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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 8
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:mitochondrion, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:plastid
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY47481 Canola plastid 79.03 80.33
Bra037287.1-P Field mustard plastid 78.76 80.05
CDY26789 Canola plastid 77.96 78.59
KRH39780 Soybean plastid 58.87 66.36
PGSC0003DMT400015782 Potato plastid 65.32 65.15
GSMUA_Achr3P00650_001 Banana mitochondrion 43.82 64.68
Solyc01g111620.2.1 Tomato plastid 65.05 64.19
KRH24328 Soybean plastid 63.71 63.88
AT4G35080.3 Thale cress plastid 66.67 63.75
KRH51392 Soybean plastid 61.29 61.46
KRH60695 Soybean plastid 61.83 60.69
VIT_18s0001g14840.t01 Wine grape plastid 62.1 60.31
Solyc08g005980.2.1 Tomato plastid 61.29 59.53
PGSC0003DMT400038459 Potato plastid 60.48 59.06
Os06t0116400-01 Rice mitochondrion, plastid 56.45 57.22
GSMUA_Achr1P07500_001 Banana plastid 52.15 55.27
Os03t0156700-01 Rice mitochondrion 51.88 54.21
EER92833 Sorghum plastid 52.42 54.02
Zm00001d027721_P001 Maize plastid 51.61 53.93
EER89091 Sorghum mitochondrion 52.69 51.99
TraesCS4B01G272000.1 Wheat mitochondrion, plastid 50.0 51.1
TraesCS4A01G033400.1 Wheat mitochondrion 50.0 50.96
TraesCS4D01G271200.1 Wheat plastid 50.27 50.95
TraesCS7D01G044600.1 Wheat plastid 51.61 49.23
TraesCS4A01G435600.1 Wheat plastid 51.34 49.23
GSMUA_AchrUn_... Banana plastid 40.59 49.03
TraesCS7A01G049500.1 Wheat plastid 50.81 48.21
HORVU4Hr1G072520.2 Barley plastid 50.27 41.28
Protein Annotations
MapMan:24.2.6.3EntrezGene:816181ProteinID:AAD24613.1ProteinID:AEC06540.1ArrayExpress:AT2G16800EnsemblPlantsGene:AT2G16800
RefSeq:AT2G16800TAIR:AT2G16800RefSeq:AT2G16800-TAIR-GEnsemblPlants:AT2G16800.1TAIR:AT2G16800.1Unigene:At.21095
GO:GO:0005575GO:GO:0016020GO:GO:0016021RefSeq:NP_565394.1PFAM:PF13386PO:PO:0000013
PO:PO:0000037PO:PO:0000230PO:PO:0000293PO:PO:0001054PO:PO:0001078PO:PO:0001081
PO:PO:0001185PO:PO:0004507PO:PO:0007064PO:PO:0007095PO:PO:0007098PO:PO:0007103
PO:PO:0007115PO:PO:0007123PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009005
PO:PO:0009006PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009030
PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020030
PO:PO:0020038PO:PO:0020100PO:PO:0020137PO:PO:0025022PO:PO:0025281PANTHER:PTHR33876
PANTHER:PTHR33876:SF2UniProt:Q9SLD9TMHMM:TMhelixUniParc:UPI000009D42DSEG:seg:
Description
Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q9SLD9]
Coordinates
chr2:+:7285698..7287393
Molecular Weight (calculated)
39689.8 Da
IEP (calculated)
10.216
GRAVY (calculated)
0.374
Length
372 amino acids
Sequence
(BLAST)
001: MDRLLQPPSS HSIAPSKFQS RPSPLLLHRL HSTNLSTFPS SRRLESRRIS SISCFFRQNP SPDTSPGLNQ SSNFLIASSQ TDASKPNPGF IQRIVSSFEQ
101: RKTISAGMVI LVSAIAALLL NPILVPPAFA SFQTATNSGG AAVVGGKLLR TEVLTSAWTG FFAGCLHTLS GPDHLAALAP LSIGRTRMES AAVGALWGCG
201: HDAGQLIFGL LFLLLKDRLH IEVIRTWGTR VVGLTLLVIG AMGIKEASEM PEPCVVTLEN GETDEKSLKK KKIGFATFAT GIVHGLQPDA LMMVLPALAL
301: PSRIAGASFL IMFLIGTVIA MGSYTVFIGS CSEALKEKVP RITEKLTWAS SLVAIGLGLA IIVSQFFGFS LY
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.