Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, cytosol
Predictor Summary:
Predictor Summary:
- golgi 1
- plasma membrane 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G272700.1 | Wheat | plasma membrane | 71.09 | 53.76 |
| TraesCS7D01G367800.1 | Wheat | golgi, peroxisome, plasma membrane | 70.62 | 53.41 |
| TraesCS7A01G355000.1 | Wheat | peroxisome | 69.67 | 52.69 |
| Os06t0552700-01 | Rice | cytosol, peroxisome, plastid | 51.18 | 39.56 |
| KXG20157 | Sorghum | golgi, nucleus, plasma membrane | 49.76 | 36.08 |
| Zm00001d046303_P001 | Maize | golgi, peroxisome, plasma membrane | 43.13 | 28.71 |
| HORVU0Hr1G017130.2 | Barley | endoplasmic reticulum, golgi, peroxisome | 19.91 | 28.0 |
| HORVU7Hr1G043590.2 | Barley | plasma membrane | 40.76 | 27.83 |
| KRH59035 | Soybean | plasma membrane | 35.07 | 27.31 |
| HORVU7Hr1G121250.3 | Barley | cytosol, golgi, plasma membrane | 37.44 | 27.05 |
| HORVU7Hr1G043600.1 | Barley | golgi, peroxisome | 40.76 | 26.96 |
| KRH42923 | Soybean | extracellular | 34.6 | 26.94 |
| KRH21197 | Soybean | cytosol, peroxisome, plasma membrane | 34.12 | 26.37 |
| KRH59036 | Soybean | plasma membrane | 33.65 | 26.3 |
| KRH42926 | Soybean | plasma membrane | 34.12 | 26.28 |
| KRH11076 | Soybean | cytosol | 33.65 | 26.01 |
| PGSC0003DMT400071510 | Potato | plasma membrane | 34.12 | 25.99 |
| VIT_10s0003g01830.t01 | Wine grape | cytosol, peroxisome, plasma membrane, plastid | 34.6 | 25.89 |
| AT4G18910.1 | Thale cress | golgi, peroxisome, vacuole | 35.55 | 25.51 |
| Solyc03g005980.2.1 | Tomato | plasma membrane | 33.18 | 25.27 |
| PGSC0003DMT400073246 | Potato | plasma membrane | 34.6 | 25.17 |
| Solyc02g071920.2.1 | Tomato | plasma membrane | 34.6 | 25.17 |
| CDX78905 | Canola | cytosol, peroxisome, plasma membrane | 34.6 | 24.58 |
| CDX99411 | Canola | cytosol, peroxisome, plasma membrane | 34.12 | 24.24 |
| CDX98596 | Canola | cytosol, peroxisome, plasma membrane | 34.12 | 24.16 |
| Bra012567.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 34.12 | 24.16 |
| CDY01565 | Canola | cytosol, peroxisome, plasma membrane | 34.12 | 24.16 |
| Bra013361.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 33.65 | 23.91 |
| AT4G19030.1 | Thale cress | plasma membrane | 33.18 | 23.65 |
| HORVU5Hr1G085710.3 | Barley | cytosol, peroxisome, plasma membrane | 36.97 | 23.42 |
| HORVU7Hr1G038220.1 | Barley | endoplasmic reticulum, golgi, peroxisome | 27.49 | 19.33 |
| HORVU6Hr1G075850.4 | Barley | nucleus, plasma membrane, vacuole | 26.07 | 17.3 |
| HORVU3Hr1G079560.5 | Barley | golgi, plasma membrane | 19.43 | 16.6 |
| HORVU3Hr1G014440.3 | Barley | golgi, mitochondrion, plasma membrane | 18.96 | 15.5 |
| HORVU7Hr1G038270.3 | Barley | endoplasmic reticulum, golgi, vacuole | 26.54 | 15.3 |
| HORVU3Hr1G001320.1 | Barley | plasma membrane, vacuole | 17.54 | 13.36 |
| HORVU1Hr1G047100.3 | Barley | plastid | 22.75 | 13.08 |
| KRH45251 | Soybean | extracellular | 5.21 | 12.09 |
| HORVU7Hr1G072160.1 | Barley | extracellular, golgi | 3.79 | 9.64 |
| HORVU3Hr1G001420.2 | Barley | nucleus | 7.58 | 7.34 |
| GSMUA_Achr4P10230_001 | Banana | plastid | 9.48 | 6.37 |
Protein Annotations
| Gene3D:1.20.1080.10 | MapMan:35.1 | UniProt:A0A287X8P9 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015267 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0055085 | EnsemblPlantsGene:HORVU7Hr1G088900 | EnsemblPlants:HORVU7Hr1G088900.1 | InterPro:IPR023271 | InterPro:MIP |
| InterPro:MIP_CS | PFAM:PF00230 | PRINTS:PR00783 | ScanProsite:PS00221 | PANTHER:PTHR19139 | PANTHER:PTHR19139:SF183 |
| SUPFAM:SSF81338 | TMHMM:TMhelix | UniParc:UPI000B466FCF | SEG:seg | : | : |
Description
No Description!
Coordinates
chrchr7H:+:539913399..539914677
Molecular Weight (calculated)
22708.9 Da
IEP (calculated)
7.838
GRAVY (calculated)
-0.138
Length
211 amino acids
Sequence
(BLAST)
(BLAST)
001: MARRDDDSAY TNGSVSVNDF SVEDGRKEKE VSADYHPDED MVCGFPVSVS FLQMLLAELF STFFLLFAGM GAIVVNGEKQ GAVTFPGITV VWGMAVMVMV
101: YTVGHISGAH MNPAVTVGFA IARRFPWRRV SAGVHGGADG GRADSELSAA ADVRREARVR AGDAAHGLQP PVARDGVHHH FLPRLRHHGR GYRRPSVGAD
201: GWAGCGRNHH A
101: YTVGHISGAH MNPAVTVGFA IARRFPWRRV SAGVHGGADG GRADSELSAA ADVRREARVR AGDAAHGLQP PVARDGVHHH FLPRLRHHGR GYRRPSVGAD
201: GWAGCGRNHH A
001: MSSHSDEIEE EQISRIEKGK GKDCQGGIET VICTSPSIVC LTQKLIAEMI GTYFIVFSGC GVVVVNVLYG GTITFPGICV TWGLIVMVMI YSTGHISGAH
101: FNPAVTVTFA IFRRFPWHQV PLYIGAQFAG SLLASLTLRL MFKVTPEAFF GTTPADSPAR ALVAEIIISF LLMFVISGVA TDNRAVGELA GIAVGMTIMV
201: NVFVAGPISG ASMNPARSLG PALVMGVYKH IWVYIVGPVL GVISGGFVYN LIRFTDKPLR ELTKSASFLR AVSPSHKGSS SKT
101: FNPAVTVTFA IFRRFPWHQV PLYIGAQFAG SLLASLTLRL MFKVTPEAFF GTTPADSPAR ALVAEIIISF LLMFVISGVA TDNRAVGELA GIAVGMTIMV
201: NVFVAGPISG ASMNPARSLG PALVMGVYKH IWVYIVGPVL GVISGGFVYN LIRFTDKPLR ELTKSASFLR AVSPSHKGSS SKT
Arabidopsis Description
NIP4-1Putative aquaporin NIP4-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIZ9]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.