tomato	cytosol	17.23	33.77
KRH63768	Soybean	plastid	32.77	33.22
CDY34323	Canola	plastid	34.46	33.01
KRH54181	Soybean	plastid	33.45	32.57
PGSC0003DMT400039556	Potato	golgi	29.39	32.34
KRH03967	Soybean	vacuole	35.81	32.02
EES16857	Sorghum	mitochondrion	29.73	29.04
Solyc03g110890.1.1	Tomato	plasma membrane, vacuole	29.39	28.9
OQU84413	Sorghum	golgi, mitochondrion	30.07	27.81
EER88850	Sorghum	plastid	30.07	26.81
KXG27192	Sorghum	golgi, mitochondrion, plastid	29.05	26.3
EES08266	Sorghum	mitochondrion	27.7	25.0
Os11t0488500-01	Rice	cytosol, nucleus	12.16	11.08

Protein Annotations

MapMan:35.2	UniProt:A0A1Z5RGV2	GO:GO:0005575	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0045492	InterPro:IRX15/IRX15L/IGXM
EnsemblPlants:OQU82596	ProteinID:OQU82596	ProteinID:OQU82596.1	PFAM:PF04669	PANTHER:PTHR31444	PANTHER:PTHR31444:SF7
InterPro:Polysacc_synth_dom	EnsemblPlantsGene:SORBI_3006G274500	TIGRFAMs:TIGR01627	TMHMM:TMhelix	UniParc:UPI000B8BB2CB	SEG:seg

Description

hypothetical protein

Coordinates

chr6:-:60576288..60577178

Molecular Weight (calculated)

30607.7 Da

IEP (calculated)

9.632

GRAVY (calculated)

0.163

Length

296 amino acids

Sequence
(BLAST)

001: MHLSGGGGGG AGSRMMPPKQ LLTIIIIIFS TLSFIKLLFL TSSSFSSAGS TSRSSPAWDA GSGGNGTARS ALAAKELALL RSVVTARAPC RLLVFGLSPQ
101: LLALAKLNSG AGAGATTAFV TDSADDADAA RHVLLSERGG AGSAAAVAVH RARYRDAAAE AWPLLRRARG SPACRRPTGT VRKSGCPLAL TSLPREVLDT
201: RWDVVVVDGP SGAAPEEPGR MGTIYTAAAL ARAVAGGEAV DVAVHDVDRT VERWYAWEYL CEDNLVAAKG RLWHFRIAAG AGPTDAFCSI GPVQIL

Best Arabidopsis Sequence Match ( AT4G24910.1 )
(BLAST)

001: MPPQFHQSSL SILNPLLRFS PPSSPDNPKH QRLSTIKMPK FTVRKLIPLL IFVLSSLSVL RLLRISYKSS SKSQSSSSTT FRLSPADSSQ QLRANEGPTA
101: LMEKELKLLS DTVTRRSPCN ILVFGFAPQY LMLSSINTRG ITVILEDEPA KIMIPKAEVN PNNTRIYSLK YHQMEVRNAY NLLQHARANP ACAPNMNNQH
201: QGSSDCKLEL RDLPQQVHNT KWDVIVVDGP RGDDLETPGR MGSIYTAAVL ARKGSSNSTT DVFVHDVHRT AEKWLSWEFL CQENLVSAKG TFWKFRIKRQ
301: SNASRFCSPE TVIIR

Arabidopsis Description

Glucuronoxylan 4-O-methyltransferase-like protein (DUF579) [Source:UniProtKB/TrEMBL;Acc:Q9SW35]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.