Factsheet for HORVU4Hr1G072520.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
TargetP:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU2Hr1G074990.1
HORVU2Hr1G091830.4
HORVU6Hr1G060760.3
HORVU7Hr1G071270.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G16800.1	HORVU2Hr1G074990.1	AT2G23420.1	21798944
AT2G16800.1	HORVU2Hr1G091830.4	AT3G60600.1	21798944
AT2G16800.1	HORVU6Hr1G060760.3	AT3G60600.1	21798944
AT2G16800.1	HORVU7Hr1G071270.2	AT3G60600.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G033400.1	Wheat	mitochondrion	65.12	80.82
TraesCS4D01G271200.1	Wheat	plastid	65.34	80.65
TraesCS4B01G272000.1	Wheat	mitochondrion, plastid	64.68	80.49
Zm00001d027721_P001	Maize	plastid	53.64	68.26
Os03t0156700-01	Rice	mitochondrion	53.42	67.98
EER92833	Sorghum	plastid	52.54	65.93
CDY17509	Canola	extracellular	11.48	64.2
GSMUA_Achr3P00650_001	Banana	mitochondrion	33.55	60.32
KRH39780	Soybean	plastid	39.96	54.85
Bra034673.1-P	Field mustard	mitochondrion	10.38	52.22
CDX76312	Canola	cytosol	6.62	51.72
PGSC0003DMT400038459	Potato	plastid	43.49	51.71
KRH24328	Soybean	plastid	41.72	50.94
PGSC0003DMT400015782	Potato	plastid	41.94	50.94
Solyc08g005980.2.1	Tomato	plastid	43.05	50.91
CDY47481	Canola	plastid	41.06	50.82
Bra037287.1-P	Field mustard	plastid	41.06	50.82
CDY26789	Canola	plastid	41.28	50.68
KRH51392	Soybean	plastid	41.5	50.67
VIT_03s0038g02470.t01	Wine grape	plastid	42.6	50.52
Solyc01g111620.2.1	Tomato	plastid	41.94	50.4
AT2G16800.1	Thale cress	plastid	41.28	50.27
KRH60695	Soybean	plastid	41.72	49.87
GSMUA_Achr1P07500_001	Banana	plastid	38.63	49.86
CDX69110	Canola	plastid	39.51	49.45
Bra011583.1-P	Field mustard	plastid	38.41	48.88
VIT_18s0001g14840.t01	Wine grape	plastid	41.28	48.83
AT4G35080.3	Thale cress	plastid	40.62	47.3
CDY52650	Canola	plastid	39.51	47.23
GSMUA_AchrUn_...	Banana	plastid	30.46	44.81
CDY17508	Canola	extracellular	15.01	28.94

Protein Annotations

EnsemblPlants:HORVU4Hr1G072520.2	EnsemblPlantsGene:HORVU4Hr1G072520	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	PANTHER:PTHR33876
PANTHER:PTHR33876:SF2	PFAM:PF13386	SEG:seg	TMHMM:TMhelix	UniParc:UPI000B465791	UniProt:A0A287PN20
MapMan:24.2.6.3	:	:	:	:	:

Description

No Description!

Coordinates

chrchr4H:+:585753014..585756569

Molecular Weight (calculated)

47697.3 Da

IEP (calculated)

11.330

GRAVY (calculated)

0.148

Length

453 amino acids

Sequence
(BLAST)

001: FFNNSRPKIL TSMFDISPIE NPSTTTYRGK LVTRERARRT TTTSPATQPG PNNPVRPPPR RAVPCRAARN QPANQPTRTT ARRSQPPRPE SWQARSLSTP
101: LGLSSPPPPH GAMERLISRT AVSPAQPRIH LPGRSPFLPT RRAAPASGGA GFGSAAPWAR LCAXAAAAAA GPPWKLLGSL LPKASTAALV LLMTLTASAF
201: HSSIPHPAYA SVQTVIKSGG LLSTELLSSG WAGFFAGCLH TLSGPDHLVA LAPLSIGRSR LESGLVGALW GCGHDAGQII FGLLFLLLKD RLHIEVLRIW
301: GTRVVGLTLL MIGATGIREA SEVQESGLIL EGVDMSGGEP LQQSPAVAPR KKKVGFTTFA TGVVHGLQPD ALLMVLPALA LPSRFAGAAY LGMFLVGTVF
401: SMGSYTAFVG SCSEALKDRI PKITEKLTWA ASLVAVCMGL ALLVGQFFGF TLY

Best Arabidopsis Sequence Match ( AT2G16800.1 )
(BLAST)

001: MDRLLQPPSS HSIAPSKFQS RPSPLLLHRL HSTNLSTFPS SRRLESRRIS SISCFFRQNP SPDTSPGLNQ SSNFLIASSQ TDASKPNPGF IQRIVSSFEQ
101: RKTISAGMVI LVSAIAALLL NPILVPPAFA SFQTATNSGG AAVVGGKLLR TEVLTSAWTG FFAGCLHTLS GPDHLAALAP LSIGRTRMES AAVGALWGCG
201: HDAGQLIFGL LFLLLKDRLH IEVIRTWGTR VVGLTLLVIG AMGIKEASEM PEPCVVTLEN GETDEKSLKK KKIGFATFAT GIVHGLQPDA LMMVLPALAL
301: PSRIAGASFL IMFLIGTVIA MGSYTVFIGS CSEALKEKVP RITEKLTWAS SLVAIGLGLA IIVSQFFGFS LY

Arabidopsis Description

Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q9SLD9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.