Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 1
- extracellular 3
- golgi 3
- plasma membrane 4
- endoplasmic reticulum 4
- vacuole 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_01s0010g03680.t01 | Wine grape | endoplasmic reticulum, golgi | 68.09 | 68.33 |
| KRH58773 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 61.35 | 62.45 |
| KRH31488 | Soybean | endoplasmic reticulum, golgi | 61.7 | 61.27 |
| KRH42675 | Soybean | endoplasmic reticulum | 60.64 | 59.79 |
| AT1G27930.1 | Thale cress | endoplasmic reticulum, plasma membrane | 60.64 | 59.17 |
| Bra030066.1-P | Field mustard | endoplasmic reticulum, plasma membrane | 60.64 | 59.17 |
| Bra032854.1-P | Field mustard | endoplasmic reticulum | 60.28 | 58.82 |
| CDX84898 | Canola | endoplasmic reticulum | 60.28 | 58.82 |
| CDY27638 | Canola | endoplasmic reticulum | 60.28 | 58.82 |
| PGSC0003DMT400084744 | Potato | endoplasmic reticulum | 57.45 | 57.45 |
| AT1G67330.1 | Thale cress | endoplasmic reticulum, golgi | 59.22 | 57.39 |
| Bra034005.1-P | Field mustard | endoplasmic reticulum, golgi | 58.16 | 56.94 |
| CDY28894 | Canola | endoplasmic reticulum, golgi | 58.51 | 56.7 |
| CDY12639 | Canola | endoplasmic reticulum, golgi | 57.8 | 56.6 |
| Bra004093.1-P | Field mustard | endoplasmic reticulum, golgi | 57.8 | 56.01 |
| CDY07428 | Canola | endoplasmic reticulum, golgi | 57.8 | 56.01 |
| KRG97408 | Soybean | plastid | 62.77 | 55.31 |
| CDY51186 | Canola | endoplasmic reticulum, plasma membrane | 57.8 | 55.25 |
| Solyc07g015920.1.1 | Tomato | extracellular | 52.13 | 53.45 |
| PGSC0003DMT400077009 | Potato | extracellular | 51.42 | 52.73 |
| GSMUA_Achr3P19550_001 | Banana | mitochondrion | 53.19 | 52.26 |
| GSMUA_Achr9P01430_001 | Banana | extracellular | 51.77 | 50.69 |
| TraesCS3D01G492500.1 | Wheat | extracellular | 48.58 | 46.92 |
| TraesCS3B01G545900.1 | Wheat | extracellular | 48.23 | 46.42 |
| HORVU3Hr1G108120.1 | Barley | extracellular, plasma membrane, vacuole | 47.87 | 46.23 |
| TraesCS2B01G398500.1 | Wheat | extracellular | 47.87 | 45.76 |
| Os11t0490100-01 | Rice | plasma membrane | 48.94 | 45.7 |
| Zm00001d007327_P001 | Maize | plasma membrane | 49.29 | 45.28 |
| TraesCS2D01G377700.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 46.81 | 44.75 |
| TraesCS2A01G381200.1 | Wheat | extracellular | 46.81 | 44.75 |
| VIT_12s0035g01340.t01 | Wine grape | golgi | 42.2 | 41.9 |
| VIT_12s0035g01170.t01 | Wine grape | endoplasmic reticulum, golgi, vacuole | 41.49 | 40.34 |
| VIT_03s0063g00030.t01 | Wine grape | plastid | 30.5 | 39.09 |
| HORVU2Hr1G089430.1 | Barley | endoplasmic reticulum, peroxisome, plastid | 46.1 | 38.24 |
| VIT_00s0238g00020.t01 | Wine grape | extracellular, plasma membrane | 39.36 | 37.0 |
| VIT_00s0238g00030.t01 | Wine grape | extracellular, plasma membrane | 29.08 | 33.88 |
| VIT_07s0031g00110.t01 | Wine grape | golgi | 34.75 | 31.61 |
Protein Annotations
| EntrezGene:100265182 | wikigene:100265182 | MapMan:35.1 | ProteinID:CCB47015 | ProteinID:CCB47015.1 | UniProt:F6H3X5 |
| EMBL:FN595232 | GO:GO:0005575 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0045492 | InterPro:IRX15/IRX15L/IGXM | EntrezGene:LOC100265182 |
| wikigene:LOC100265182 | PFAM:PF04669 | PANTHER:PTHR31444 | PANTHER:PTHR31444:SF1 | InterPro:Polysacc_synth_dom | TIGR:TC67302 |
| TIGRFAMs:TIGR01627 | TMHMM:TMhelix | UniParc:UPI00015C83BC | ArrayExpress:VIT_14s0068g01970 | EnsemblPlantsGene:VIT_14s0068g01970 | EnsemblPlants:VIT_14s0068g01970.t01 |
| unigene:Vvi.18963 | RefSeq:XP_002274054 | RefSeq:XP_002274054.1 | : | : | : |
Description
No Description!
Coordinates
chr14:+:25633234..25634255
Molecular Weight (calculated)
31674.2 Da
IEP (calculated)
8.370
GRAVY (calculated)
-0.088
Length
282 amino acids
Sequence
(BLAST)
(BLAST)
001: MKNRRVLFER PWLLTVVIGG MIGAAILINS FGRTSSNSLL CSFSGAYTRP DHSDDSVAQT QLIAILHYAT SRVVPQQSLA EIRVSFDVLQ SLAPCNFLVY
101: GLGHDSVMWS SFNPKGTTIF LEEDPKWVQT VLKQAPNLLA HTVRYRTHLS EADQLLRSYK SEPACLPPDV RLRDNTACRL ALTGLPEEVY DTEWDLIMID
201: APRGYFPEAP GRMGAIFTAA VMARARKRQG VTHVFLHDVN RRIEKVYAEE FLCKKNLVKA EGRLWHFAIP SAANDTMNSA FC
101: GLGHDSVMWS SFNPKGTTIF LEEDPKWVQT VLKQAPNLLA HTVRYRTHLS EADQLLRSYK SEPACLPPDV RLRDNTACRL ALTGLPEEVY DTEWDLIMID
201: APRGYFPEAP GRMGAIFTAA VMARARKRQG VTHVFLHDVN RRIEKVYAEE FLCKKNLVKA EGRLWHFAIP SAANDTMNSA FC
001: MNTLIPSEKR WIITGVLLAG LVGGALLFTS FIRAADETLF LCSTASAKSR AVAAAADYEA TPIQLQAIVH YATSNVVPQQ NLAEISISFN ILKKLAPANF
101: LVFGLGRDSL MWASLNPRGK TLFLEEDLEW FQKVTKDSPF LRAHHVRYRT QLQQADSLLR SYKTEPKCFP AKSYLRGNEK CKLALTGLPD EFYDTEWDLL
201: MVDAPKGYFA EAPGRMAAIF SAAVMARNRK KPGVTHVFLH DVNRRVEKTF AEEFLCRKYR VNAAGRLWHF AIPPAAANAT IDSGDYRFC
101: LVFGLGRDSL MWASLNPRGK TLFLEEDLEW FQKVTKDSPF LRAHHVRYRT QLQQADSLLR SYKTEPKCFP AKSYLRGNEK CKLALTGLPD EFYDTEWDLL
201: MVDAPKGYFA EAPGRMAAIF SAAVMARNRK KPGVTHVFLH DVNRRVEKTF AEEFLCRKYR VNAAGRLWHF AIPPAAANAT IDSGDYRFC
Arabidopsis Description
Probable methyltransferase At1g27930 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7F9]
SUBAcon: [plasma membrane,endoplasmic reticulum]
SUBAcon: [plasma membrane,endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.