Factsheet for Bra013107.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 3
mitochondrion 1
endoplasmic reticulum 2
extracellular 1
golgi 2
plasma membrane 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus, plastid
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY13145	Canola	plastid	99.09	99.09
CDX89660	Canola	plastid	98.17	97.28
Bra039840.1-P	Field mustard	plastid	82.01	82.77
AT2G15440.1	Thale cress	plastid	81.71	81.46
KRH50341	Soybean	golgi, plastid	52.44	55.31
KRH70689	Soybean	plastid	51.22	52.01
PGSC0003DMT400066571	Potato	endoplasmic reticulum, golgi, mitochondrion, plastid	47.56	49.68
Solyc01g107800.2.1	Tomato	endoplasmic reticulum, golgi, mitochondrion, plastid	46.04	48.09
Bra012143.1-P	Field mustard	plastid	45.12	46.98
HORVU0Hr1G015370.1	Barley	cytosol, extracellular	33.54	46.03
GSMUA_Achr9P25260_001	Banana	golgi	43.9	43.9
HORVU2Hr1G113560.1	Barley	golgi, plasma membrane	40.24	43.85
Bra036059.1-P	Field mustard	endoplasmic reticulum, golgi, plastid	42.99	43.52
GSMUA_Achr10P...	Banana	extracellular, plasma membrane, plastid	37.8	43.06
GSMUA_Achr6P29610_001	Banana	endoplasmic reticulum, golgi, plastid	41.77	42.02
TraesCS2D01G513800.1	Wheat	golgi, plastid	40.24	41.77
TraesCS2B01G540300.1	Wheat	golgi	40.24	41.77
GSMUA_Achr8P03360_001	Banana	golgi	41.77	41.77
TraesCS2A01G512400.1	Wheat	golgi	39.94	41.46
Os04t0649900-01	Rice	mitochondrion	39.94	41.2
KXG27192	Sorghum	golgi, mitochondrion, plastid	40.24	40.37
Zm00001d014532_P001	Maize	plasma membrane	39.02	39.88
OQU84413	Sorghum	golgi, mitochondrion	38.41	39.38
EER88850	Sorghum	plastid	39.63	39.16
TraesCS6D01G121700.1	Wheat	mitochondrion	38.72	38.84
Zm00001d002066_P001	Maize	plasma membrane	39.63	38.81
TraesCS6A01G131900.1	Wheat	mitochondrion	38.72	38.72
Zm00001d015307_P001	Maize	golgi, mitochondrion, plastid	37.8	38.39
TraesCS6B01G160200.1	Wheat	mitochondrion	38.41	37.95
TraesCS7D01G432300.1	Wheat	golgi, mitochondrion	39.02	37.76
TraesCS7B01G341900.1	Wheat	golgi, mitochondrion	39.33	37.72
TraesCS7A01G443100.1	Wheat	golgi, mitochondrion	39.02	37.54
Os06t0687600-00	Rice	golgi	38.11	37.2
HORVU7Hr1G100750.3	Barley	endoplasmic reticulum	36.59	35.4
Bra013845.1-P	Field mustard	cytosol	19.21	35.2
Bra016131.1-P	Field mustard	endoplasmic reticulum, extracellular	31.1	34.46
Bra030789.1-P	Field mustard	endoplasmic reticulum, golgi	27.74	32.38
Bra034005.1-P	Field mustard	endoplasmic reticulum, golgi	27.44	31.25
Bra034460.1-P	Field mustard	golgi, plasma membrane, vacuole	28.05	30.98
Os02t0158500-00	Rice	plastid	36.89	30.87
Bra004093.1-P	Field mustard	endoplasmic reticulum, golgi	27.13	30.58
Bra028013.1-P	Field mustard	golgi	27.44	30.41
Bra019203.1-P	Field mustard	plastid	28.05	29.49
Bra030066.1-P	Field mustard	endoplasmic reticulum, plasma membrane	25.91	29.41
Bra032854.1-P	Field mustard	endoplasmic reticulum	25.3	28.72

Protein Annotations

MapMan:35.1	EnsemblPlantsGene:Bra013107	EnsemblPlants:Bra013107.1	EnsemblPlants:Bra013107.1-P	GO:GO:0005575	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0045492	InterPro:IRX15/IRX15L/IGXM	UniProt:M4D9E7	PFAM:PF04669	PANTHER:PTHR31444	PANTHER:PTHR31444:SF0
InterPro:Polysacc_synth_dom	TIGRFAMs:TIGR01627	TMHMM:TMhelix	UniParc:UPI0002540A62	SEG:seg	:

Description

AT2G15440 (E=5e-114) | unknown protein

Coordinates

chrA03:-:20437066..20438052

Molecular Weight (calculated)

35772.2 Da

IEP (calculated)

6.434

GRAVY (calculated)

-0.134

Length

328 amino acids

Sequence
(BLAST)

001: MKNNANTNLI LFHHHTPLPS KSASALAAAN HHRLLFIFFL SFFTFLFSLT LFSSSLHSAA TTSHSLSSSS PSSSSLSPPI LAALLHYTSS SPPNTSMSLP
101: ELSAVSTVIN SKGPSCNLLV FGLSHESLLW RSVNLKGRTV FVDENSYAVS KFEQNNPGVE AYDVVYSTKV SQAGKLLGYY KTRPECRPVQ NLLFSDCKLG
201: INDLPNFVYE IEWDVILIDG PRGYAGDSPG RMAPIFTSAV LAKSKDSGKK KTTDVFVHEF GRKLERVYSE EFLCEENLIE VVGELGHFVV AAEKGEKQGN
301: GFCRNSTKLS EPFTPDSGGD AEVGVDDD

Best Arabidopsis Sequence Match ( AT2G15440.1 )
(BLAST)

001: MKSNTNTNLI LFHHHSPLTS KSPSAVAAAN HHRFLFIFFL SFFTLLFSFS LFSSSIHSTT SSHSLSSSPS SSSLPPPVLA ALLHYTSSSP PNTSMSFLEL
101: STISNIIHSH GPACNLLIFG LTHESLLWRS INFQGRTVFV DESPYSVSKF EQSNPGVEAY EVVYSTKVSQ AKKLLGYYKT RPECRPVQNL LFSDCKLGIN
201: DLPNFVYEID WDVILIDGPR GYASDSPGRM APIFTSAVLA KSKDFGTKTK KTDVLVHEFG RKIERVYSEE FLCEENLIEV VGDLGHFVVA AAEERESYGD
301: GFCRNSTRLS ESFTAVSGGD EEKVGVDDE

Arabidopsis Description

At2g15440 [Source:UniProtKB/TrEMBL;Acc:Q9SJN8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.