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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 1
  • golgi 1
  • mitochondrion 4
  • peroxisome 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:golgi, mitochondrion, peroxisome, plasma membrane, plastid
BaCelLo:plastid
MultiLoc:golgi
Plant-mPloc:mitochondrion, peroxisome, plasma membrane
PProwler:mitochondrion
WoLF PSORT:mitochondrion
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX76312 Canola cytosol 63.33 98.28
GSMUA_Achr3P00650_001 Banana mitochondrion 46.67 16.67
Bra011583.1-P Field mustard plastid 60.0 15.17
KRH39780 Soybean plastid 53.33 14.55
Bra037287.1-P Field mustard plastid 57.78 14.21
KRH51392 Soybean plastid 57.78 14.02
EER92833 Sorghum plastid 55.56 13.85
Os03t0156700-01 Rice mitochondrion 54.44 13.76
KRH24328 Soybean plastid 56.67 13.75
Zm00001d027721_P001 Maize plastid 53.33 13.48
KRH60695 Soybean plastid 56.67 13.46
Solyc08g005980.2.1 Tomato plastid 56.67 13.32
PGSC0003DMT400038459 Potato plastid 55.56 13.12
VIT_03s0038g02470.t01 Wine grape plastid 55.56 13.09
TraesCS4B01G272000.1 Wheat mitochondrion, plastid 52.22 12.91
TraesCS4A01G033400.1 Wheat mitochondrion 52.22 12.88
PGSC0003DMT400015782 Potato plastid 53.33 12.87
TraesCS4D01G271200.1 Wheat plastid 52.22 12.81
Os06t0116400-01 Rice mitochondrion, plastid 52.22 12.81
Solyc01g111620.2.1 Tomato plastid 53.33 12.73
GSMUA_Achr1P07500_001 Banana plastid 48.89 12.54
EER89091 Sorghum mitochondrion 52.22 12.47
TraesCS4A01G435600.1 Wheat plastid 48.89 11.34
TraesCS7D01G044600.1 Wheat plastid 48.89 11.28
TraesCS7A01G049500.1 Wheat plastid 48.89 11.22
HORVU4Hr1G072520.2 Barley plastid 52.22 10.38
GSMUA_AchrUn_... Banana plastid 14.44 4.22
Protein Annotations
EnsemblPlants:Bra034673.1EnsemblPlants:Bra034673.1-PEnsemblPlantsGene:Bra034673PANTHER:PTHR33876PANTHER:PTHR33876:SF2UniParc:UPI00025461B8
UniProt:M4F0S8MapMan:35.2::::
Description
AT4G35080 (E=5e-018) | high-affinity nickel-transport family protein
Coordinates
chrA08:-:12151769..12152221
Molecular Weight (calculated)
9994.4 Da
IEP (calculated)
12.520
GRAVY (calculated)
0.139
Length
90 amino acids
Sequence
(BLAST)
1: MTKVIVGTRN RHGSNRERGL DASSKKKKIG FATFATGVVH GLQPDALMIV LPALALPSRL AGSAFLTSFW LIRWWQWGVT QRLLGLVVRH
Best Arabidopsis Sequence Match ( AT4G35080.3 )
(BLAST)
001: MERLLQPSSS SSSISPSKFP SRTSPFLPRL RSSGLSFVST HRPESRRVSS ISCNSSQIPS LYTPIGSNTT NNSFNGSPKS DESKPNPGFL TRIATSASEQ
101: RKETYEKFVY SLLEKKIPRI TKSSNFTLST GTVILISAVA VLLLNPLLAP PAFASFQTAA KSGWLTSAWT GFLAGCLHTL SGPDHLAALA PLSIGRSKME
201: SAAVGALWGC GHDAGQVIFG LLFLLLKDRL HIEVLQTWGT RIVGLTLVII GAMGIKEASE IPEPCVALET DISMVSTEKE ALPLPKKKKI GFATFATGVV
301: HGLQPDALMI VLPALALPSR LAGSAFLIMF LVGTVIAMGS YTAFIGSCSE ALKEKVPRIT EKLTWVSSLV AIGLGLGIVI SPFFGFSLY
Arabidopsis Description
High-affinity nickel-transport family protein [Source:UniProtKB/TrEMBL;Acc:F4JM82]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.