Factsheet for HORVU0Hr1G015370.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol

Predictor Summary:

cytosol 1
extracellular 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular
Any Predictor:	cytosol, extracellular
MultiLoc:	cytosol
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU7Hr1G088900.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G67210.1	HORVU7Hr1G088900.1	AT4G19030.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G131900.1	Wheat	mitochondrion	94.98	69.21
TraesCS6D01G121700.1	Wheat	mitochondrion	94.56	69.11
TraesCS6B01G160200.1	Wheat	mitochondrion	95.82	68.98
OQU84413	Sorghum	golgi, mitochondrion	82.85	61.88
Zm00001d015307_P001	Maize	golgi, mitochondrion, plastid	82.01	60.68
VIT_03s0063g00030.t01	Wine grape	plastid	47.7	51.82
Os02t0158500-00	Rice	plastid	82.85	50.51
HORVU7Hr1G100750.3	Barley	endoplasmic reticulum	70.71	49.85
HORVU2Hr1G113560.1	Barley	golgi, plasma membrane	61.92	49.17
GSMUA_Achr9P25260_001	Banana	golgi	65.69	47.87
GSMUA_Achr8P03360_001	Banana	golgi	64.02	46.65
GSMUA_Achr6P29610_001	Banana	endoplasmic reticulum, golgi, plastid	62.34	45.71
GSMUA_Achr10P...	Banana	extracellular, plasma membrane, plastid	53.56	44.44
KRH50341	Soybean	golgi, plastid	51.05	39.23
PGSC0003DMT400066571	Potato	endoplasmic reticulum, golgi, mitochondrion, plastid	50.63	38.53
PGSC0003DMT400065494	Potato	golgi, plasma membrane, plastid	48.54	38.41
Solyc01g107800.2.1	Tomato	endoplasmic reticulum, golgi, mitochondrion, plastid	50.21	38.22
CDX81329	Canola	plastid	48.54	37.66
KRH28432	Soybean	mitochondrion	48.54	37.66
KRH77040	Soybean	mitochondrion	47.7	37.5
VIT_07s0031g00110.t01	Wine grape	golgi	48.54	37.42
PGSC0003DMT400064322	Potato	plastid	48.12	37.34
KRH70689	Soybean	plastid	50.21	37.15
Solyc02g093090.1.1	Tomato	extracellular, nucleus	47.7	37.01
Bra012143.1-P	Field mustard	plastid	48.54	36.83
AT5G67210.1	Thale cress	endoplasmic reticulum, golgi, mitochondrion, plastid	48.54	36.59
CDY12819	Canola	golgi, mitochondrion, plasma membrane, plastid	48.12	36.51
KRH57814	Soybean	mitochondrion	48.12	36.39
CDY01429	Canola	golgi, mitochondrion, plasma membrane, plastid	47.7	36.19
AT3G50220.1	Thale cress	endoplasmic reticulum, golgi	48.54	36.02
CDY30600	Canola	endoplasmic reticulum, golgi	48.54	35.8
CDY17753	Canola	endoplasmic reticulum, golgi	48.54	35.8
Bra036059.1-P	Field mustard	endoplasmic reticulum, golgi, plastid	48.54	35.8
KRH04549	Soybean	plastid	46.86	35.56
Bra039840.1-P	Field mustard	plastid	47.7	35.08
CDY62313	Canola	plastid	46.86	35.0
CDY37228	Canola	plastid	46.03	34.06
CDY13145	Canola	plastid	46.03	33.54
Bra013107.1-P	Field mustard	plastid	46.03	33.54
CDX89660	Canola	plastid	46.03	33.23
AT2G15440.1	Thale cress	plastid	45.61	33.13
HORVU5Hr1G080580.1	Barley	endoplasmic reticulum, mitochondrion, plastid	38.91	31.0
HORVU3Hr1G108120.1	Barley	extracellular, plasma membrane, vacuole	37.24	30.48
HORVU7Hr1G120340.1	Barley	plastid	40.17	26.89
HORVU4Hr1G015310.3	Barley	endoplasmic reticulum, plastid	39.75	26.84
HORVU2Hr1G089430.1	Barley	endoplasmic reticulum, peroxisome, plastid	37.24	26.18

Protein Annotations

EnsemblPlants:HORVU0Hr1G015370.1	EnsemblPlantsGene:HORVU0Hr1G015370	GO:GO:0005575	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0045492	InterPro:IRX15/IRX15L/IGXM	InterPro:Polysacc_synth_dom
PANTHER:PTHR31444	PANTHER:PTHR31444:SF19	PFAM:PF04669	SEG:seg	TIGRFAMs:TIGR01627	UniParc:UPI000B45FC34
UniProt:A0A287E249	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chrchrUn:+:83968868..83969979

Molecular Weight (calculated)

25697.5 Da

IEP (calculated)

5.624

GRAVY (calculated)

-0.057

Length

239 amino acids

Sequence
(BLAST)

001: GLPAYVFDAL VRYAAAAGAN STVSMPEGDV RAIAAVLRRR APCNLLVFGL GAETPLWRAL NHGGRTVFLD ENPFYVAHME GAHGGLEAYD VAYATAVREL
101: PDLLDAARAS RRAECRPVQN LLFSDCRLAI GDLPNQLYEV AWDVILVDGP HGYAEGSPGR MAAIYSSAVM ARTKGTVTDV LVHDYEREVE SVCAREFLCD
201: ENRVEGTTTP SLGHYILRGG AAANREAFCG APPSTKKAN

Best Arabidopsis Sequence Match ( AT5G67210.1 )
(BLAST)

001: MKSGGNTNTK LILVHPYIQK QTSTNRLWLL AFVSFFTIAF LLTLLYTTDS IISSKNNSAT VSSAVNSAVT TATISQLPTT AINAMLHYAS RSNDSYHMSY
101: GEMKSISDVL RRCSPPCNLL VFGLTHETLL WKSLNHNGRT VFIEENRYYA AYFEEIHPEI EVFDVQYTTK AREARELVSA VKEAARNECR PVQNLLFSDC
201: KLGLNDLPNH VYDVDWDVIL VDGPRGDGGD VPGRMSSIFT AAVLARSKKG GNPKTHVFVH DYYRDVERLC GDEFLCRENL VESNDLLAHY VLEKMDKNST
301: QFCRGRKKKR SVSSPSA

Arabidopsis Description

IRX15-LIRX15-L [Source:UniProtKB/TrEMBL;Acc:A0A178UEM8]
SUBAcon: [mitochondrion,endoplasmic reticulum,golgi,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.