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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 3
  • mitochondrion 1
  • extracellular 2
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:extracellular, golgi, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:extracellular
PProwler:secretory
WoLF PSORT:plastid
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra039840.1-P Field mustard plastid 97.52 96.92
CDY62313 Canola plastid 91.64 92.5
CDY13145 Canola plastid 83.28 82.01
CDX89660 Canola plastid 82.97 80.97
AT2G15440.1 Thale cress plastid 76.16 74.77
KRH50341 Soybean golgi, plastid 51.39 53.38
KRH70689 Soybean plastid 49.54 49.54
PGSC0003DMT400066571 Potato endoplasmic reticulum, golgi, mitochondrion, plastid 44.89 46.18
HORVU0Hr1G015370.1 Barley cytosol, extracellular 34.06 46.03
CDY12819 Canola golgi, mitochondrion, plasma membrane, plastid 44.27 45.4
CDY01429 Canola golgi, mitochondrion, plasma membrane, plastid 43.96 45.08
Solyc01g107800.2.1 Tomato endoplasmic reticulum, golgi, mitochondrion, plastid 43.65 44.9
CDX81329 Canola plastid 42.11 44.16
HORVU2Hr1G113560.1 Barley golgi, plasma membrane 39.63 42.52
GSMUA_Achr9P25260_001 Banana golgi 42.41 41.77
CDY17753 Canola endoplasmic reticulum, golgi 41.8 41.67
CDY30600 Canola endoplasmic reticulum, golgi 41.49 41.36
Os04t0649900-01 Rice mitochondrion 40.25 40.88
TraesCS2B01G540300.1 Wheat golgi 39.63 40.51
TraesCS2D01G513800.1 Wheat golgi, plastid 39.63 40.51
TraesCS2A01G512400.1 Wheat golgi 39.32 40.19
GSMUA_Achr10P... Banana extracellular, plasma membrane, plastid 35.6 39.93
GSMUA_Achr6P29610_001 Banana endoplasmic reticulum, golgi, plastid 39.63 39.26
KXG27192 Sorghum golgi, mitochondrion, plastid 39.63 39.14
GSMUA_Achr8P03360_001 Banana golgi 39.32 38.72
Zm00001d014532_P001 Maize plasma membrane 37.77 38.01
TraesCS6D01G121700.1 Wheat mitochondrion 38.39 37.92
OQU84413 Sorghum golgi, mitochondrion 37.46 37.81
TraesCS6A01G131900.1 Wheat mitochondrion 38.39 37.8
EER88850 Sorghum plastid 38.39 37.35
Zm00001d002066_P001 Maize plasma membrane 38.7 37.31
TraesCS6B01G160200.1 Wheat mitochondrion 38.08 37.05
Zm00001d015307_P001 Maize golgi, mitochondrion, plastid 36.84 36.84
TraesCS7A01G443100.1 Wheat golgi, mitochondrion 38.7 36.66
TraesCS7D01G432300.1 Wheat golgi, mitochondrion 38.39 36.58
TraesCS7B01G341900.1 Wheat golgi, mitochondrion 38.7 36.55
Os06t0687600-00 Rice golgi 37.15 35.71
HORVU7Hr1G100750.3 Barley endoplasmic reticulum 36.53 34.81
CDX96332 Canola endoplasmic reticulum, extracellular 30.96 33.78
CDY31075 Canola endoplasmic reticulum, golgi, plasma membrane 28.48 32.74
CDY20685 Canola endoplasmic reticulum, golgi, plasma membrane 28.48 32.74
CDY12639 Canola endoplasmic reticulum, golgi 29.1 32.64
CDY28894 Canola endoplasmic reticulum, golgi 28.79 31.96
CDY51186 Canola endoplasmic reticulum, plasma membrane 29.1 31.86
CDY07428 Canola endoplasmic reticulum, golgi 28.48 31.62
CDX72815 Canola endoplasmic reticulum, extracellular 29.41 31.56
CDY48797 Canola golgi, plasma membrane 28.48 30.98
CDX93751 Canola golgi 27.86 30.41
CDY15292 Canola golgi 27.86 30.41
CDY03407 Canola plastid 29.1 30.23
Os02t0158500-00 Rice plastid 36.53 30.1
CDY34323 Canola plastid 28.17 29.45
CDX92660 Canola plastid 27.55 28.53
CDY37946 Canola extracellular 22.91 27.92
CDX84898 Canola endoplasmic reticulum 24.77 27.68
CDY27638 Canola endoplasmic reticulum 24.77 27.68
Protein Annotations
MapMan:35.1GO:A0A078HK44UniProt:A0A078HK44EnsemblPlants:CDY37228ProteinID:CDY37228ProteinID:CDY37228.1
GO:GO:0005575GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987
GO:GO:0016020GO:GO:0016021GO:GO:0045492EnsemblPlantsGene:GSBRNA2T00063715001InterPro:IRX15/IRX15L/IGXMPFAM:PF04669
PANTHER:PTHR31444PANTHER:PTHR31444:SF0InterPro:Polysacc_synth_domTIGRFAMs:TIGR01627TMHMM:TMhelixUniParc:UPI0004EE7919
SEG:seg:::::
Description
BnaA09g08490DBnaA09g08490D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HK44]
Coordinates
chrLK032395:-:249499..250470
Molecular Weight (calculated)
35526.1 Da
IEP (calculated)
7.595
GRAVY (calculated)
-0.118
Length
323 amino acids
Sequence
(BLAST)
001: MKNNKNTNLI LFHHHNNTSS TAVTVNHHRL LLLFIFTLSL FTLIFSFSLF SSSLHSTTPT SNFLSSSSSP SSSSSLSPPI LAALLHYTSS TPPNTSMSFS
101: ELSAISTVIN SKAPTCNLLV FGLSHESLLW RSVNLRGRTV FVDENPYLVS RFEQSNPGAE AYDVVFPTKV SQAGKLLRYY KTRPECRPVQ NLLFSDCKLA
201: INDLPNFVYE IEWDVVLIDG PSGYAGDSPG RMAPIFTSAV LAKSKGSGRK TKTTDVFVRE FGRKLERVYS DEFLCEENLI EVVGEIGHFV VAAEKGGKQG
301: NGFCRNSTKL SEPFTPVSGG DED
Best Arabidopsis Sequence Match ( AT2G15440.1 )
(BLAST)
001: MKSNTNTNLI LFHHHSPLTS KSPSAVAAAN HHRFLFIFFL SFFTLLFSFS LFSSSIHSTT SSHSLSSSPS SSSLPPPVLA ALLHYTSSSP PNTSMSFLEL
101: STISNIIHSH GPACNLLIFG LTHESLLWRS INFQGRTVFV DESPYSVSKF EQSNPGVEAY EVVYSTKVSQ AKKLLGYYKT RPECRPVQNL LFSDCKLGIN
201: DLPNFVYEID WDVILIDGPR GYASDSPGRM APIFTSAVLA KSKDFGTKTK KTDVLVHEFG RKIERVYSEE FLCEENLIEV VGDLGHFVVA AAEERESYGD
301: GFCRNSTRLS ESFTAVSGGD EEKVGVDDE
Arabidopsis Description
At2g15440 [Source:UniProtKB/TrEMBL;Acc:Q9SJN8]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.