Factsheet for Bra019203.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
endoplasmic reticulum 1
nucleus 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX92660	Canola	plastid	91.67	91.67
Bra013845.1-P	Field mustard	cytosol	48.4	84.36
AT4G24910.1	Thale cress	plastid	80.77	80.0
Solyc11g020540.1.1	Tomato	cytosol	10.9	50.75
KRH57238	Soybean	golgi	42.95	45.89
KRH63768	Soybean	plastid	41.67	44.52
KRH54181	Soybean	plastid	42.63	43.75
GSMUA_Achr10P...	Banana	endoplasmic reticulum, extracellular, golgi	35.9	43.58
PGSC0003DMT400039556	Potato	golgi	37.5	43.49
GSMUA_Achr9P01440_001	Banana	golgi	35.58	42.37
KRH03967	Soybean	vacuole	44.87	42.3
Solyc03g110890.1.1	Tomato	plasma membrane, vacuole	40.06	41.53
Solyc11g020470.1.1	Tomato	cytosol	19.55	40.4
Zm00001d001763_P001	Maize	plasma membrane	32.69	36.3
OQU82596	Sorghum	plastid	34.29	36.15
TraesCS1D01G370900.1	Wheat	extracellular, plasma membrane	29.81	34.57
TraesCS1A01G365400.1	Wheat	golgi	30.13	34.06
TraesCS1B01G382900.1	Wheat	plasma membrane, vacuole	29.81	33.94
Bra030789.1-P	Field mustard	endoplasmic reticulum, golgi	25.96	28.83
Bra032854.1-P	Field mustard	endoplasmic reticulum	26.6	28.72
Bra004093.1-P	Field mustard	endoplasmic reticulum, golgi	26.6	28.52
Bra030066.1-P	Field mustard	endoplasmic reticulum, plasma membrane	26.28	28.37
Bra034005.1-P	Field mustard	endoplasmic reticulum, golgi	25.96	28.12
Bra013107.1-P	Field mustard	plastid	29.49	28.05
Bra039840.1-P	Field mustard	plastid	29.17	28.0
Bra034460.1-P	Field mustard	golgi, plasma membrane, vacuole	25.96	27.27
Bra036059.1-P	Field mustard	endoplasmic reticulum, golgi, plastid	28.21	27.16
Bra012143.1-P	Field mustard	plastid	27.24	26.98
Bra028013.1-P	Field mustard	golgi	24.36	25.68
Bra016131.1-P	Field mustard	endoplasmic reticulum, extracellular	24.04	25.34
Os11t0488500-01	Rice	cytosol, nucleus	11.54	11.08

Protein Annotations

EnsemblPlants:Bra019203.1	EnsemblPlants:Bra019203.1-P	EnsemblPlantsGene:Bra019203	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0045492	InterPro:IRX15/IRX15L/IGXM	InterPro:Polysacc_synth_dom	PANTHER:PTHR31444
PANTHER:PTHR31444:SF7	PFAM:PF04669	SEG:seg	TIGRFAMs:TIGR01627	UniParc:UPI000254104A	UniProt:M4DRR0
MapMan:35.1	:	:	:	:	:

Description

AT4G24910 (E=3e-109) | unknown protein

Coordinates

chrA03:-:25717725..25718663

Molecular Weight (calculated)

34982.1 Da

IEP (calculated)

10.285

GRAVY (calculated)

-0.324

Length

312 amino acids

Sequence
(BLAST)

001: MPPHLHQSSL PILNPLLRFS PPSSPDTPKH KRESKITMPK FTVRKLIPLL IFVLSSLSVI RLLRISLKSS SSASHSLSST TFRSEFSQQI SANASQSALT
101: EKELKLLSDT ITSRPPCNVL VFGFAPHYLK LSSINTRGIT VILEDEQSKS KAEVNPNNTR IYSLKYHQME VKNVYKLLRH ARANPACAAP NTNTLHQGSS
201: ECKLKLKDLP QEVYNTKWDV IVVDGPRGDD LEAPGRMGSI YTAAVLAIQG SSNSTTYVLV HDVQRTVEKW LSWEFLCQEN QVSAKGNFWK FRIKGRSNAS
301: RFCSPETALI RY

Best Arabidopsis Sequence Match ( AT4G24910.1 )
(BLAST)

001: MPPQFHQSSL SILNPLLRFS PPSSPDNPKH QRLSTIKMPK FTVRKLIPLL IFVLSSLSVL RLLRISYKSS SKSQSSSSTT FRLSPADSSQ QLRANEGPTA
101: LMEKELKLLS DTVTRRSPCN ILVFGFAPQY LMLSSINTRG ITVILEDEPA KIMIPKAEVN PNNTRIYSLK YHQMEVRNAY NLLQHARANP ACAPNMNNQH
201: QGSSDCKLEL RDLPQQVHNT KWDVIVVDGP RGDDLETPGR MGSIYTAAVL ARKGSSNSTT DVFVHDVHRT AEKWLSWEFL CQENLVSAKG TFWKFRIKRQ
301: SNASRFCSPE TVIIR

Arabidopsis Description

Glucuronoxylan 4-O-methyltransferase-like protein (DUF579) [Source:UniProtKB/TrEMBL;Acc:Q9SW35]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.