Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra034673.1-P | Field mustard | mitochondrion | 98.28 | 63.33 |
| GSMUA_Achr3P00650_001 | Banana | mitochondrion | 51.72 | 11.9 |
| CDX69110 | Canola | plastid | 58.62 | 9.39 |
| CDY47481 | Canola | plastid | 56.9 | 9.02 |
| Os03t0156700-01 | Rice | mitochondrion | 55.17 | 8.99 |
| CDY52650 | Canola | plastid | 58.62 | 8.97 |
| CDY26789 | Canola | plastid | 56.9 | 8.94 |
| KRH51392 | Soybean | plastid | 56.9 | 8.89 |
| EER92833 | Sorghum | plastid | 55.17 | 8.86 |
| Solyc08g005980.2.1 | Tomato | plastid | 56.9 | 8.62 |
| GSMUA_Achr1P07500_001 | Banana | plastid | 51.72 | 8.55 |
| KRH39780 | Soybean | plastid | 48.28 | 8.48 |
| KRH60695 | Soybean | plastid | 55.17 | 8.44 |
| Zm00001d027721_P001 | Maize | plastid | 51.72 | 8.43 |
| PGSC0003DMT400038459 | Potato | plastid | 55.17 | 8.4 |
| KRH24328 | Soybean | plastid | 53.45 | 8.36 |
| PGSC0003DMT400015782 | Potato | plastid | 53.45 | 8.31 |
| TraesCS4B01G272000.1 | Wheat | mitochondrion, plastid | 51.72 | 8.24 |
| Solyc01g111620.2.1 | Tomato | plastid | 53.45 | 8.22 |
| TraesCS4A01G033400.1 | Wheat | mitochondrion | 51.72 | 8.22 |
| TraesCS4D01G271200.1 | Wheat | plastid | 51.72 | 8.17 |
| VIT_03s0038g02470.t01 | Wine grape | plastid | 53.45 | 8.12 |
| Os06t0116400-01 | Rice | mitochondrion, plastid | 50.0 | 7.9 |
| EER89091 | Sorghum | mitochondrion | 50.0 | 7.69 |
| TraesCS4A01G435600.1 | Wheat | plastid | 50.0 | 7.47 |
| TraesCS7D01G044600.1 | Wheat | plastid | 50.0 | 7.44 |
| TraesCS7A01G049500.1 | Wheat | plastid | 50.0 | 7.4 |
| HORVU4Hr1G072520.2 | Barley | plastid | 51.72 | 6.62 |
| CDY17509 | Canola | extracellular | 8.62 | 6.17 |
| GSMUA_AchrUn_... | Banana | plastid | 15.52 | 2.92 |
| CDY17508 | Canola | extracellular | 8.62 | 2.13 |
Protein Annotations
| EnsemblPlants:CDX76312 | EnsemblPlantsGene:GSBRNA2T00126682001 | PANTHER:PTHR33876 | PANTHER:PTHR33876:SF2 | ProteinID:CDX76312 | ProteinID:CDX76312.1 |
| UniParc:UPI0004EDB69C | MapMan:35.2 | : | : | : | : |
Description
BnaA08g10880D
Coordinates
chrLK031807:+:291520..291973
Molecular Weight (calculated)
6339.9 Da
IEP (calculated)
12.253
GRAVY (calculated)
-0.148
Length
58 amino acids
Sequence
(BLAST)
(BLAST)
1: MTKVIVGTRN RHGSNRERGL DASSKKKKIG FATFATGVVH GLQPDALMIR LLGLVVRH
001: MERLLQPSSS SSSISPSKFP SRTSPFLPRL RSSGLSFVST HRPESRRVSS ISCNSSQIPS LYTPIGSNTT NNSFNGSPKS DESKPNPGFL TRIATSASEQ
101: RKTLSTGTVI LISAVAVLLL NPLLAPPAFA SFQTAAKSGW LTSAWTGFLA GCLHTLSGPD HLAALAPLSI GRSKMESAAV GALWGCGHDA GQVIFGLLFL
201: LLKDRLHIEV LQTWGTRIVG LTLVIIGAMG IKEASEIPEP CVALETDISM VSTEKEALPL PKKKKIGFAT FATGVVHGLQ PDALMIVLPA LALPSREALK
301: EKVPRITEKL TWVSSLVAIG LGLGIVISPF FGFSLY
101: RKTLSTGTVI LISAVAVLLL NPLLAPPAFA SFQTAAKSGW LTSAWTGFLA GCLHTLSGPD HLAALAPLSI GRSKMESAAV GALWGCGHDA GQVIFGLLFL
201: LLKDRLHIEV LQTWGTRIVG LTLVIIGAMG IKEASEIPEP CVALETDISM VSTEKEALPL PKKKKIGFAT FATGVVHGLQ PDALMIVLPA LALPSREALK
301: EKVPRITEKL TWVSSLVAIG LGLGIVISPF FGFSLY
Arabidopsis Description
High-affinity nickel-transport family protein [Source:UniProtKB/TrEMBL;Acc:F4JM82]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.