Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
- endoplasmic reticulum 4
- extracellular 3
- vacuole 3
- plasma membrane 4
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra032854.1-P | Field mustard | endoplasmic reticulum | 91.35 | 91.35 |
| AT1G27930.1 | Thale cress | endoplasmic reticulum, plasma membrane | 87.54 | 87.54 |
| Bra034005.1-P | Field mustard | endoplasmic reticulum, golgi | 64.36 | 64.58 |
| Bra004093.1-P | Field mustard | endoplasmic reticulum, golgi | 64.71 | 64.26 |
| KRH58773 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 59.86 | 62.45 |
| VIT_01s0010g03680.t01 | Wine grape | endoplasmic reticulum, golgi | 60.55 | 62.28 |
| KRH42675 | Soybean | endoplasmic reticulum | 60.55 | 61.19 |
| KRH31488 | Soybean | endoplasmic reticulum, golgi | 59.86 | 60.92 |
| VIT_14s0068g01970.t01 | Wine grape | endoplasmic reticulum, plasma membrane | 59.17 | 60.64 |
| KRG97408 | Soybean | plastid | 60.9 | 55.0 |
| PGSC0003DMT400084744 | Potato | endoplasmic reticulum | 53.63 | 54.96 |
| GSMUA_Achr3P19550_001 | Banana | mitochondrion | 51.9 | 52.26 |
| PGSC0003DMT400077009 | Potato | extracellular | 48.44 | 50.91 |
| Solyc07g015920.1.1 | Tomato | extracellular | 48.1 | 50.55 |
| GSMUA_Achr9P01430_001 | Banana | extracellular | 49.48 | 49.65 |
| TraesCS3B01G545900.1 | Wheat | extracellular | 48.44 | 47.78 |
| TraesCS3D01G492500.1 | Wheat | extracellular | 48.1 | 47.6 |
| HORVU3Hr1G108120.1 | Barley | extracellular, plasma membrane, vacuole | 48.1 | 47.6 |
| TraesCS2B01G398500.1 | Wheat | extracellular | 47.75 | 46.78 |
| TraesCS2D01G377700.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 47.75 | 46.78 |
| TraesCS2A01G381200.1 | Wheat | extracellular | 47.4 | 46.44 |
| Zm00001d007327_P001 | Maize | plasma membrane | 48.79 | 45.93 |
| Os11t0490100-01 | Rice | plasma membrane | 46.71 | 44.7 |
| Bra030789.1-P | Field mustard | endoplasmic reticulum, golgi | 40.14 | 41.28 |
| Bra028013.1-P | Field mustard | golgi | 41.18 | 40.2 |
| HORVU2Hr1G089430.1 | Barley | endoplasmic reticulum, peroxisome, plastid | 47.06 | 40.0 |
| Bra034460.1-P | Field mustard | golgi, plasma membrane, vacuole | 40.14 | 39.06 |
| Bra013845.1-P | Field mustard | cytosol | 23.18 | 37.43 |
| Bra016131.1-P | Field mustard | endoplasmic reticulum, extracellular | 37.72 | 36.82 |
| Bra036059.1-P | Field mustard | endoplasmic reticulum, golgi, plastid | 29.76 | 26.54 |
| Bra012143.1-P | Field mustard | plastid | 28.72 | 26.35 |
| Bra019203.1-P | Field mustard | plastid | 28.37 | 26.28 |
| Bra013107.1-P | Field mustard | plastid | 29.41 | 25.91 |
| Bra039840.1-P | Field mustard | plastid | 29.07 | 25.85 |
Protein Annotations
| EnsemblPlants:Bra030066.1 | EnsemblPlants:Bra030066.1-P | EnsemblPlantsGene:Bra030066 | GO:GO:0005575 | GO:GO:0005975 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0045492 |
| InterPro:IRX15/IRX15L/IGXM | InterPro:Polysacc_synth_dom | PANTHER:PTHR31444 | PANTHER:PTHR31444:SF1 | PFAM:PF04669 | SEG:seg |
| TIGRFAMs:TIGR01627 | TMHMM:TMhelix | UniParc:UPI0002541137 | UniProt:M4EMP6 | MapMan:35.1 | : |
Description
AT1G27930 (E=7e-140) | unknown protein
Coordinates
chrA07:+:6836358..6837227
Molecular Weight (calculated)
32323.9 Da
IEP (calculated)
8.465
GRAVY (calculated)
0.002
Length
289 amino acids
Sequence
(BLAST)
(BLAST)
001: MSNIIPSEKR SIITFVLLAG LIGSALLFTS FIRSADDAFF LCPTTSAKSR AVAAAADYSA TPIQLQAIVH YATSTITPQQ NIHEISISFN VLKELAPANF
101: LVFGLGLDSL MWASLNPRGK TIFLEEDLEW FQKVTKDAPF LHAHHVRYRT QLQEADKLLR SYKTEPSCFP AKAYLRGNER CKLALTGLPD EFYDTEWDLI
201: MLDAPKGYFA EAPGRMAAIF SAAVMARNRK KPGVTHVFLH DVNRRVEKTF AEEFLCAKYR VHAAGRLWHF AIPPVAANAT IDGGDYRFC
101: LVFGLGLDSL MWASLNPRGK TIFLEEDLEW FQKVTKDAPF LHAHHVRYRT QLQEADKLLR SYKTEPSCFP AKAYLRGNER CKLALTGLPD EFYDTEWDLI
201: MLDAPKGYFA EAPGRMAAIF SAAVMARNRK KPGVTHVFLH DVNRRVEKTF AEEFLCAKYR VHAAGRLWHF AIPPVAANAT IDGGDYRFC
001: MNTLIPSEKR WIITGVLLAG LVGGALLFTS FIRAADETLF LCSTASAKSR AVAAAADYEA TPIQLQAIVH YATSNVVPQQ NLAEISISFN ILKKLAPANF
101: LVFGLGRDSL MWASLNPRGK TLFLEEDLEW FQKVTKDSPF LRAHHVRYRT QLQQADSLLR SYKTEPKCFP AKSYLRGNEK CKLALTGLPD EFYDTEWDLL
201: MVDAPKGYFA EAPGRMAAIF SAAVMARNRK KPGVTHVFLH DVNRRVEKTF AEEFLCRKYR VNAAGRLWHF AIPPAAANAT IDSGDYRFC
101: LVFGLGRDSL MWASLNPRGK TLFLEEDLEW FQKVTKDSPF LRAHHVRYRT QLQQADSLLR SYKTEPKCFP AKSYLRGNEK CKLALTGLPD EFYDTEWDLL
201: MVDAPKGYFA EAPGRMAAIF SAAVMARNRK KPGVTHVFLH DVNRRVEKTF AEEFLCRKYR VNAAGRLWHF AIPPAAANAT IDSGDYRFC
Arabidopsis Description
Probable methyltransferase At1g27930 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7F9]
SUBAcon: [endoplasmic reticulum,plasma membrane]
SUBAcon: [endoplasmic reticulum,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.