Factsheet for AT4G24910.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra019203.1-P	Field mustard	plastid	80.0	80.77
Bra013845.1-P	Field mustard	cytosol	45.71	80.45
CDX92660	Canola	plastid	79.37	80.13
CDY03407	Canola	plastid	78.1	79.1
CDY34323	Canola	plastid	77.14	78.64
KRH57238	Soybean	golgi	44.44	47.95
Solyc11g020540.1.1	Tomato	cytosol	10.16	47.76
PGSC0003DMT400039556	Potato	golgi	39.68	46.47
KRH63768	Soybean	plastid	42.86	46.23
KRH54181	Soybean	plastid	43.49	45.07
GSMUA_Achr10P...	Banana	endoplasmic reticulum, extracellular, golgi	36.51	44.75
GSMUA_Achr9P01440_001	Banana	golgi	37.14	44.66
KRH03967	Soybean	vacuole	45.71	43.5
Solyc03g110890.1.1	Tomato	plasma membrane, vacuole	41.27	43.19
Solyc11g020470.1.1	Tomato	cytosol	20.0	41.72
OQU82596	Sorghum	plastid	34.29	36.49
Zm00001d001763_P001	Maize	plasma membrane	32.38	36.3
TraesCS1D01G370900.1	Wheat	extracellular, plasma membrane	30.48	35.69
TraesCS1A01G365400.1	Wheat	golgi	30.79	35.14
TraesCS1B01G382900.1	Wheat	plasma membrane, vacuole	30.48	35.04
AT1G09610.1	Thale cress	endoplasmic reticulum, golgi	27.3	30.5
AT5G67210.1	Thale cress	endoplasmic reticulum, golgi, mitochondrion, plastid	28.57	28.39
AT3G50220.1	Thale cress	endoplasmic reticulum, golgi	28.57	27.95
AT1G33800.1	Thale cress	golgi, plasma membrane	26.35	27.95
AT2G15440.1	Thale cress	plastid	28.89	27.66
AT4G09990.1	Thale cress	golgi	25.4	27.59
AT1G27930.1	Thale cress	endoplasmic reticulum, plasma membrane	24.76	26.99
AT1G67330.1	Thale cress	endoplasmic reticulum, golgi	24.44	26.46
AT1G71690.1	Thale cress	endoplasmic reticulum, golgi, plastid	24.76	26.44
Os11t0488500-01	Rice	cytosol, nucleus	12.38	12.0

Protein Annotations

MapMan:35.1	EntrezGene:828593	ProteinID:ABE65534.1	ProteinID:AEE84975.1	ArrayExpress:AT4G24910	EnsemblPlantsGene:AT4G24910
RefSeq:AT4G24910	TAIR:AT4G24910	RefSeq:AT4G24910-TAIR-G	EnsemblPlants:AT4G24910.1	TAIR:AT4G24910.1	ProteinID:CAB36733.1
ProteinID:CAB79400.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0008168	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740	GO:GO:0032259	GO:GO:0045492
InterPro:IRX15/IRX15L/IGXM	RefSeq:NP_194221.1	PFAM:PF04669	PO:PO:0000293	PANTHER:PTHR31444	PANTHER:PTHR31444:SF7
InterPro:Polysacc_synth_dom	UniProt:Q9SW35	TIGRFAMs:TIGR01627	UniParc:UPI00000A652C	SEG:seg	:

Description

Glucuronoxylan 4-O-methyltransferase-like protein (DUF579) [Source:UniProtKB/TrEMBL;Acc:Q9SW35]

Coordinates

chr4:-:12817727..12819206

Molecular Weight (calculated)

35550.8 Da

IEP (calculated)

10.382

GRAVY (calculated)

-0.375

Length

315 amino acids

Sequence
(BLAST)

001: MPPQFHQSSL SILNPLLRFS PPSSPDNPKH QRLSTIKMPK FTVRKLIPLL IFVLSSLSVL RLLRISYKSS SKSQSSSSTT FRLSPADSSQ QLRANEGPTA
101: LMEKELKLLS DTVTRRSPCN ILVFGFAPQY LMLSSINTRG ITVILEDEPA KIMIPKAEVN PNNTRIYSLK YHQMEVRNAY NLLQHARANP ACAPNMNNQH
201: QGSSDCKLEL RDLPQQVHNT KWDVIVVDGP RGDDLETPGR MGSIYTAAVL ARKGSSNSTT DVFVHDVHRT AEKWLSWEFL CQENLVSAKG TFWKFRIKRQ
301: SNASRFCSPE TVIIR

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.