Factsheet for Bra032854.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

nucleus 2
plastid 2
endoplasmic reticulum 4
extracellular 3
vacuole 3
plasma membrane 3
golgi 3
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY27638	Canola	endoplasmic reticulum	100.0	100.0
CDX84898	Canola	endoplasmic reticulum	100.0	100.0
AT1G27930.1	Thale cress	endoplasmic reticulum, plasma membrane	92.04	92.04
Bra030066.1-P	Field mustard	endoplasmic reticulum, plasma membrane	91.35	91.35
Bra034005.1-P	Field mustard	endoplasmic reticulum, golgi	65.74	65.97
Bra004093.1-P	Field mustard	endoplasmic reticulum, golgi	66.09	65.64
VIT_01s0010g03680.t01	Wine grape	endoplasmic reticulum, golgi	61.25	62.99
KRH58773	Soybean	endoplasmic reticulum, plasma membrane, vacuole	60.21	62.82
KRH42675	Soybean	endoplasmic reticulum	60.21	60.84
KRH31488	Soybean	endoplasmic reticulum, golgi	59.52	60.56
VIT_14s0068g01970.t01	Wine grape	endoplasmic reticulum, plasma membrane	58.82	60.28
PGSC0003DMT400084744	Potato	endoplasmic reticulum	55.36	56.74
KRG97408	Soybean	plastid	60.9	55.0
GSMUA_Achr3P19550_001	Banana	mitochondrion	54.33	54.7
GSMUA_Achr9P01430_001	Banana	extracellular	52.94	53.12
PGSC0003DMT400077009	Potato	extracellular	50.17	52.73
Solyc07g015920.1.1	Tomato	extracellular	49.13	51.64
TraesCS3D01G492500.1	Wheat	extracellular	50.87	50.34
TraesCS3B01G545900.1	Wheat	extracellular	50.87	50.17
HORVU3Hr1G108120.1	Barley	extracellular, plasma membrane, vacuole	50.52	50.0
TraesCS2D01G377700.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	49.48	48.47
TraesCS2B01G398500.1	Wheat	extracellular	49.48	48.47
TraesCS2A01G381200.1	Wheat	extracellular	49.13	48.14
Zm00001d007327_P001	Maize	plasma membrane	50.87	47.88
Os11t0490100-01	Rice	plasma membrane	48.79	46.69
HORVU2Hr1G089430.1	Barley	endoplasmic reticulum, peroxisome, plastid	49.13	41.76
Bra030789.1-P	Field mustard	endoplasmic reticulum, golgi	39.45	40.57
Bra028013.1-P	Field mustard	golgi	41.52	40.54
Bra034460.1-P	Field mustard	golgi, plasma membrane, vacuole	40.48	39.39
Bra013845.1-P	Field mustard	cytosol	23.88	38.55
Bra016131.1-P	Field mustard	endoplasmic reticulum, extracellular	38.06	37.16
Bra012143.1-P	Field mustard	plastid	30.1	27.62
Bra036059.1-P	Field mustard	endoplasmic reticulum, golgi, plastid	30.8	27.47
Bra019203.1-P	Field mustard	plastid	28.72	26.6
Bra013107.1-P	Field mustard	plastid	28.72	25.3
Bra039840.1-P	Field mustard	plastid	27.68	24.62

Protein Annotations

EnsemblPlants:Bra032854.1	EnsemblPlants:Bra032854.1-P	EnsemblPlantsGene:Bra032854	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0045492	InterPro:IRX15/IRX15L/IGXM	InterPro:Polysacc_synth_dom	PANTHER:PTHR31444
PANTHER:PTHR31444:SF1	PFAM:PF04669	SEG:seg	TIGRFAMs:TIGR01627	TMHMM:TMhelix	UniParc:UPI000254252E
UniProt:M4EVM1	MapMan:35.1	:	:	:	:

Description

AT1G27930 (E=5e-139) | unknown protein

Coordinates

chrA09:+:12384160..12385029

Molecular Weight (calculated)

32401.1 Da

IEP (calculated)

9.309

GRAVY (calculated)

-0.054

Length

289 amino acids

Sequence
(BLAST)

001: MSNLIPPEKR WIITTVLLAG LVGGALLFTS FLRAADDAFF LCSTASAKSR AVAAAADYAA TPIQLQAIVH YATSTVVPQQ NMAEISISFN VLKELAPANF
101: LVFGLGRDSL MWASLNPRGK TLFLEEDLEW FQKVTKDSPF LRAHHVRYRT QLQEADRLLR SYKTEPSCFP AKSYLRGNER CKLALTGLPD EFYDTEWDLI
201: MVDAPKGYFA EAPGRMAAIY SAAVMARNRK KPGVTHVFLH DVNRRVEKTF ANEFLCRKYR VHAAGRLWHF AIPPVAANAT IDGGDYRFC

Best Arabidopsis Sequence Match ( AT1G27930.1 )
(BLAST)

001: MNTLIPSEKR WIITGVLLAG LVGGALLFTS FIRAADETLF LCSTASAKSR AVAAAADYEA TPIQLQAIVH YATSNVVPQQ NLAEISISFN ILKKLAPANF
101: LVFGLGRDSL MWASLNPRGK TLFLEEDLEW FQKVTKDSPF LRAHHVRYRT QLQQADSLLR SYKTEPKCFP AKSYLRGNEK CKLALTGLPD EFYDTEWDLL
201: MVDAPKGYFA EAPGRMAAIF SAAVMARNRK KPGVTHVFLH DVNRRVEKTF AEEFLCRKYR VNAAGRLWHF AIPPAAANAT IDSGDYRFC

Arabidopsis Description

Probable methyltransferase At1g27930 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7F9]
SUBAcon: [endoplasmic reticulum,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.