Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- peroxisome 1
- nucleus 1
- mitochondrion 1
- cytosol 2
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Solyc11g020540.1.1 | Tomato | cytosol | 41.72 | 94.03 |
PGSC0003DMT400039556 | Potato | golgi | 84.77 | 47.58 |
Solyc03g110890.1.1 | Tomato | plasma membrane, vacuole | 86.75 | 43.52 |
Bra013845.1-P | Field mustard | cytosol | 40.4 | 34.08 |
KRH63768 | Soybean | plastid | 48.34 | 25.0 |
KRH54181 | Soybean | plastid | 49.01 | 24.34 |
KRH57238 | Soybean | golgi | 47.02 | 24.32 |
GSMUA_Achr9P01440_001 | Banana | golgi | 41.72 | 24.05 |
GSMUA_Achr10P... | Banana | endoplasmic reticulum, extracellular, golgi | 37.75 | 22.18 |
KRH03967 | Soybean | vacuole | 46.36 | 21.15 |
AT4G24910.1 | Thale cress | plastid | 41.72 | 20.0 |
CDY03407 | Canola | plastid | 41.06 | 19.94 |
CDY34323 | Canola | plastid | 40.4 | 19.74 |
Bra019203.1-P | Field mustard | plastid | 40.4 | 19.55 |
Solyc07g015920.1.1 | Tomato | extracellular | 35.1 | 19.27 |
CDX92660 | Canola | plastid | 39.74 | 19.23 |
Solyc06g064800.1.1 | Tomato | extracellular, golgi | 31.79 | 18.18 |
Zm00001d001763_P001 | Maize | plasma membrane | 33.77 | 18.15 |
TraesCS1D01G370900.1 | Wheat | extracellular, plasma membrane | 31.79 | 17.84 |
TraesCS1B01G382900.1 | Wheat | plasma membrane, vacuole | 31.79 | 17.52 |
TraesCS1A01G365400.1 | Wheat | golgi | 31.79 | 17.39 |
OQU82596 | Sorghum | plastid | 33.77 | 17.23 |
Solyc01g103360.2.1 | Tomato | plasma membrane | 30.46 | 16.73 |
Solyc11g031950.1.1 | Tomato | endoplasmic reticulum, plasma membrane, vacuole | 31.79 | 16.33 |
Solyc01g107800.2.1 | Tomato | endoplasmic reticulum, golgi, mitochondrion, plastid | 31.13 | 14.97 |
Solyc02g093090.1.1 | Tomato | extracellular, nucleus | 30.46 | 14.94 |
Os11t0488500-01 | Rice | cytosol, nucleus | 11.92 | 5.54 |
Protein Annotations
EnsemblPlants:Solyc11g020470.1.1 | EnsemblPlantsGene:Solyc11g020470.1 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
GO:GO:0009987 | GO:GO:0045492 | InterPro:IRX15/IRX15L/IGXM | InterPro:Polysacc_synth_dom | PANTHER:PTHR31444 | PANTHER:PTHR31444:SF7 |
PFAM:PF04669 | SEG:seg | UniParc:UPI0002769504 | UniProt:K4D6Z9 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr11:-:11130112..11130567
Molecular Weight (calculated)
17312.8 Da
IEP (calculated)
9.839
GRAVY (calculated)
-0.516
Length
151 amino acids
Sequence
(BLAST)
(BLAST)
001: MYQTVARDAY NILKHARENQ KDCYISAIAR PSSSKHDVHS SSSRKCKFMS LATNVPKEVY EVKWDLVIAD GPEGDKPKSP GRMAAIYIVD VVARRRKKNN
101: GTHVLVHDVD RMIEKCFSWE FLCDTNLISS KGKFWDFNIL AKPNRTTFCR A
101: GTHVLVHDVD RMIEKCFSWE FLCDTNLISS KGKFWDFNIL AKPNRTTFCR A
001: MPPQFHQSSL SILNPLLRFS PPSSPDNPKH QRLSTIKMPK FTVRKLIPLL IFVLSSLSVL RLLRISYKSS SKSQSSSSTT FRLSPADSSQ QLRANEGPTA
101: LMEKELKLLS DTVTRRSPCN ILVFGFAPQY LMLSSINTRG ITVILEDEPA KIMIPKAEVN PNNTRIYSLK YHQMEVRNAY NLLQHARANP ACAPNMNNQH
201: QGSSDCKLEL RDLPQQVHNT KWDVIVVDGP RGDDLETPGR MGSIYTAAVL ARKGSSNSTT DVFVHDVHRT AEKWLSWEFL CQENLVSAKG TFWKFRIKRQ
301: SNASRFCSPE TVIIR
101: LMEKELKLLS DTVTRRSPCN ILVFGFAPQY LMLSSINTRG ITVILEDEPA KIMIPKAEVN PNNTRIYSLK YHQMEVRNAY NLLQHARANP ACAPNMNNQH
201: QGSSDCKLEL RDLPQQVHNT KWDVIVVDGP RGDDLETPGR MGSIYTAAVL ARKGSSNSTT DVFVHDVHRT AEKWLSWEFL CQENLVSAKG TFWKFRIKRQ
301: SNASRFCSPE TVIIR
Arabidopsis Description
Glucuronoxylan 4-O-methyltransferase-like protein (DUF579) [Source:UniProtKB/TrEMBL;Acc:Q9SW35]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.