CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 2
mitochondrion 1
extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	extracellular, golgi, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	extracellular
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra013107.1-P	Field mustard	plastid	97.28	98.17
CDY13145	Canola	plastid	96.98	97.87
CDY62313	Canola	plastid	81.57	84.38
CDY37228	Canola	plastid	80.97	82.97
AT2G15440.1	Thale cress	plastid	80.66	81.16
KRH50341	Soybean	golgi, plastid	51.96	55.31
KRH70689	Soybean	plastid	50.76	52.01
PGSC0003DMT400066571	Potato	endoplasmic reticulum, golgi, mitochondrion, plastid	46.83	49.36
Solyc01g107800.2.1	Tomato	endoplasmic reticulum, golgi, mitochondrion, plastid	45.32	47.77
CDY12819	Canola	golgi, mitochondrion, plasma membrane, plastid	44.71	46.98
CDY01429	Canola	golgi, mitochondrion, plasma membrane, plastid	44.41	46.67
HORVU0Hr1G015370.1	Barley	cytosol, extracellular	33.23	46.03
CDX81329	Canola	plastid	41.99	45.13
CDY17753	Canola	endoplasmic reticulum, golgi	42.6	43.52
GSMUA_Achr9P25260_001	Banana	golgi	42.9	43.29
CDY30600	Canola	endoplasmic reticulum, golgi	42.3	43.21
HORVU2Hr1G113560.1	Barley	golgi, plasma membrane	39.27	43.19
GSMUA_Achr10P...	Banana	extracellular, plasma membrane, plastid	36.56	42.01
GSMUA_Achr6P29610_001	Banana	endoplasmic reticulum, golgi, plastid	41.09	41.72
TraesCS2D01G513800.1	Wheat	golgi, plastid	39.58	41.46
TraesCS2B01G540300.1	Wheat	golgi	39.58	41.46
GSMUA_Achr8P03360_001	Banana	golgi	40.79	41.16
TraesCS2A01G512400.1	Wheat	golgi	39.27	41.14
Os04t0649900-01	Rice	mitochondrion	38.97	40.57
Zm00001d014532_P001	Maize	plasma membrane	38.67	39.88
KXG27192	Sorghum	golgi, mitochondrion, plastid	39.27	39.76
OQU84413	Sorghum	golgi, mitochondrion	38.07	39.38
EER88850	Sorghum	plastid	39.27	39.16
TraesCS6D01G121700.1	Wheat	mitochondrion	38.37	38.84
TraesCS6A01G131900.1	Wheat	mitochondrion	38.37	38.72
Zm00001d002066_P001	Maize	plasma membrane	38.97	38.51
Zm00001d015307_P001	Maize	golgi, mitochondrion, plastid	37.46	38.39
TraesCS7D01G432300.1	Wheat	golgi, mitochondrion	38.97	38.05
TraesCS7B01G341900.1	Wheat	golgi, mitochondrion	39.27	38.01
TraesCS6B01G160200.1	Wheat	mitochondrion	38.07	37.95
TraesCS7A01G443100.1	Wheat	golgi, mitochondrion	38.97	37.83
Os06t0687600-00	Rice	golgi	37.76	37.2
HORVU7Hr1G100750.3	Barley	endoplasmic reticulum	36.56	35.69
CDX96332	Canola	endoplasmic reticulum, extracellular	30.82	34.46
CDX72815	Canola	endoplasmic reticulum, extracellular	29.31	32.23
CDY20685	Canola	endoplasmic reticulum, golgi, plasma membrane	27.19	32.03
CDY31075	Canola	endoplasmic reticulum, golgi, plasma membrane	26.89	31.67
CDY12639	Canola	endoplasmic reticulum, golgi	26.89	30.9
Os02t0158500-00	Rice	plastid	36.56	30.87
CDY48797	Canola	golgi, plasma membrane	27.49	30.64
CDY28894	Canola	endoplasmic reticulum, golgi	26.89	30.58
CDY51186	Canola	endoplasmic reticulum, plasma membrane	27.19	30.51
CDY07428	Canola	endoplasmic reticulum, golgi	26.59	30.24
CDY03407	Canola	plastid	28.4	30.23
CDY37946	Canola	extracellular	24.17	30.19
CDY15292	Canola	golgi	26.89	30.07
CDX93751	Canola	golgi	26.89	30.07
CDY34323	Canola	plastid	27.79	29.77
CDX92660	Canola	plastid	27.19	28.85
CDX84898	Canola	endoplasmic reticulum	24.77	28.37
CDY27638	Canola	endoplasmic reticulum	24.77	28.37

Protein Annotations

EnsemblPlants:CDX89660	EnsemblPlantsGene:GSBRNA2T00150043001	GO:A0A078DKG4	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0045492	InterPro:IRX15/IRX15L/IGXM	InterPro:Polysacc_synth_dom	PANTHER:PTHR31444
PANTHER:PTHR31444:SF0	PFAM:PF04669	ProteinID:CDX89660	ProteinID:CDX89660.1	SEG:seg	TIGRFAMs:TIGR01627
TMHMM:TMhelix	UniParc:UPI0004EBAA3E	MapMan:35.1	:	:	:

Description

BnaC03g45740D

Coordinates

chrLK031860:-:561776..562915

Molecular Weight (calculated)

36108.7 Da

IEP (calculated)

6.851

GRAVY (calculated)

-0.160

Length

331 amino acids

Sequence
(BLAST)

001: MKNNGNTNLI LFHHHAPLPS KSASALAAAN YHRLLFIFFL SFFTFLFSLT LFSSSLHSAA TTSHSLSSSS PSSSSLSPPI LAALLHYTSS TPPNTSMSLP
101: ELSAVSTVIN SKGPACNLLV FGLSHESLLW RSANLKGRTV FVDENSYAVS KFEQNNPGVE AYDVVYSTKV SQAGKLLGYY KTRPECRPVQ NLLFSDCKLG
201: INDLPNFVYE IEWDVILIDG PRGYAGDSPG RMAPIFTSAV LAKSKDSGKK KKKKTTDVFV HEFGRKLERV YSEEFLCEEN LIEVVGELGH FVVAAEKGEK
301: QGNGFCRNST KLSEPFTPDS GGDAEVGVDD D

Best Arabidopsis Sequence Match ( AT2G15440.1 )
(BLAST)

001: MKSNTNTNLI LFHHHSPLTS KSPSAVAAAN HHRFLFIFFL SFFTLLFSFS LFSSSIHSTT SSHSLSSSPS SSSLPPPVLA ALLHYTSSSP PNTSMSFLEL
101: STISNIIHSH GPACNLLIFG LTHESLLWRS INFQGRTVFV DESPYSVSKF EQSNPGVEAY EVVYSTKVSQ AKKLLGYYKT RPECRPVQNL LFSDCKLGIN
201: DLPNFVYEID WDVILIDGPR GYASDSPGRM APIFTSAVLA KSKDFGTKTK KTDVLVHEFG RKIERVYSEE FLCEENLIEV VGDLGHFVVA AAEERESYGD
301: GFCRNSTRLS ESFTAVSGGD EEKVGVDDE

Arabidopsis Description

At2g15440 [Source:UniProtKB/TrEMBL;Acc:Q9SJN8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.