Factsheet for Os06t0116400-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 4
mitochondrion 4
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os02t0643000-01
Os03t0837300-02
Os04t0429800-01
Os04t0534400-01
Os08t0156700-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G16800.1	Os03t0837300-02	AT2G23420.1	21798944
AT2G16800.1	Os04t0429800-01	AT2G23420.1	21798944
AT2G16800.1	Os02t0643000-01	AT3G60600.1	21798944
AT2G16800.1	Os04t0534400-01	AT3G60600.1	21798944
AT2G16800.1	Os08t0156700-01	AT3G60600.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY17509	Canola	extracellular	16.62	75.31
EER89091	Sorghum	mitochondrion	70.3	68.44
GSMUA_Achr3P00650_001	Banana	mitochondrion	45.78	66.67
KRH39780	Soybean	plastid	56.4	62.73
TraesCS7D01G044600.1	Wheat	plastid	64.03	60.26
KRH24328	Soybean	plastid	59.95	59.3
TraesCS4A01G435600.1	Wheat	plastid	62.4	59.02
TraesCS7A01G049500.1	Wheat	plastid	62.13	58.16
CDY47481	Canola	plastid	57.77	57.92
Os03t0156700-01	Rice	mitochondrion	56.13	57.87
GSMUA_Achr1P07500_001	Banana	plastid	55.31	57.83
Bra037287.1-P	Field mustard	plastid	57.49	57.65
Bra011583.1-P	Field mustard	plastid	55.86	57.58
VIT_03s0038g02470.t01	Wine grape	plastid	59.67	57.33
PGSC0003DMT400015782	Potato	plastid	57.77	56.84
Solyc01g111620.2.1	Tomato	plastid	58.31	56.76
CDY26789	Canola	plastid	56.95	56.64
CDX69110	Canola	plastid	55.86	56.63
AT2G16800.1	Thale cress	plastid	57.22	56.45
KRH51392	Soybean	plastid	56.95	56.33
KRH60695	Soybean	plastid	57.22	55.41
CDY52650	Canola	plastid	56.13	54.35
PGSC0003DMT400038459	Potato	plastid	56.4	54.33
Solyc08g005980.2.1	Tomato	plastid	56.13	53.79
VIT_18s0001g14840.t01	Wine grape	plastid	55.86	53.52
Bra034673.1-P	Field mustard	mitochondrion	12.81	52.22
AT4G35080.3	Thale cress	plastid	54.77	51.67
GSMUA_AchrUn_...	Banana	plastid	42.78	50.97
CDX76312	Canola	cytosol	7.9	50.0
CDY17508	Canola	extracellular	21.53	33.62

Protein Annotations

EMBL:AK105979	EMBL:EU430513	EnsemblPlants:Os06t0116400-01	EnsemblPlantsGene:Os06g0116400	EntrezGene:4339930	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	PANTHER:PTHR33876	PANTHER:PTHR33876:SF2	ProteinID:BAC22212.1	ProteinID:BAF18534.1
ProteinID:BAS95849.1	RefSeq:XP_015641669.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI00000AD4C4	UniProt:Q8H658
MapMan:24.2.6.3	:	:	:	:	:

Description

ZEBRA-NECROSISNickel/cobalt transporter, high-affinity domain containing protein. (Os06t0116400-01);Nickel/cobalt transporter, high-affinity domain containing protein. (Os06t0116400-02)

Coordinates

chr6:-:908856..910322

Molecular Weight (calculated)

37699.4 Da

IEP (calculated)

10.818

GRAVY (calculated)

0.453

Length

367 amino acids

Sequence
(BLAST)

001: MAMERLISSP LLPRRPPRAA FSRPPPSLAA APPHHRAGGA ASGYGSRPPL ASLLLSRHHH HHQPPVLAAN PAADVAAGEA VPPATATASR RFLQKVASAA
101: AATLLATIAL TLIQPAWAPP ALASFHSAAK AGGGIFKSEL LSSAWTGFLA GCLHTLSGPD HLAALAPLSI GRSRVESAAV GALWGCGHDA GQVIFGLLFL
201: SLKDRLHIEV IRTWGTRVVG LTLLVIGALG IREATEVPTP CVALENGGGG GGAHRGPLDA LPATRKKITF ATFATGIVHG LQPDALMMVL PALALPSRVA
301: GAAFLGMFLV GTVVAMGSYT VLIGSCTEAL KERVPRITEK LTWAASLVAI SMGLGILISQ SLGFSLY

Best Arabidopsis Sequence Match ( AT2G16800.1 )
(BLAST)

001: MDRLLQPPSS HSIAPSKFQS RPSPLLLHRL HSTNLSTFPS SRRLESRRIS SISCFFRQNP SPDTSPGLNQ SSNFLIASSQ TDASKPNPGF IQRIVSSFEQ
101: RKTISAGMVI LVSAIAALLL NPILVPPAFA SFQTATNSGG AAVVGGKLLR TEVLTSAWTG FFAGCLHTLS GPDHLAALAP LSIGRTRMES AAVGALWGCG
201: HDAGQLIFGL LFLLLKDRLH IEVIRTWGTR VVGLTLLVIG AMGIKEASEM PEPCVVTLEN GETDEKSLKK KKIGFATFAT GIVHGLQPDA LMMVLPALAL
301: PSRIAGASFL IMFLIGTVIA MGSYTVFIGS CSEALKEKVP RITEKLTWAS SLVAIGLGLA IIVSQFFGFS LY

Arabidopsis Description

Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q9SLD9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.