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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • mitochondrion 4
  • golgi 3
  • extracellular 1
  • plasma membrane 1
  • endoplasmic reticulum 1
  • vacuole 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:mitochondrion, plastid, secretory
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:golgi
Predotar:mitochondrion
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:mitochondrion
YLoc:golgi
 plasma membrane: 23508561
plasma membrane: 27341663
msms PMID: 27341663 doi
P Voothuluru, JC Anderson, RE Sharp, SC Peck
Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.
msms PMID: 23508561 doi
Z Zhang, P Voothuluru, M Yamaguchi, RE Sharp, SC Peck
Division of Biochemistry, University of Missouri Columbia, MO, USA ; Christopher S. Bond Life Sciences Center, University of Missouri Columbia, MO, USA ; Interdisciplinary Plant Group, University of Missouri Columbia, MO, USA.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d003239_P001 Maize cytosol 48.06 96.41
KXG27192 Sorghum golgi, mitochondrion, plastid 88.06 90.21
TraesCS2D01G513800.1 Wheat golgi, plastid 75.52 80.06
TraesCS2A01G512400.1 Wheat golgi 75.22 79.75
HORVU2Hr1G113560.1 Barley golgi, plasma membrane 71.64 79.73
TraesCS2B01G540300.1 Wheat golgi 74.93 79.43
Os04t0649900-01 Rice mitochondrion 75.22 79.25
Zm00001d015307_P001 Maize golgi, mitochondrion, plastid 52.54 54.49
Zm00001d014532_P001 Maize plasma membrane 51.64 53.89
GSMUA_Achr9P25260_001 Banana golgi 50.45 51.52
GSMUA_Achr6P29610_001 Banana endoplasmic reticulum, golgi, plastid 48.36 49.69
VIT_03s0063g00030.t01 Wine grape plastid 32.54 49.55
GSMUA_Achr8P03360_001 Banana golgi 48.36 49.39
GSMUA_Achr10P... Banana extracellular, plasma membrane, plastid 41.79 48.61
KRH50341 Soybean golgi, plastid 42.39 45.66
PGSC0003DMT400065494 Potato golgi, plasma membrane, plastid 40.9 45.36
VIT_07s0031g00110.t01 Wine grape golgi 40.9 44.19
KRH77040 Soybean mitochondrion 40.0 44.08
Solyc02g093090.1.1 Tomato extracellular, nucleus 40.3 43.83
PGSC0003DMT400064322 Potato plastid 40.0 43.51
CDX81329 Canola plastid 40.0 43.51
KRH28432 Soybean mitochondrion 40.0 43.51
PGSC0003DMT400066571 Potato endoplasmic reticulum, golgi, mitochondrion, plastid 40.6 43.31
AT5G67210.1 Thale cress endoplasmic reticulum, golgi, mitochondrion, plastid 40.6 42.9
KRH70689 Soybean plastid 41.19 42.72
CDY17753 Canola endoplasmic reticulum, golgi 41.19 42.59
CDY30600 Canola endoplasmic reticulum, golgi 41.19 42.59
Bra012143.1-P Field mustard plastid 40.0 42.54
CDY12819 Canola golgi, mitochondrion, plasma membrane, plastid 40.0 42.54
Bra036059.1-P Field mustard endoplasmic reticulum, golgi, plastid 40.9 42.28
CDY01429 Canola golgi, mitochondrion, plasma membrane, plastid 39.7 42.22
Solyc01g107800.2.1 Tomato endoplasmic reticulum, golgi, mitochondrion, plastid 39.1 41.72
AT3G50220.1 Thale cress endoplasmic reticulum, golgi 40.0 41.61
KRH04549 Soybean plastid 38.81 41.27
KRH57814 Soybean mitochondrion 38.51 40.82
Bra013107.1-P Field mustard plastid 38.81 39.63
CDY13145 Canola plastid 38.51 39.33
Bra039840.1-P Field mustard plastid 37.91 39.08
CDX89660 Canola plastid 38.51 38.97
CDY62313 Canola plastid 37.01 38.75
CDY37228 Canola plastid 37.31 38.7
Zm00001d028737_P001 Maize golgi 19.4 38.46
AT2G15440.1 Thale cress plastid 36.72 37.39
Zm00001d041782_P001 Maize plasma membrane 32.84 36.91
Zm00001d023950_P001 Maize mitochondrion 32.54 35.28
Zm00001d007327_P001 Maize plasma membrane 28.66 31.27
Zm00001d001763_P001 Maize plasma membrane 25.67 30.61
Zm00001d007269_P001 Maize mitochondrion, plastid 28.06 28.75
Zm00001d027968_P001 Maize cytosol, mitochondrion, plastid 18.21 19.68
Protein Annotations
EntrezGene:100286337MapMan:35.1UniProt:B6UI35EMBL:BT061839EMBL:EU976900GO:GO:0005975
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0045492InterPro:IRX15/IRX15L/IGXM
ProteinID:ONM12931.1PFAM:PF04669PANTHER:PTHR31444PANTHER:PTHR31444:SF3InterPro:Polysacc_synth_domTIGRFAMs:TIGR01627
TMHMM:TMhelixUniParc:UPI000182FEB5EnsemblPlantsGene:Zm00001d002066EnsemblPlants:Zm00001d002066_P001EnsemblPlants:Zm00001d002066_T001SEG:seg
Description
Protein IRX15-LIKE
Coordinates
chr2:-:5267442..5268449
Molecular Weight (calculated)
35843.4 Da
IEP (calculated)
8.376
GRAVY (calculated)
-0.128
Length
335 amino acids
Sequence
(BLAST)
001: MKSMGSRDKL AAASSPRRVL LVVFAFCFAF ATFLTFLYTT SHFTTAPGSG SGSIAASTTT TTTTTSGSAG GGGGQGQAGP ESVSKRLPVP VFEALVHFAS
101: ISNATHRMSD TDIRAMSSVL RARAPCNLLV FGLGAESPLW LALNHGGRTV FLEENEFYVK YLEPRHPGME AYDVSYTTKV RDFRDLLAAA RAARAKECRP
201: VQNLLFSECR LAINDLPNDL YDVAWDVVLI DGPSGWNPNS PGRMPSIFTT AVLARSGATA AKGPTDVLVH DFQFEVEQVL SREFLCDENR VAGSGTPSLG
301: HFVIRGGGAG AGDAFCSAQE DGSSGEKTRR RRSRK
Best Arabidopsis Sequence Match ( AT5G67210.1 )
(BLAST)
001: MKSGGNTNTK LILVHPYIQK QTSTNRLWLL AFVSFFTIAF LLTLLYTTDS IISSKNNSAT VSSAVNSAVT TATISQLPTT AINAMLHYAS RSNDSYHMSY
101: GEMKSISDVL RRCSPPCNLL VFGLTHETLL WKSLNHNGRT VFIEENRYYA AYFEEIHPEI EVFDVQYTTK AREARELVSA VKEAARNECR PVQNLLFSDC
201: KLGLNDLPNH VYDVDWDVIL VDGPRGDGGD VPGRMSSIFT AAVLARSKKG GNPKTHVFVH DYYRDVERLC GDEFLCRENL VESNDLLAHY VLEKMDKNST
301: QFCRGRKKKR SVSSPSA
Arabidopsis Description
IRX15-LIRX15-L [Source:UniProtKB/TrEMBL;Acc:A0A178UEM8]
SUBAcon: [golgi,plastid,endoplasmic reticulum,mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.