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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 2
  • peroxisome 1
  • nucleus 1
  • mitochondrion 1
  • cytosol 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc11g020540.1.1 Tomato cytosol 41.72 94.03
PGSC0003DMT400039556 Potato golgi 84.77 47.58
Solyc03g110890.1.1 Tomato plasma membrane, vacuole 86.75 43.52
Bra013845.1-P Field mustard cytosol 40.4 34.08
KRH63768 Soybean plastid 48.34 25.0
KRH54181 Soybean plastid 49.01 24.34
KRH57238 Soybean golgi 47.02 24.32
GSMUA_Achr9P01440_001 Banana golgi 41.72 24.05
GSMUA_Achr10P... Banana endoplasmic reticulum, extracellular, golgi 37.75 22.18
KRH03967 Soybean vacuole 46.36 21.15
AT4G24910.1 Thale cress plastid 41.72 20.0
CDY03407 Canola plastid 41.06 19.94
CDY34323 Canola plastid 40.4 19.74
Bra019203.1-P Field mustard plastid 40.4 19.55
Solyc07g015920.1.1 Tomato extracellular 35.1 19.27
CDX92660 Canola plastid 39.74 19.23
Solyc06g064800.1.1 Tomato extracellular, golgi 31.79 18.18
Zm00001d001763_P001 Maize plasma membrane 33.77 18.15
TraesCS1D01G370900.1 Wheat extracellular, plasma membrane 31.79 17.84
TraesCS1B01G382900.1 Wheat plasma membrane, vacuole 31.79 17.52
TraesCS1A01G365400.1 Wheat golgi 31.79 17.39
OQU82596 Sorghum plastid 33.77 17.23
Solyc01g103360.2.1 Tomato plasma membrane 30.46 16.73
Solyc11g031950.1.1 Tomato endoplasmic reticulum, plasma membrane, vacuole 31.79 16.33
Solyc01g107800.2.1 Tomato endoplasmic reticulum, golgi, mitochondrion, plastid 31.13 14.97
Solyc02g093090.1.1 Tomato extracellular, nucleus 30.46 14.94
Os11t0488500-01 Rice cytosol, nucleus 11.92 5.54
Protein Annotations
EnsemblPlants:Solyc11g020470.1.1EnsemblPlantsGene:Solyc11g020470.1GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0009987GO:GO:0045492InterPro:IRX15/IRX15L/IGXMInterPro:Polysacc_synth_domPANTHER:PTHR31444PANTHER:PTHR31444:SF7
PFAM:PF04669SEG:segUniParc:UPI0002769504UniProt:K4D6Z9MapMan:35.1:
Description
No Description!
Coordinates
chr11:-:11130112..11130567
Molecular Weight (calculated)
17312.8 Da
IEP (calculated)
9.839
GRAVY (calculated)
-0.516
Length
151 amino acids
Sequence
(BLAST)
001: MYQTVARDAY NILKHARENQ KDCYISAIAR PSSSKHDVHS SSSRKCKFMS LATNVPKEVY EVKWDLVIAD GPEGDKPKSP GRMAAIYIVD VVARRRKKNN
101: GTHVLVHDVD RMIEKCFSWE FLCDTNLISS KGKFWDFNIL AKPNRTTFCR A
Best Arabidopsis Sequence Match ( AT4G24910.1 )
(BLAST)
001: MPPQFHQSSL SILNPLLRFS PPSSPDNPKH QRLSTIKMPK FTVRKLIPLL IFVLSSLSVL RLLRISYKSS SKSQSSSSTT FRLSPADSSQ QLRANEGPTA
101: LMEKELKLLS DTVTRRSPCN ILVFGFAPQY LMLSSINTRG ITVILEDEPA KIMIPKAEVN PNNTRIYSLK YHQMEVRNAY NLLQHARANP ACAPNMNNQH
201: QGSSDCKLEL RDLPQQVHNT KWDVIVVDGP RGDDLETPGR MGSIYTAAVL ARKGSSNSTT DVFVHDVHRT AEKWLSWEFL CQENLVSAKG TFWKFRIKRQ
301: SNASRFCSPE TVIIR
Arabidopsis Description
Glucuronoxylan 4-O-methyltransferase-like protein (DUF579) [Source:UniProtKB/TrEMBL;Acc:Q9SW35]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.