Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, peroxisome, plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- endoplasmic reticulum 2
- plastid 2
- extracellular 1
- golgi 1
- plasma membrane 1
- vacuole 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G381200.1 | Wheat | extracellular | 83.53 | 96.27 |
| TraesCS2D01G377700.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 83.53 | 96.27 |
| TraesCS2B01G398500.1 | Wheat | extracellular | 82.94 | 95.59 |
| HORVU3Hr1G108120.1 | Barley | extracellular, plasma membrane, vacuole | 73.82 | 85.96 |
| Os11t0490100-01 | Rice | plasma membrane | 66.76 | 75.17 |
| Zm00001d007327_P001 | Maize | plasma membrane | 63.53 | 70.36 |
| GSMUA_Achr9P01430_001 | Banana | extracellular | 48.53 | 57.29 |
| GSMUA_Achr3P19550_001 | Banana | mitochondrion | 46.76 | 55.4 |
| KRH31488 | Soybean | endoplasmic reticulum, golgi | 41.18 | 49.3 |
| CDY27638 | Canola | endoplasmic reticulum | 41.76 | 49.13 |
| CDX84898 | Canola | endoplasmic reticulum | 41.76 | 49.13 |
| Bra032854.1-P | Field mustard | endoplasmic reticulum | 41.76 | 49.13 |
| CDY28894 | Canola | endoplasmic reticulum, golgi | 41.76 | 48.8 |
| CDY07428 | Canola | endoplasmic reticulum, golgi | 41.47 | 48.45 |
| Bra004093.1-P | Field mustard | endoplasmic reticulum, golgi | 41.47 | 48.45 |
| CDY12639 | Canola | endoplasmic reticulum, golgi | 40.88 | 48.26 |
| Bra034005.1-P | Field mustard | endoplasmic reticulum, golgi | 40.88 | 48.26 |
| AT1G27930.1 | Thale cress | endoplasmic reticulum, plasma membrane | 40.88 | 48.1 |
| KRH58773 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 39.12 | 48.01 |
| KRH42675 | Soybean | endoplasmic reticulum | 40.0 | 47.55 |
| CDY51186 | Canola | endoplasmic reticulum, plasma membrane | 40.88 | 47.12 |
| AT1G67330.1 | Thale cress | endoplasmic reticulum, golgi | 40.29 | 47.08 |
| Bra030066.1-P | Field mustard | endoplasmic reticulum, plasma membrane | 40.0 | 47.06 |
| VIT_14s0068g01970.t01 | Wine grape | endoplasmic reticulum, plasma membrane | 38.24 | 46.1 |
| VIT_01s0010g03680.t01 | Wine grape | endoplasmic reticulum, golgi | 36.76 | 44.48 |
| KRG97408 | Soybean | plastid | 41.76 | 44.38 |
| PGSC0003DMT400084744 | Potato | endoplasmic reticulum | 36.18 | 43.62 |
| Solyc07g015920.1.1 | Tomato | extracellular | 34.71 | 42.91 |
| PGSC0003DMT400077009 | Potato | extracellular | 34.41 | 42.55 |
| KRH06938 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 36.76 | 42.23 |
| KRG94533 | Soybean | golgi, mitochondrion | 38.24 | 42.21 |
| HORVU5Hr1G080580.1 | Barley | endoplasmic reticulum, mitochondrion, plastid | 35.88 | 40.67 |
| HORVU0Hr1G015370.1 | Barley | cytosol, extracellular | 26.18 | 37.24 |
| HORVU7Hr1G120340.1 | Barley | plastid | 36.18 | 34.45 |
| HORVU2Hr1G113560.1 | Barley | golgi, plasma membrane | 26.76 | 30.23 |
| HORVU4Hr1G015310.3 | Barley | endoplasmic reticulum, plastid | 30.88 | 29.66 |
| HORVU7Hr1G100750.3 | Barley | endoplasmic reticulum | 27.65 | 27.73 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G089430.1 | EnsemblPlantsGene:HORVU2Hr1G089430 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0045492 | InterPro:IRX15/IRX15L/IGXM | InterPro:Polysacc_synth_dom | PANTHER:PTHR31444 | PANTHER:PTHR31444:SF1 |
| PFAM:PF04669 | SEG:seg | TIGRFAMs:TIGR01627 | TMHMM:TMhelix | UniParc:UPI0002968380 | UniProt:M0VEZ8 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr2H:-:638901928..638903376
Molecular Weight (calculated)
36761.3 Da
IEP (calculated)
8.959
GRAVY (calculated)
-0.058
Length
340 amino acids
Sequence
(BLAST)
(BLAST)
001: MQREVSWREG DAPSCSPARA KYGVLSIVQS PPHTTHKHSV PATHAMKPPG RLATAAAAAL LVATSLLVAT LLTSPLPLLP LLPCLPGVLA PSGVGYEPSG
101: LAALADAAVY YATTRTVPQQ SGAEISLSLA VLRRRAPIRL LVFGLGHDSR LWHALNPGGV TVFLEEDPEW YRIVRAKSPF LRAHLVTYRT RMDHADLLFD
201: SYKNYSSCVP GAGAEAADAP VQVRDNAACP LALHNLPPEV YENEWDMLML DAPKGYFASA PGRMAAIWTA AAMARARRGE GDTDVFLHDV DRKVEKMYGK
301: EFLCDMFRVG GTGRLWHFSI PPVSRRGNAT ASGGGKRPFC
101: LAALADAAVY YATTRTVPQQ SGAEISLSLA VLRRRAPIRL LVFGLGHDSR LWHALNPGGV TVFLEEDPEW YRIVRAKSPF LRAHLVTYRT RMDHADLLFD
201: SYKNYSSCVP GAGAEAADAP VQVRDNAACP LALHNLPPEV YENEWDMLML DAPKGYFASA PGRMAAIWTA AAMARARRGE GDTDVFLHDV DRKVEKMYGK
301: EFLCDMFRVG GTGRLWHFSI PPVSRRGNAT ASGGGKRPFC
001: MNTLIPSEKR WIITGVLLAG LVGGALLFTS FIRAADETLF LCSTASAKSR AVAAAADYEA TPIQLQAIVH YATSNVVPQQ NLAEISISFN ILKKLAPANF
101: LVFGLGRDSL MWASLNPRGK TLFLEEDLEW FQKVTKDSPF LRAHHVRYRT QLQQADSLLR SYKTEPKCFP AKSYLRGNEK CKLALTGLPD EFYDTEWDLL
201: MVDAPKGYFA EAPGRMAAIF SAAVMARNRK KPGVTHVFLH DVNRRVEKTF AEEFLCRKYR VNAAGRLWHF AIPPAAANAT IDSGDYRFC
101: LVFGLGRDSL MWASLNPRGK TLFLEEDLEW FQKVTKDSPF LRAHHVRYRT QLQQADSLLR SYKTEPKCFP AKSYLRGNEK CKLALTGLPD EFYDTEWDLL
201: MVDAPKGYFA EAPGRMAAIF SAAVMARNRK KPGVTHVFLH DVNRRVEKTF AEEFLCRKYR VNAAGRLWHF AIPPAAANAT IDSGDYRFC
Arabidopsis Description
Probable methyltransferase At1g27930 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7F9]
SUBAcon: [plasma membrane,endoplasmic reticulum]
SUBAcon: [plasma membrane,endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.