Subcellular Localization
min:
: max
Winner_takes_all: golgi, endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 4
- golgi 5
- plasma membrane 4
- endoplasmic reticulum 5
- vacuole 4
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_14s0068g01970.t01 | Wine grape | endoplasmic reticulum, plasma membrane | 68.33 | 68.09 |
| KRH42675 | Soybean | endoplasmic reticulum | 65.48 | 64.34 |
| KRH58773 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 63.35 | 64.26 |
| KRH31488 | Soybean | endoplasmic reticulum, golgi | 64.06 | 63.38 |
| AT1G27930.1 | Thale cress | endoplasmic reticulum, plasma membrane | 63.7 | 61.94 |
| Bra034005.1-P | Field mustard | endoplasmic reticulum, golgi | 62.99 | 61.46 |
| CDX84898 | Canola | endoplasmic reticulum | 62.99 | 61.25 |
| CDY27638 | Canola | endoplasmic reticulum | 62.99 | 61.25 |
| Bra032854.1-P | Field mustard | endoplasmic reticulum | 62.99 | 61.25 |
| CDY12639 | Canola | endoplasmic reticulum, golgi | 62.63 | 61.11 |
| CDY28894 | Canola | endoplasmic reticulum, golgi | 62.99 | 60.82 |
| PGSC0003DMT400084744 | Potato | endoplasmic reticulum | 60.85 | 60.64 |
| Bra030066.1-P | Field mustard | endoplasmic reticulum, plasma membrane | 62.28 | 60.55 |
| CDY07428 | Canola | endoplasmic reticulum, golgi | 62.28 | 60.14 |
| Bra004093.1-P | Field mustard | endoplasmic reticulum, golgi | 62.28 | 60.14 |
| CDY51186 | Canola | endoplasmic reticulum, plasma membrane | 62.99 | 60.0 |
| AT1G67330.1 | Thale cress | endoplasmic reticulum, golgi | 61.92 | 59.79 |
| KRG97408 | Soybean | plastid | 64.77 | 56.88 |
| PGSC0003DMT400077009 | Potato | extracellular | 54.45 | 55.64 |
| Solyc07g015920.1.1 | Tomato | extracellular | 54.09 | 55.27 |
| GSMUA_Achr3P19550_001 | Banana | mitochondrion | 54.09 | 52.96 |
| GSMUA_Achr9P01430_001 | Banana | extracellular | 52.67 | 51.39 |
| TraesCS3D01G492500.1 | Wheat | extracellular | 47.33 | 45.55 |
| HORVU3Hr1G108120.1 | Barley | extracellular, plasma membrane, vacuole | 46.98 | 45.21 |
| TraesCS3B01G545900.1 | Wheat | extracellular | 46.98 | 45.05 |
| TraesCS2B01G398500.1 | Wheat | extracellular | 46.26 | 44.07 |
| Os11t0490100-01 | Rice | plasma membrane | 47.33 | 44.04 |
| Zm00001d007327_P001 | Maize | plasma membrane | 47.69 | 43.65 |
| TraesCS2D01G377700.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 45.55 | 43.39 |
| TraesCS2A01G381200.1 | Wheat | extracellular | 45.2 | 43.05 |
| VIT_12s0035g01340.t01 | Wine grape | golgi | 40.57 | 40.14 |
| VIT_12s0035g01170.t01 | Wine grape | endoplasmic reticulum, golgi, vacuole | 40.57 | 39.31 |
| VIT_00s0238g00020.t01 | Wine grape | extracellular, plasma membrane | 40.57 | 38.0 |
| HORVU2Hr1G089430.1 | Barley | endoplasmic reticulum, peroxisome, plastid | 44.48 | 36.76 |
| VIT_03s0063g00030.t01 | Wine grape | plastid | 28.47 | 36.36 |
| VIT_00s0238g00030.t01 | Wine grape | extracellular, plasma membrane | 29.89 | 34.71 |
| VIT_07s0031g00110.t01 | Wine grape | golgi | 33.45 | 30.32 |
Protein Annotations
| EntrezGene:100253955 | wikigene:100253955 | MapMan:35.1 | EMBL:AM446463 | ProteinID:CAN63149 | ProteinID:CAN63149.1 |
| ProteinID:CCB51303 | ProteinID:CCB51303.1 | UniProt:F6HGB0 | EMBL:FN595754 | GO:GO:0005575 | GO:GO:0005975 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0045492 | InterPro:IRX15/IRX15L/IGXM | EntrezGene:LOC100253955 | wikigene:LOC100253955 | PFAM:PF04669 | PANTHER:PTHR31444 |
| PANTHER:PTHR31444:SF1 | InterPro:Polysacc_synth_dom | TIGRFAMs:TIGR01627 | TMHMM:TMhelix | UniParc:UPI00015CCEF9 | ArrayExpress:VIT_01s0010g03680 |
| EnsemblPlantsGene:VIT_01s0010g03680 | EnsemblPlants:VIT_01s0010g03680.t01 | unigene:Vvi.8403 | RefSeq:XP_002277620 | RefSeq:XP_002277620.1 | : |
Description
No Description!
Coordinates
chr1:-:21033979..21035047
Molecular Weight (calculated)
31711.2 Da
IEP (calculated)
7.559
GRAVY (calculated)
-0.037
Length
281 amino acids
Sequence
(BLAST)
(BLAST)
001: MKKRHLLEKP WFLRLALVGL IAGVLFIYHF VQNSDHSLLC SFAAESPRAD SSATQIQLSA ILHYATSRIV PQQTLAEITV SFDVLQSLAS CNFLVFGLGF
101: DSLMWSSFNA RGDTLFLEED PKWVQTVLKD APTLRAHTVR YRTHLSEADD LLSTYRSVPE CMPPKAYLRG NNRCKLALSD LPDEVYDKEW DLIMIDAPRG
201: YFPEAPGRMA AIFSAAVMAR ARVRPGVTHV FLHDVDRRVE KVYAEELLCR KYQVGSVGRL WHFEIPPAAN LSRASDSTGF C
101: DSLMWSSFNA RGDTLFLEED PKWVQTVLKD APTLRAHTVR YRTHLSEADD LLSTYRSVPE CMPPKAYLRG NNRCKLALSD LPDEVYDKEW DLIMIDAPRG
201: YFPEAPGRMA AIFSAAVMAR ARVRPGVTHV FLHDVDRRVE KVYAEELLCR KYQVGSVGRL WHFEIPPAAN LSRASDSTGF C
001: MIQDKSKGAK QTLLERPWFL AVALAGLIGG AMLITSFIRA TDNTLSLCST AKNTAASIAK YTATPIQLQS IVHYATSHTV PQQSFEEISI SLNVLKERLP
101: CNFLVFGLGR DSLMWASLNP GGTTVFLEED PEWIEAVLKD APSLRAHHVQ YRTHLSEAGR LLSTYKNEPM CLPAKAFPIR YNEKCPLALT SLPDEFYDTE
201: WDLIMVDAPK GYFPEAPGRM AAIFSSAIMA RNRKGDGTTH VFLHDVNRKV ENAFANEFLC EKYKVNSVGR LWHFEIPNAA NMTDQPGDRF C
101: CNFLVFGLGR DSLMWASLNP GGTTVFLEED PEWIEAVLKD APSLRAHHVQ YRTHLSEAGR LLSTYKNEPM CLPAKAFPIR YNEKCPLALT SLPDEFYDTE
201: WDLIMVDAPK GYFPEAPGRM AAIFSSAIMA RNRKGDGTTH VFLHDVNRKV ENAFANEFLC EKYKVNSVGR LWHFEIPNAA NMTDQPGDRF C
Arabidopsis Description
At1g67330 [Source:UniProtKB/TrEMBL;Acc:Q9FYG0]
SUBAcon: [golgi,endoplasmic reticulum]
SUBAcon: [golgi,endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.