Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
- endoplasmic reticulum 4
- extracellular 3
- vacuole 3
- plasma membrane 3
- golgi 3
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra032854.1-P | Field mustard | endoplasmic reticulum | 100.0 | 100.0 |
| CDY27638 | Canola | endoplasmic reticulum | 100.0 | 100.0 |
| AT1G27930.1 | Thale cress | endoplasmic reticulum, plasma membrane | 92.04 | 92.04 |
| CDY28894 | Canola | endoplasmic reticulum, golgi | 66.78 | 66.32 |
| CDY07428 | Canola | endoplasmic reticulum, golgi | 66.09 | 65.64 |
| CDY12639 | Canola | endoplasmic reticulum, golgi | 65.4 | 65.62 |
| CDY51186 | Canola | endoplasmic reticulum, plasma membrane | 65.74 | 64.41 |
| VIT_01s0010g03680.t01 | Wine grape | endoplasmic reticulum, golgi | 61.25 | 62.99 |
| KRH58773 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 60.21 | 62.82 |
| KRH42675 | Soybean | endoplasmic reticulum | 60.21 | 60.84 |
| KRH31488 | Soybean | endoplasmic reticulum, golgi | 59.52 | 60.56 |
| VIT_14s0068g01970.t01 | Wine grape | endoplasmic reticulum, plasma membrane | 58.82 | 60.28 |
| PGSC0003DMT400084744 | Potato | endoplasmic reticulum | 55.36 | 56.74 |
| KRG97408 | Soybean | plastid | 60.9 | 55.0 |
| GSMUA_Achr3P19550_001 | Banana | mitochondrion | 54.33 | 54.7 |
| GSMUA_Achr9P01430_001 | Banana | extracellular | 52.94 | 53.12 |
| PGSC0003DMT400077009 | Potato | extracellular | 50.17 | 52.73 |
| Solyc07g015920.1.1 | Tomato | extracellular | 49.13 | 51.64 |
| TraesCS3D01G492500.1 | Wheat | extracellular | 50.87 | 50.34 |
| TraesCS3B01G545900.1 | Wheat | extracellular | 50.87 | 50.17 |
| HORVU3Hr1G108120.1 | Barley | extracellular, plasma membrane, vacuole | 50.52 | 50.0 |
| TraesCS2B01G398500.1 | Wheat | extracellular | 49.48 | 48.47 |
| TraesCS2D01G377700.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 49.48 | 48.47 |
| TraesCS2A01G381200.1 | Wheat | extracellular | 49.13 | 48.14 |
| Zm00001d007327_P001 | Maize | plasma membrane | 50.87 | 47.88 |
| Os11t0490100-01 | Rice | plasma membrane | 48.79 | 46.69 |
| HORVU2Hr1G089430.1 | Barley | endoplasmic reticulum, peroxisome, plastid | 49.13 | 41.76 |
| CDY20685 | Canola | endoplasmic reticulum, golgi, plasma membrane | 39.79 | 40.93 |
| CDY31075 | Canola | endoplasmic reticulum, golgi, plasma membrane | 39.45 | 40.57 |
| CDX93751 | Canola | golgi | 41.52 | 40.54 |
| CDY15292 | Canola | golgi | 41.52 | 40.54 |
| CDY48797 | Canola | golgi, plasma membrane | 40.83 | 39.73 |
| CDX96332 | Canola | endoplasmic reticulum, extracellular | 38.06 | 37.16 |
| CDX72815 | Canola | endoplasmic reticulum, extracellular | 37.72 | 36.21 |
| CDY37946 | Canola | extracellular | 29.76 | 32.45 |
| CDX81329 | Canola | plastid | 30.45 | 28.57 |
| CDY12819 | Canola | golgi, mitochondrion, plasma membrane, plastid | 30.1 | 27.62 |
| CDY17753 | Canola | endoplasmic reticulum, golgi | 30.8 | 27.47 |
| CDY30600 | Canola | endoplasmic reticulum, golgi | 30.8 | 27.47 |
| CDY01429 | Canola | golgi, mitochondrion, plasma membrane, plastid | 29.76 | 27.3 |
| CDY34323 | Canola | plastid | 28.72 | 26.86 |
| CDY03407 | Canola | plastid | 28.37 | 26.37 |
| CDX92660 | Canola | plastid | 28.37 | 26.28 |
| CDY13145 | Canola | plastid | 28.37 | 25.0 |
| CDX89660 | Canola | plastid | 28.37 | 24.77 |
| CDY37228 | Canola | plastid | 27.68 | 24.77 |
| CDY62313 | Canola | plastid | 26.99 | 24.38 |
Protein Annotations
| EnsemblPlants:CDX84898 | EnsemblPlantsGene:GSBRNA2T00142223001 | GO:A0A078GSQ9 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045492 | InterPro:IRX15/IRX15L/IGXM | InterPro:Polysacc_synth_dom | PANTHER:PTHR31444 |
| PANTHER:PTHR31444:SF1 | PFAM:PF04669 | ProteinID:CDX84898 | ProteinID:CDX84898.1 | ProteinID:CDY27638.1 | SEG:seg |
| TIGRFAMs:TIGR01627 | TMHMM:TMhelix | UniParc:UPI000254252E | UniProt:A0A078GSQ9 | MapMan:35.1 | : |
Description
BnaC05g21570DBnaA09g27690D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GSQ9]
Coordinates
chrLK031839:+:8663..9931
Molecular Weight (calculated)
32401.1 Da
IEP (calculated)
9.309
GRAVY (calculated)
-0.054
Length
289 amino acids
Sequence
(BLAST)
(BLAST)
001: MSNLIPPEKR WIITTVLLAG LVGGALLFTS FLRAADDAFF LCSTASAKSR AVAAAADYAA TPIQLQAIVH YATSTVVPQQ NMAEISISFN VLKELAPANF
101: LVFGLGRDSL MWASLNPRGK TLFLEEDLEW FQKVTKDSPF LRAHHVRYRT QLQEADRLLR SYKTEPSCFP AKSYLRGNER CKLALTGLPD EFYDTEWDLI
201: MVDAPKGYFA EAPGRMAAIY SAAVMARNRK KPGVTHVFLH DVNRRVEKTF ANEFLCRKYR VHAAGRLWHF AIPPVAANAT IDGGDYRFC
101: LVFGLGRDSL MWASLNPRGK TLFLEEDLEW FQKVTKDSPF LRAHHVRYRT QLQEADRLLR SYKTEPSCFP AKSYLRGNER CKLALTGLPD EFYDTEWDLI
201: MVDAPKGYFA EAPGRMAAIY SAAVMARNRK KPGVTHVFLH DVNRRVEKTF ANEFLCRKYR VHAAGRLWHF AIPPVAANAT IDGGDYRFC
001: MNTLIPSEKR WIITGVLLAG LVGGALLFTS FIRAADETLF LCSTASAKSR AVAAAADYEA TPIQLQAIVH YATSNVVPQQ NLAEISISFN ILKKLAPANF
101: LVFGLGRDSL MWASLNPRGK TLFLEEDLEW FQKVTKDSPF LRAHHVRYRT QLQQADSLLR SYKTEPKCFP AKSYLRGNEK CKLALTGLPD EFYDTEWDLL
201: MVDAPKGYFA EAPGRMAAIF SAAVMARNRK KPGVTHVFLH DVNRRVEKTF AEEFLCRKYR VNAAGRLWHF AIPPAAANAT IDSGDYRFC
101: LVFGLGRDSL MWASLNPRGK TLFLEEDLEW FQKVTKDSPF LRAHHVRYRT QLQQADSLLR SYKTEPKCFP AKSYLRGNEK CKLALTGLPD EFYDTEWDLL
201: MVDAPKGYFA EAPGRMAAIF SAAVMARNRK KPGVTHVFLH DVNRRVEKTF AEEFLCRKYR VNAAGRLWHF AIPPAAANAT IDSGDYRFC
Arabidopsis Description
Probable methyltransferase At1g27930 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7F9]
SUBAcon: [endoplasmic reticulum,plasma membrane]
SUBAcon: [endoplasmic reticulum,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.