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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 1
  • mitochondrion 6
  • golgi 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6A01G131900.1 Wheat mitochondrion 96.94 96.65
HORVU0Hr1G015370.1 Barley cytosol, extracellular 69.11 94.56
TraesCS6B01G160200.1 Wheat mitochondrion 93.88 92.47
OQU84413 Sorghum golgi, mitochondrion 74.01 75.62
Zm00001d015307_P001 Maize golgi, mitochondrion, plastid 72.78 73.68
Os02t0158500-00 Rice plastid 79.82 66.58
TraesCS7D01G432300.1 Wheat golgi, mitochondrion 63.61 61.36
GSMUA_Achr9P25260_001 Banana golgi 58.41 58.23
GSMUA_Achr6P29610_001 Banana endoplasmic reticulum, golgi, plastid 55.05 55.21
GSMUA_Achr10P... Banana extracellular, plasma membrane, plastid 48.62 55.21
GSMUA_Achr8P03360_001 Banana golgi 55.05 54.88
VIT_03s0063g00030.t01 Wine grape plastid 35.47 52.73
TraesCS2D01G513800.1 Wheat golgi, plastid 50.76 52.53
PGSC0003DMT400066571 Potato endoplasmic reticulum, golgi, mitochondrion, plastid 43.73 45.54
PGSC0003DMT400065494 Potato golgi, plasma membrane, plastid 41.9 45.36
KRH50341 Soybean golgi, plastid 43.12 45.34
VIT_07s0031g00110.t01 Wine grape golgi 42.81 45.16
CDX81329 Canola plastid 41.9 44.48
PGSC0003DMT400064322 Potato plastid 41.9 44.48
AT5G67210.1 Thale cress endoplasmic reticulum, golgi, mitochondrion, plastid 42.81 44.16
Solyc02g093090.1.1 Tomato extracellular, nucleus 41.59 44.16
KRH70689 Soybean plastid 43.43 43.96
Solyc01g107800.2.1 Tomato endoplasmic reticulum, golgi, mitochondrion, plastid 42.2 43.95
Bra012143.1-P Field mustard plastid 42.2 43.81
KRH77040 Soybean mitochondrion 40.67 43.75
CDY12819 Canola golgi, mitochondrion, plasma membrane, plastid 41.9 43.49
CDY01429 Canola golgi, mitochondrion, plasma membrane, plastid 41.59 43.17
AT3G50220.1 Thale cress endoplasmic reticulum, golgi 42.2 42.86
KRH28432 Soybean mitochondrion 40.37 42.86
CDY30600 Canola endoplasmic reticulum, golgi 42.2 42.59
CDY17753 Canola endoplasmic reticulum, golgi 42.2 42.59
Bra036059.1-P Field mustard endoplasmic reticulum, golgi, plastid 42.2 42.59
KRH57814 Soybean mitochondrion 40.67 42.09
KRH04549 Soybean plastid 40.06 41.59
Bra039840.1-P Field mustard plastid 39.14 39.38
CDY62313 Canola plastid 37.92 38.75
CDY13145 Canola plastid 38.84 38.72
Bra013107.1-P Field mustard plastid 38.84 38.72
CDY37228 Canola plastid 37.92 38.39
CDX89660 Canola plastid 38.84 38.37
AT2G15440.1 Thale cress plastid 37.31 37.08
TraesCS5D01G319700.1 Wheat mitochondrion 33.03 36.24
TraesCS7D01G549800.1 Wheat mitochondrion, plastid 33.03 35.29
TraesCS3D01G492500.1 Wheat extracellular 29.97 33.56
TraesCS1D01G370900.1 Wheat extracellular, plasma membrane 27.22 33.09
TraesCS2D01G377700.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 29.66 32.88
TraesCS4D01G086700.1 Wheat mitochondrion 31.8 31.9
Protein Annotations
EnsemblPlants:TraesCS6D01G121700.1EnsemblPlantsGene:TraesCS6D01G121700GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0009987GO:GO:0045492InterPro:IRX15/IRX15L/IGXMInterPro:Polysacc_synth_domPANTHER:PTHR31444PANTHER:PTHR31444:SF19
PFAM:PF04669SEG:segTIGRFAMs:TIGR01627TMHMM:TMhelixMapMan:35.1:
Description
No Description!
Coordinates
chr6D:-:86601535..86602518
Molecular Weight (calculated)
34356.9 Da
IEP (calculated)
7.432
GRAVY (calculated)
0.099
Length
327 amino acids
Sequence
(BLAST)
001: MKAMSGPKLL LVRQPSSKYG NGAVSPATAA SVSGRRFWLV AFLALFTCAS LLTVFSTARA PSGAASPRVT FAAGAGAGSA IGASADGGAL PAYVFDALVR
101: YAAAAGANST VSMPEEDVRA IASVLRRRAP CNLLVFGLGA ETPLWRALNH GGRTVFLDEN PFYVAHMEGA HGGLEAYDVA YATAVRELPD LLDAARASRR
201: AECRPVQNLL FSDCRLAIGD LPNQLYDVAW DVILVDGPHG YAEASPGRMA AIFSAAVMAR TKGTVTDVLV HDYEREVESM CAREFLCDEN RIEGTGTPSL
301: GHYVVRGGAA ANREAFCGAP PTTKKAN
Best Arabidopsis Sequence Match ( AT5G67210.1 )
(BLAST)
001: MKSGGNTNTK LILVHPYIQK QTSTNRLWLL AFVSFFTIAF LLTLLYTTDS IISSKNNSAT VSSAVNSAVT TATISQLPTT AINAMLHYAS RSNDSYHMSY
101: GEMKSISDVL RRCSPPCNLL VFGLTHETLL WKSLNHNGRT VFIEENRYYA AYFEEIHPEI EVFDVQYTTK AREARELVSA VKEAARNECR PVQNLLFSDC
201: KLGLNDLPNH VYDVDWDVIL VDGPRGDGGD VPGRMSSIFT AAVLARSKKG GNPKTHVFVH DYYRDVERLC GDEFLCRENL VESNDLLAHY VLEKMDKNST
301: QFCRGRKKKR SVSSPSA
Arabidopsis Description
IRX15-LIRX15-L [Source:UniProtKB/TrEMBL;Acc:A0A178UEM8]
SUBAcon: [mitochondrion,endoplasmic reticulum,golgi,plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.