Subcellular Localization
min:
: max
Winner_takes_all: golgi, plastid
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 2
- golgi 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G540300.1 | Wheat | golgi | 98.42 | 98.42 |
| TraesCS2A01G512400.1 | Wheat | golgi | 97.78 | 97.78 |
| HORVU2Hr1G113560.1 | Barley | golgi, plasma membrane | 91.46 | 96.01 |
| Os04t0649900-01 | Rice | mitochondrion | 81.33 | 80.82 |
| KXG27192 | Sorghum | golgi, mitochondrion, plastid | 80.38 | 77.68 |
| Zm00001d002066_P001 | Maize | plasma membrane | 80.06 | 75.52 |
| TraesCS7D01G432300.1 | Wheat | golgi, mitochondrion | 56.96 | 53.1 |
| GSMUA_Achr9P25260_001 | Banana | golgi | 54.43 | 52.44 |
| GSMUA_Achr10P... | Banana | extracellular, plasma membrane, plastid | 47.15 | 51.74 |
| GSMUA_Achr8P03360_001 | Banana | golgi | 52.85 | 50.91 |
| TraesCS6D01G121700.1 | Wheat | mitochondrion | 52.53 | 50.76 |
| GSMUA_Achr6P29610_001 | Banana | endoplasmic reticulum, golgi, plastid | 52.22 | 50.61 |
| VIT_03s0063g00030.t01 | Wine grape | plastid | 35.13 | 50.45 |
| VIT_07s0031g00110.t01 | Wine grape | golgi | 45.25 | 46.13 |
| PGSC0003DMT400065494 | Potato | golgi, plasma membrane, plastid | 43.99 | 46.03 |
| CDX81329 | Canola | plastid | 43.99 | 45.13 |
| KRH77040 | Soybean | mitochondrion | 43.35 | 45.07 |
| KRH50341 | Soybean | golgi, plastid | 43.99 | 44.69 |
| KRH28432 | Soybean | mitochondrion | 43.35 | 44.48 |
| Solyc02g093090.1.1 | Tomato | extracellular, nucleus | 43.35 | 44.48 |
| PGSC0003DMT400064322 | Potato | plastid | 43.04 | 44.16 |
| CDY12819 | Canola | golgi, mitochondrion, plasma membrane, plastid | 43.99 | 44.13 |
| Bra012143.1-P | Field mustard | plastid | 43.67 | 43.81 |
| PGSC0003DMT400066571 | Potato | endoplasmic reticulum, golgi, mitochondrion, plastid | 43.35 | 43.63 |
| CDY01429 | Canola | golgi, mitochondrion, plasma membrane, plastid | 43.35 | 43.49 |
| AT5G67210.1 | Thale cress | endoplasmic reticulum, golgi, mitochondrion, plastid | 43.35 | 43.22 |
| Solyc01g107800.2.1 | Tomato | endoplasmic reticulum, golgi, mitochondrion, plastid | 42.09 | 42.36 |
| Bra036059.1-P | Field mustard | endoplasmic reticulum, golgi, plastid | 42.41 | 41.36 |
| KRH04549 | Soybean | plastid | 41.14 | 41.27 |
| KRH70689 | Soybean | plastid | 42.09 | 41.18 |
| KRH57814 | Soybean | mitochondrion | 41.14 | 41.14 |
| CDY30600 | Canola | endoplasmic reticulum, golgi | 42.09 | 41.05 |
| CDY17753 | Canola | endoplasmic reticulum, golgi | 42.09 | 41.05 |
| AT3G50220.1 | Thale cress | endoplasmic reticulum, golgi | 41.77 | 40.99 |
| Bra013107.1-P | Field mustard | plastid | 41.77 | 40.24 |
| CDY13145 | Canola | plastid | 41.46 | 39.94 |
| Bra039840.1-P | Field mustard | plastid | 40.82 | 39.69 |
| CDY37228 | Canola | plastid | 40.51 | 39.63 |
| CDX89660 | Canola | plastid | 41.46 | 39.58 |
| CDY62313 | Canola | plastid | 39.56 | 39.06 |
| AT2G15440.1 | Thale cress | plastid | 40.19 | 38.6 |
| TraesCS5D01G319700.1 | Wheat | mitochondrion | 35.13 | 37.25 |
| TraesCS7D01G549800.1 | Wheat | mitochondrion, plastid | 35.76 | 36.93 |
| TraesCS1D01G370900.1 | Wheat | extracellular, plasma membrane | 28.48 | 33.46 |
| TraesCS4D01G086700.1 | Wheat | mitochondrion | 34.18 | 33.13 |
| TraesCS3D01G492500.1 | Wheat | extracellular | 29.43 | 31.85 |
| TraesCS2D01G377700.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 28.8 | 30.85 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G513800.1 | EnsemblPlantsGene:TraesCS2D01G513800 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0045492 | InterPro:IRX15/IRX15L/IGXM | InterPro:Polysacc_synth_dom | PANTHER:PTHR31444 | PANTHER:PTHR31444:SF3 |
| PFAM:PF04669 | SEG:seg | TIGRFAMs:TIGR01627 | TMHMM:TMhelix | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr2D:-:605909490..605910440
Molecular Weight (calculated)
33797.0 Da
IEP (calculated)
7.086
GRAVY (calculated)
-0.036
Length
316 amino acids
Sequence
(BLAST)
(BLAST)
001: MKSIGSRDKL QAAAAATGPR RVLLLVFASC FAFATLLTFL YTSSGFASAA SSGSRLASGS SSGAAAGSGA ALPLPVFDAL VHYASFSNAT HRMTDTDIRA
101: ISAILRARGP CNLLVFGLGA ESPLWLALNH GGRTVYLDEN EFYVKYLEPR HPGLEAYDVS YTTKVRDFRD LLEAARGSRA AECRPVQNLL FSECRLAIND
201: LPNELYDVPW DVVLIDGPSG WNPNSPGRMP SIFTTAVLAR SGATAAKGPT DVLVHDFNFE VEQVLSKEFL CDENRVAGSG TPSLAHFVIR PGGPADAFCA
301: AGQDSRATSE EKTRRK
101: ISAILRARGP CNLLVFGLGA ESPLWLALNH GGRTVYLDEN EFYVKYLEPR HPGLEAYDVS YTTKVRDFRD LLEAARGSRA AECRPVQNLL FSECRLAIND
201: LPNELYDVPW DVVLIDGPSG WNPNSPGRMP SIFTTAVLAR SGATAAKGPT DVLVHDFNFE VEQVLSKEFL CDENRVAGSG TPSLAHFVIR PGGPADAFCA
301: AGQDSRATSE EKTRRK
001: MKSGGNTNTK LILVHPYIQK QTSTNRLWLL AFVSFFTIAF LLTLLYTTDS IISSKNNSAT VSSAVNSAVT TATISQLPTT AINAMLHYAS RSNDSYHMSY
101: GEMKSISDVL RRCSPPCNLL VFGLTHETLL WKSLNHNGRT VFIEENRYYA AYFEEIHPEI EVFDVQYTTK AREARELVSA VKEAARNECR PVQNLLFSDC
201: KLGLNDLPNH VYDVDWDVIL VDGPRGDGGD VPGRMSSIFT AAVLARSKKG GNPKTHVFVH DYYRDVERLC GDEFLCRENL VESNDLLAHY VLEKMDKNST
301: QFCRGRKKKR SVSSPSA
101: GEMKSISDVL RRCSPPCNLL VFGLTHETLL WKSLNHNGRT VFIEENRYYA AYFEEIHPEI EVFDVQYTTK AREARELVSA VKEAARNECR PVQNLLFSDC
201: KLGLNDLPNH VYDVDWDVIL VDGPRGDGGD VPGRMSSIFT AAVLARSKKG GNPKTHVFVH DYYRDVERLC GDEFLCRENL VESNDLLAHY VLEKMDKNST
301: QFCRGRKKKR SVSSPSA
Arabidopsis Description
IRX15-LIRX15-L [Source:UniProtKB/TrEMBL;Acc:A0A178UEM8]
SUBAcon: [mitochondrion,endoplasmic reticulum,golgi,plastid]
SUBAcon: [mitochondrion,endoplasmic reticulum,golgi,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.