Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, vacuole
Predictor Summary:
Predictor Summary:
- plastid 2
- vacuole 3
- plasma membrane 4
- extracellular 2
- endoplasmic reticulum 2
- golgi 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400039556 | Potato | golgi | 85.38 | 95.54 |
| Solyc11g020540.1.1 | Tomato | cytosol | 20.6 | 92.54 |
| Solyc11g020470.1.1 | Tomato | cytosol | 43.52 | 86.75 |
| KRH57238 | Soybean | golgi | 41.86 | 43.15 |
| KRH54181 | Soybean | plastid | 43.52 | 43.09 |
| Bra013845.1-P | Field mustard | cytosol | 25.58 | 43.02 |
| KRH63768 | Soybean | plastid | 41.53 | 42.81 |
| AT4G24910.1 | Thale cress | plastid | 43.19 | 41.27 |
| KRH03967 | Soybean | vacuole | 44.85 | 40.79 |
| Bra019203.1-P | Field mustard | plastid | 41.53 | 40.06 |
| CDX92660 | Canola | plastid | 41.2 | 39.74 |
| CDY34323 | Canola | plastid | 39.87 | 38.84 |
| CDY03407 | Canola | plastid | 39.53 | 38.26 |
| GSMUA_Achr9P01440_001 | Banana | golgi | 32.89 | 37.79 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, extracellular, golgi | 31.56 | 36.97 |
| OQU82596 | Sorghum | plastid | 28.9 | 29.39 |
| Solyc01g103360.2.1 | Tomato | plasma membrane | 26.58 | 29.09 |
| Zm00001d001763_P001 | Maize | plasma membrane | 26.91 | 28.83 |
| Solyc07g015920.1.1 | Tomato | extracellular | 26.25 | 28.73 |
| TraesCS1D01G370900.1 | Wheat | extracellular, plasma membrane | 25.58 | 28.62 |
| Solyc06g064800.1.1 | Tomato | extracellular, golgi | 24.92 | 28.41 |
| TraesCS1B01G382900.1 | Wheat | plasma membrane, vacuole | 25.25 | 27.74 |
| Solyc11g031950.1.1 | Tomato | endoplasmic reticulum, plasma membrane, vacuole | 26.91 | 27.55 |
| TraesCS1A01G365400.1 | Wheat | golgi | 25.25 | 27.54 |
| Solyc01g107800.2.1 | Tomato | endoplasmic reticulum, golgi, mitochondrion, plastid | 25.25 | 24.2 |
| Solyc02g093090.1.1 | Tomato | extracellular, nucleus | 24.58 | 24.03 |
| Os11t0488500-01 | Rice | cytosol, nucleus | 10.3 | 9.54 |
Protein Annotations
| EnsemblPlants:Solyc03g110890.1.1 | EnsemblPlantsGene:Solyc03g110890.1 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0045492 | InterPro:IRX15/IRX15L/IGXM | InterPro:Polysacc_synth_dom | PANTHER:PTHR31444 | PANTHER:PTHR31444:SF7 |
| PFAM:PF04669 | SEG:seg | TIGRFAMs:TIGR01627 | UniParc:UPI0002768B2E | UniProt:K4BJV2 | MapMan:35.1 |
Description
No Description!
Coordinates
chr3:-:61616069..61616974
Molecular Weight (calculated)
34290.6 Da
IEP (calculated)
10.097
GRAVY (calculated)
-0.165
Length
301 amino acids
Sequence
(BLAST)
(BLAST)
001: MPSSEIAFPL LLFSPKTRLK KTLLHKYCIA MRFTKRNIIP LLVFILSFAS ILRLVKISVI TSYSSPIFSA LSLVEHSHNP LAEKEINFLY DLVSRKSPCN
101: ILVFGLETRY SSQISTINRG GFTVFLEDNP AKIKLYNSTS NADSTRIHRV EYQTVARDAY KILKHARQNQ KDCYISATAR PSSSKHDVHS NSSRKCKFMS
201: LVTNVPKEVY EVKWDLVIVD GPEGDKPESP GRMAAIYIAG VLARRSKNKN GTHVLVHDVD RMIEKWFSWE FLCDTNLFSS KGKFWDFNIL IKPNATTFCP
301: S
101: ILVFGLETRY SSQISTINRG GFTVFLEDNP AKIKLYNSTS NADSTRIHRV EYQTVARDAY KILKHARQNQ KDCYISATAR PSSSKHDVHS NSSRKCKFMS
201: LVTNVPKEVY EVKWDLVIVD GPEGDKPESP GRMAAIYIAG VLARRSKNKN GTHVLVHDVD RMIEKWFSWE FLCDTNLFSS KGKFWDFNIL IKPNATTFCP
301: S
001: MPPQFHQSSL SILNPLLRFS PPSSPDNPKH QRLSTIKMPK FTVRKLIPLL IFVLSSLSVL RLLRISYKSS SKSQSSSSTT FRLSPADSSQ QLRANEGPTA
101: LMEKELKLLS DTVTRRSPCN ILVFGFAPQY LMLSSINTRG ITVILEDEPA KIMIPKAEVN PNNTRIYSLK YHQMEVRNAY NLLQHARANP ACAPNMNNQH
201: QGSSDCKLEL RDLPQQVHNT KWDVIVVDGP RGDDLETPGR MGSIYTAAVL ARKGSSNSTT DVFVHDVHRT AEKWLSWEFL CQENLVSAKG TFWKFRIKRQ
301: SNASRFCSPE TVIIR
101: LMEKELKLLS DTVTRRSPCN ILVFGFAPQY LMLSSINTRG ITVILEDEPA KIMIPKAEVN PNNTRIYSLK YHQMEVRNAY NLLQHARANP ACAPNMNNQH
201: QGSSDCKLEL RDLPQQVHNT KWDVIVVDGP RGDDLETPGR MGSIYTAAVL ARKGSSNSTT DVFVHDVHRT AEKWLSWEFL CQENLVSAKG TFWKFRIKRQ
301: SNASRFCSPE TVIIR
Arabidopsis Description
Glucuronoxylan 4-O-methyltransferase-like protein (DUF579) [Source:UniProtKB/TrEMBL;Acc:Q9SW35]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.