Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi, extracellular
Predictor Summary:
Predictor Summary:
- cytosol 1
- extracellular 5
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr9P01440_001 | Banana | golgi | 59.14 | 58.02 |
| Solyc11g020540.1.1 | Tomato | cytosol | 12.45 | 47.76 |
| Bra013845.1-P | Field mustard | cytosol | 33.07 | 47.49 |
| TraesCS1D01G370900.1 | Wheat | extracellular, plasma membrane | 44.36 | 42.38 |
| TraesCS1A01G365400.1 | Wheat | golgi | 44.75 | 41.67 |
| TraesCS1B01G382900.1 | Wheat | plasma membrane, vacuole | 44.36 | 41.61 |
| Zm00001d001763_P001 | Maize | plasma membrane | 43.97 | 40.21 |
| KRH63768 | Soybean | plastid | 45.53 | 40.07 |
| KRH57238 | Soybean | golgi | 45.53 | 40.07 |
| OQU82596 | Sorghum | plastid | 44.36 | 38.51 |
| KRH54181 | Soybean | plastid | 45.14 | 38.16 |
| Solyc11g020470.1.1 | Tomato | cytosol | 22.18 | 37.75 |
| KRH03967 | Soybean | vacuole | 47.08 | 36.56 |
| AT4G24910.1 | Thale cress | plastid | 44.75 | 36.51 |
| PGSC0003DMT400039556 | Potato | golgi | 37.74 | 36.06 |
| Bra019203.1-P | Field mustard | plastid | 43.58 | 35.9 |
| CDX92660 | Canola | plastid | 43.19 | 35.58 |
| CDY03407 | Canola | plastid | 42.8 | 35.37 |
| CDY34323 | Canola | plastid | 42.41 | 35.28 |
| Solyc03g110890.1.1 | Tomato | plasma membrane, vacuole | 36.97 | 31.56 |
| GSMUA_Achr8P29140_001 | Banana | endoplasmic reticulum, golgi | 34.24 | 31.54 |
| GSMUA_Achr3P19550_001 | Banana | mitochondrion | 34.24 | 30.66 |
| GSMUA_Achr9P01430_001 | Banana | extracellular | 34.24 | 30.56 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, golgi | 26.07 | 26.59 |
| GSMUA_Achr9P25260_001 | Banana | golgi | 33.85 | 26.52 |
| GSMUA_Achr8P03360_001 | Banana | golgi | 33.07 | 25.91 |
| GSMUA_Achr6P29610_001 | Banana | endoplasmic reticulum, golgi, plastid | 32.3 | 25.46 |
| GSMUA_Achr10P... | Banana | extracellular, plasma membrane, plastid | 28.02 | 25.0 |
| Os11t0488500-01 | Rice | cytosol, nucleus | 14.01 | 11.08 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr10P17000_001 | EnsemblPlants:GSMUA_Achr10T17000_001 | EnsemblPlantsGene:GSMUA_Achr10G17000_001 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045492 | InterPro:IRX15/IRX15L/IGXM | InterPro:Polysacc_synth_dom | PANTHER:PTHR31444 |
| PANTHER:PTHR31444:SF7 | PFAM:PF04669 | TIGRFAMs:TIGR01627 | TMHMM:TMhelix | UniParc:UPI0002966C88 | UniProt:M0RIX5 |
| MapMan:35.1 | : | : | : | : | : |
Description
Putative Predicted protein [Source:GMGC_GENE;Acc:GSMUA_Achr10G17000_001]
Coordinates
chr10:+:24358422..24360072
Molecular Weight (calculated)
28692.8 Da
IEP (calculated)
8.225
GRAVY (calculated)
-0.079
Length
257 amino acids
Sequence
(BLAST)
(BLAST)
001: MIPKKAIIVI LVIFSALSFL KLYTLAPTIS EYETPYVSHK ISHHDSLPTE DALGPKEYQL LSNLISRRAP CNLLFFGLKP QFLDLAALNT EGATIFLEDD
101: SEKLKTQLPK GIGIYLVKNH EKAGKGFELL EHARKHPSCR LQVGLITESG CKLALKGLPE VVYGRKWDVI VIDGPSGDQP EAPGRMGTIY TAARLARMGA
201: NADVFVHDTD RMIEKWYSWE FLCHENLVSS KGKLWHFRVA AHSGSDRFCS QSAVQIL
101: SEKLKTQLPK GIGIYLVKNH EKAGKGFELL EHARKHPSCR LQVGLITESG CKLALKGLPE VVYGRKWDVI VIDGPSGDQP EAPGRMGTIY TAARLARMGA
201: NADVFVHDTD RMIEKWYSWE FLCHENLVSS KGKLWHFRVA AHSGSDRFCS QSAVQIL
001: MPPQFHQSSL SILNPLLRFS PPSSPDNPKH QRLSTIKMPK FTVRKLIPLL IFVLSSLSVL RLLRISYKSS SKSQSSSSTT FRLSPADSSQ QLRANEGPTA
101: LMEKELKLLS DTVTRRSPCN ILVFGFAPQY LMLSSINTRG ITVILEDEPA KIMIPKAEVN PNNTRIYSLK YHQMEVRNAY NLLQHARANP ACAPNMNNQH
201: QGSSDCKLEL RDLPQQVHNT KWDVIVVDGP RGDDLETPGR MGSIYTAAVL ARKGSSNSTT DVFVHDVHRT AEKWLSWEFL CQENLVSAKG TFWKFRIKRQ
301: SNASRFCSPE TVIIR
101: LMEKELKLLS DTVTRRSPCN ILVFGFAPQY LMLSSINTRG ITVILEDEPA KIMIPKAEVN PNNTRIYSLK YHQMEVRNAY NLLQHARANP ACAPNMNNQH
201: QGSSDCKLEL RDLPQQVHNT KWDVIVVDGP RGDDLETPGR MGSIYTAAVL ARKGSSNSTT DVFVHDVHRT AEKWLSWEFL CQENLVSAKG TFWKFRIKRQ
301: SNASRFCSPE TVIIR
Arabidopsis Description
Glucuronoxylan 4-O-methyltransferase-like protein (DUF579) [Source:UniProtKB/TrEMBL;Acc:Q9SW35]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.