CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra011583.1-P	Field mustard	plastid	91.56	97.47
CDX69110	Canola	plastid	89.71	93.92
CDY17509	Canola	extracellular	19.53	91.36
AT4G35080.3	Thale cress	plastid	78.1	76.09
CDY47481	Canola	plastid	65.96	68.31
CDY26789	Canola	plastid	65.96	67.75
GSMUA_Achr3P00650_001	Banana	mitochondrion	41.42	62.3
PGSC0003DMT400015782	Potato	plastid	59.63	60.59
Solyc01g111620.2.1	Tomato	plastid	59.37	59.68
CDX76312	Canola	cytosol	8.97	58.62
Solyc08g005980.2.1	Tomato	plastid	56.99	56.4
Os06t0116400-01	Rice	mitochondrion, plastid	54.35	56.13
PGSC0003DMT400038459	Potato	plastid	55.15	54.86
EER92833	Sorghum	plastid	51.98	54.57
VIT_18s0001g14840.t01	Wine grape	plastid	54.88	54.31
Zm00001d027721_P001	Maize	plastid	50.66	53.93
GSMUA_Achr1P07500_001	Banana	plastid	48.55	52.42
Os03t0156700-01	Rice	mitochondrion	49.08	52.25
TraesCS4A01G033400.1	Wheat	mitochondrion	48.55	50.41
TraesCS4D01G271200.1	Wheat	plastid	48.55	50.14
TraesCS4B01G272000.1	Wheat	mitochondrion, plastid	48.02	50.0
EER89091	Sorghum	mitochondrion	49.6	49.87
TraesCS7A01G049500.1	Wheat	plastid	50.13	48.47
TraesCS7D01G044600.1	Wheat	plastid	49.87	48.46
TraesCS4A01G435600.1	Wheat	plastid	49.34	48.2
GSMUA_AchrUn_...	Banana	plastid	37.2	45.78
CDY17508	Canola	extracellular	25.07	40.43
HORVU4Hr1G072520.2	Barley	plastid	47.23	39.51

Protein Annotations

EnsemblPlants:CDY52650	EnsemblPlantsGene:GSBRNA2T00007452001	GO:A0A078INL2	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
PANTHER:PTHR33876	PANTHER:PTHR33876:SF2	PFAM:PF13386	ProteinID:CDY52650	ProteinID:CDY52650.1	SEG:seg
TMHMM:TMhelix	UniParc:UPI0004EE1C04	UniProt:A0A078INL2	MapMan:24.2.6.3	:	:

Description

BnaAnng11650DBnaAnng11650D protein [Source:UniProtKB/TrEMBL;Acc:A0A078INL2]

Coordinates

chrLK033111:-:47613..49500

Molecular Weight (calculated)

39950.4 Da

IEP (calculated)

10.397

GRAVY (calculated)

0.507

Length

379 amino acids

Sequence
(BLAST)

001: MERLLQPPSS STISSPKFPS RASPFLPRLR SSSLGFVSSR RVSSVSCSSS FWNQSACTPK RCNLAINSLN GESKANPGSL QRIVGAVSKK RKVETLQFIS
101: FILTSKAKTL LFISFALSTG TVILISAVAA LLLNPLLAPP AFASFQTAAK TGWLASAWTG FLAGCLHTLS GPDHLAALAP LSIGRTKMES AAVGALWGCG
201: HDAGQVIFGL LFLLLKDRLH IEVLQTWGTR IVGLTLVIIG AMGIKEASEA PEPCVALETD MSGMVPAEKE ALSPPKKKKI GFATFATGVV HGLQPDALMI
301: VLPALALPSR LAGSAFLIMF LVGTVVAMGS YTAFIGSCSE ALKEKVPRIT EKLTWVSSLV AIGLGLGIVI SPFFGFSLY

Best Arabidopsis Sequence Match ( AT4G35080.3 )
(BLAST)

001: MERLLQPSSS SSSISPSKFP SRTSPFLPRL RSSGLSFVST HRPESRRVSS ISCNSSQIPS LYTPIGSNTT NNSFNGSPKS DESKPNPGFL TRIATSASEQ
101: RKETYEKFVY SLLEKKIPRI TKSSNFTLST GTVILISAVA VLLLNPLLAP PAFASFQTAA KSGWLTSAWT GFLAGCLHTL SGPDHLAALA PLSIGRSKME
201: SAAVGALWGC GHDAGQVIFG LLFLLLKDRL HIEVLQTWGT RIVGLTLVII GAMGIKEASE IPEPCVALET DISMVSTEKE ALPLPKKKKI GFATFATGVV
301: HGLQPDALMI VLPALALPSR LAGSAFLIMF LVGTVIAMGS YTAFIGSCSE ALKEKVPRIT EKLTWVSSLV AIGLGLGIVI SPFFGFSLY

Arabidopsis Description

High-affinity nickel-transport family protein [Source:UniProtKB/TrEMBL;Acc:F4JM82]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.