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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 6
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:mitochondrion, plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:plastid
Predotar:plastid
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:plastid
YLoc:plastid
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS2A01G302400.1
TraesCS2A01G368500.1
TraesCS2B01G318300.2
TraesCS2B01G385700.2
TraesCS2D01G301100.1
TraesCS2D01G365300.2
TraesCS4A01G354500.1
TraesCS5B01G517900.3
TraesCS5D01G517600.1
TraesCS6A01G237600.1
TraesCS6B01G266100.1
TraesCS6D01G220300.1
TraesCS7A01G300700.1
TraesCS7D01G296400.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G16800.1 TraesCS2A01G302400.1 AT2G23420.1 21798944
AT2G16800.1 TraesCS2B01G318300.2 AT2G23420.1 21798944
AT2G16800.1 TraesCS2D01G301100.1 AT2G23420.1 21798944
AT2G16800.1 TraesCS4A01G354500.1 AT2G23420.1 21798944
AT2G16800.1 TraesCS5B01G517900.3 AT2G23420.1 21798944
AT2G16800.1 TraesCS5D01G517600.1 AT2G23420.1 21798944
AT2G16800.1 TraesCS2A01G368500.1 AT3G60600.1 21798944
AT2G16800.1 TraesCS2B01G385700.2 AT3G60600.1 21798944
AT2G16800.1 TraesCS2D01G365300.2 AT3G60600.1 21798944
AT2G16800.1 TraesCS6A01G237600.1 AT3G60600.1 21798944
AT2G16800.1 TraesCS6B01G266100.1 AT3G60600.1 21798944
AT2G16800.1 TraesCS6D01G220300.1 AT3G60600.1 21798944
AT2G16800.1 TraesCS7A01G300700.1 AT3G60600.1 21798944
AT2G16800.1 TraesCS7D01G296400.1 AT3G60600.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7D01G044600.1 Wheat plastid 88.92 88.46
TraesCS7A01G049500.1 Wheat plastid 85.57 84.69
CDY17509 Canola extracellular 13.4 64.2
GSMUA_Achr3P00650_001 Banana mitochondrion 40.72 62.7
Os06t0116400-01 Rice mitochondrion, plastid 59.02 62.4
EER89091 Sorghum mitochondrion 58.51 60.21
KRH39780 Soybean plastid 47.94 56.36
Bra037287.1-P Field mustard plastid 50.26 53.28
CDY47481 Canola plastid 50.0 53.01
Bra011583.1-P Field mustard plastid 48.45 52.81
CDY26789 Canola plastid 49.23 51.76
PGSC0003DMT400015782 Potato plastid 49.74 51.74
CDX69110 Canola plastid 48.2 51.66
GSMUA_Achr1P07500_001 Banana plastid 46.65 51.57
KRH24328 Soybean plastid 49.23 51.48
KRH51392 Soybean plastid 49.23 51.48
Solyc01g111620.2.1 Tomato plastid 50.0 51.46
AT2G16800.1 Thale cress plastid 49.23 51.34
VIT_18s0001g14840.t01 Wine grape plastid 50.26 50.91
TraesCS4A01G033400.1 Wheat mitochondrion 47.68 50.68
VIT_03s0038g02470.t01 Wine grape plastid 49.74 50.52
KRH60695 Soybean plastid 48.97 50.13
CDX76312 Canola cytosol 7.47 50.0
CDY52650 Canola plastid 48.2 49.34
Solyc08g005980.2.1 Tomato plastid 48.45 49.09
Bra034673.1-P Field mustard mitochondrion 11.34 48.89
PGSC0003DMT400038459 Potato plastid 47.94 48.82
AT4G35080.3 Thale cress plastid 48.71 48.59
GSMUA_AchrUn_... Banana plastid 36.34 45.78
CDY17508 Canola extracellular 18.04 29.79
Protein Annotations
EnsemblPlants:TraesCS4A01G435600.1EnsemblPlantsGene:TraesCS4A01G435600PANTHER:PTHR33876PANTHER:PTHR33876:SF2PFAM:PF13386SEG:seg
TMHMM:TMhelixMapMan:24.2.6.3::::
Description
No Description!
Coordinates
chr4A:+:705632681..705633981
Molecular Weight (calculated)
39496.3 Da
IEP (calculated)
9.367
GRAVY (calculated)
0.491
Length
388 amino acids
Sequence
(BLAST)
001: MDRLISSPLH LTRAPASSSA ASRPRAGGHH HLLPAAAAPR SFAPLHGLGL HPLAPLLPRP PLPLLAAASA SSRADAVNPA PPEQDDEAAV QAPPNGFTRF
101: FQKVASAAAV ALVAALVVAA VGSSSMVPPA LASALHGHSH TAVVTAGRSI FKSELLGSAW TGFLAGCLHT LSGPDHLAAL APLSIGRSPV ESAAVGALWG
201: CGHDAGQVMF GLLFLGLKDR LHIEVLRTWG TRVVGLTLLV IGAIGIREAT QATPCVAAAL EGGAHQHGGN NSNALEKALL GAGGKKKEIS FATFATGIVH
301: GLQPDALMII LPALAMPSRA AGAAFLGMFL VGTVLSMASY TVLIGTCTEA LKERVPRITE KLTWAASLVA ISMGVAIIVS ESFGVSLY
Best Arabidopsis Sequence Match ( AT2G16800.1 )
(BLAST)
001: MDRLLQPPSS HSIAPSKFQS RPSPLLLHRL HSTNLSTFPS SRRLESRRIS SISCFFRQNP SPDTSPGLNQ SSNFLIASSQ TDASKPNPGF IQRIVSSFEQ
101: RKTISAGMVI LVSAIAALLL NPILVPPAFA SFQTATNSGG AAVVGGKLLR TEVLTSAWTG FFAGCLHTLS GPDHLAALAP LSIGRTRMES AAVGALWGCG
201: HDAGQLIFGL LFLLLKDRLH IEVIRTWGTR VVGLTLLVIG AMGIKEASEM PEPCVVTLEN GETDEKSLKK KKIGFATFAT GIVHGLQPDA LMMVLPALAL
301: PSRIAGASFL IMFLIGTVIA MGSYTVFIGS CSEALKEKVP RITEKLTWAS SLVAIGLGLA IIVSQFFGFS LY
Arabidopsis Description
Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q9SLD9]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.