CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69110	Canola	plastid	90.12	20.17
CDY52650	Canola	plastid	91.36	19.53
AT4G35080.3	Thale cress	plastid	90.12	18.77
CDY47481	Canola	plastid	79.01	17.49
CDY26789	Canola	plastid	79.01	17.34
Os06t0116400-01	Rice	mitochondrion, plastid	75.31	16.62
EER92833	Sorghum	plastid	71.6	16.07
PGSC0003DMT400038459	Potato	plastid	75.31	16.01
Solyc08g005980.2.1	Tomato	plastid	75.31	15.93
PGSC0003DMT400015782	Potato	plastid	72.84	15.82
Zm00001d027721_P001	Maize	plastid	69.14	15.73
Solyc01g111620.2.1	Tomato	plastid	72.84	15.65
VIT_18s0001g14840.t01	Wine grape	plastid	72.84	15.4
EER89091	Sorghum	mitochondrion	71.6	15.38
Os03t0156700-01	Rice	mitochondrion	66.67	15.17
GSMUA_Achr3P00650_001	Banana	mitochondrion	45.68	14.68
TraesCS4A01G033400.1	Wheat	mitochondrion	65.43	14.52
TraesCS4B01G272000.1	Wheat	mitochondrion, plastid	64.2	14.29
TraesCS4D01G271200.1	Wheat	plastid	64.2	14.17
TraesCS4A01G435600.1	Wheat	plastid	64.2	13.4
TraesCS7D01G044600.1	Wheat	plastid	64.2	13.33
TraesCS7A01G049500.1	Wheat	plastid	64.2	13.27
GSMUA_Achr1P07500_001	Banana	plastid	51.85	11.97
HORVU4Hr1G072520.2	Barley	plastid	64.2	11.48
GSMUA_AchrUn_...	Banana	plastid	35.8	9.42
CDX76312	Canola	cytosol	6.17	8.62
CDY17508	Canola	extracellular	0.0	0.0

Protein Annotations

EnsemblPlants:CDY17509	EnsemblPlantsGene:GSBRNA2T00095705001	GO:A0A078FWK2	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
PANTHER:PTHR33876	PANTHER:PTHR33876:SF2	ProteinID:CDY17509	ProteinID:CDY17509.1	TMHMM:TMhelix	UniParc:UPI0004EDBCEE
UniProt:A0A078FWK2	MapMan:24.2.6.3	:	:	:	:

Description

BnaC03g65540DBnaC03g65540D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FWK2]

Coordinates

chrLK032074:+:432059..432304

Molecular Weight (calculated)

8695.1 Da

IEP (calculated)

8.762

GRAVY (calculated)

1.122

Length

81 amino acids

Sequence
(BLAST)

1: MTVLPALALP SRLAGFAFLI MFLVGTVVAM GSYTAFIGSC CEALKEKMPR ITEKLTWVSS IMAIGLGLGI VISPFFGFNL Y

Best Arabidopsis Sequence Match ( AT4G35080.1 )
(BLAST)

001: MERLLQPSSS SSSISPSKFP SRTSPFLPRL RSSGLSFVST HRPESRRVSS ISCNSSQIPS LYTPIGSNTT NNSFNGSPKS DESKPNPGFL TRIATSASEQ
101: RKTLSTGTVI LISAVAVLLL NPLLAPPAFA SFQTAAKSGW LTSAWTGFLA GCLHTLSGPD HLAALAPLSI GRSKMESAAV GALWGCGHDA GQVIFGLLFL
201: LLKDRLHIEV LQTWGTRIVG LTLVIIGAMG IKEASEIPEP CVALETDISM VSTEKEALPL PKKKKIGFAT FATGVVHGLQ PDALMIVLPA LALPSRLAGS
301: AFLIMFLVGT VIAMGSYTAF IGSCSEALKE KVPRITEKLT WVSSLVAIGL GLGIVISPFF GFSLY

Arabidopsis Description

High-affinity nickel-transport family protein [Source:UniProtKB/TrEMBL;Acc:F4JM82]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.