Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- peroxisome 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G354500.1 | Wheat | peroxisome | 99.13 | 99.13 |
| TraesCS5D01G517600.1 | Wheat | peroxisome | 99.13 | 99.13 |
| Os03t0837300-02 | Rice | plasma membrane | 85.62 | 88.21 |
| Zm00001d034777_P005 | Maize | cytosol | 84.23 | 87.25 |
| OQU90665 | Sorghum | peroxisome | 84.4 | 86.04 |
| GSMUA_Achr11P... | Banana | cytosol | 75.04 | 83.59 |
| KRH04597 | Soybean | cytosol | 59.1 | 80.42 |
| VIT_07s0031g00460.t01 | Wine grape | cytosol | 77.12 | 79.32 |
| Solyc02g093290.2.1 | Tomato | cytosol, extracellular, nucleus | 76.43 | 79.03 |
| PGSC0003DMT400010254 | Potato | cytosol | 76.26 | 78.85 |
| KRH57934 | Soybean | cytosol, nucleus | 75.39 | 78.1 |
| CDY63965 | Canola | cytosol | 69.67 | 77.31 |
| TraesCS2B01G318300.2 | Wheat | cytosol, peroxisome, plastid | 75.74 | 77.21 |
| Bra017808.1-P | Field mustard | cytosol | 70.02 | 76.81 |
| CDY46076 | Canola | cytosol | 74.0 | 76.8 |
| Bra039198.1-P | Field mustard | cytosol | 74.0 | 76.8 |
| AT2G23420.1 | Thale cress | cytosol | 74.0 | 76.66 |
| AT4G36940.1 | Thale cress | cytosol | 74.0 | 76.39 |
| CDY66512 | Canola | cytosol | 73.48 | 76.26 |
| CDY29537 | Canola | cytosol | 74.18 | 76.16 |
| Solyc03g044430.2.1 | Tomato | cytosol | 74.52 | 75.97 |
| KRH77015 | Soybean | cytosol | 71.23 | 73.66 |
| KRH63322 | Soybean | extracellular | 9.01 | 62.65 |
| KRH28456 | Soybean | extracellular | 19.41 | 59.26 |
Protein Annotations
| KEGG:00760+6.3.4.21 | Gene3D:3.20.140.10 | Gene3D:3.20.20.70 | MapMan:7.9.2.2 | InterPro:Aldolase_TIM | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004514 | GO:GO:0004516 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009435 | GO:GO:0009987 | GO:GO:0016740 | GO:GO:0019358 | InterPro:IPR013785 |
| InterPro:Nic_PRibTrfase-Fam | InterPro:Nic_PRibTrfase_pncB | InterPro:Nicotinate_pribotase_like_C | PIRSF:PIRSF000484 | PANTHER:PTHR11098 | PANTHER:PTHR11098:SF17 |
| SUPFAM:SSF51690 | SUPFAM:SSF54675 | TIGRFAMs:TIGR01513 | EnsemblPlantsGene:TraesCS5B01G517900 | EnsemblPlants:TraesCS5B01G517900.3 | TIGR:cd01570 |
Description
No Description!
Coordinates
chr5B:+:681077635..681084439
Molecular Weight (calculated)
63846.5 Da
IEP (calculated)
6.205
GRAVY (calculated)
-0.062
Length
577 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAALANGD VRAGGGGAVP RPTNPMVTPL LTDLYQFSMA YAYWKAGKHL DRAVFDLYFR KSPFAGEFTV FGGLEECIRF IANFKFKEEE INFLRTALPT
101: CEDGFFEYLS SIDCSDVEVY AIPEGSAVFP KVPLMIIEGP VAVVQLLETP FLSLVNYASL VTTNAARHRL VAGKPKNLLE FGLRRAQGPD GGISASRYSY
201: MGGFDATSNV AAGRLFGIPI RGTHSHAFVS SFLGLDEIID KALSSSDGSN KCENFVSLVQ NWLVKIQDAS SLRGSFGETN QSELAAFTSY ALAFPNSFLA
301: LVDTYDVMRS GVPNFCAVAL ALNDMGYKAV GIRLDSGDLA YLSIETRKFF CAIEKEFGVV GFGKTNITAS NDLNEETIDA LNKQGHEVDS FGIGTYLVTC
401: YAQAALGCVF KLVEINKQPR IKLSEDVTKV SIPCKKRCYR LYGKEGYPLV DIMTGQDEPS PKVGERILCR HPFIESKRAH VVPQHVEELL KCYWPGNSFE
501: KDIDANLYPL VNAVAVQREE LPSLNENRSR CMRQLERMRP DHLRKLNPTP YKVSVSAQLY DFIHFLWLNE APVGELQ
101: CEDGFFEYLS SIDCSDVEVY AIPEGSAVFP KVPLMIIEGP VAVVQLLETP FLSLVNYASL VTTNAARHRL VAGKPKNLLE FGLRRAQGPD GGISASRYSY
201: MGGFDATSNV AAGRLFGIPI RGTHSHAFVS SFLGLDEIID KALSSSDGSN KCENFVSLVQ NWLVKIQDAS SLRGSFGETN QSELAAFTSY ALAFPNSFLA
301: LVDTYDVMRS GVPNFCAVAL ALNDMGYKAV GIRLDSGDLA YLSIETRKFF CAIEKEFGVV GFGKTNITAS NDLNEETIDA LNKQGHEVDS FGIGTYLVTC
401: YAQAALGCVF KLVEINKQPR IKLSEDVTKV SIPCKKRCYR LYGKEGYPLV DIMTGQDEPS PKVGERILCR HPFIESKRAH VVPQHVEELL KCYWPGNSFE
501: KDIDANLYPL VNAVAVQREE LPSLNENRSR CMRQLERMRP DHLRKLNPTP YKVSVSAQLY DFIHFLWLNE APVGELQ
001: MEPKENGSEL GQKIIDGPTN PMVTPLLNDL YQFTMAYAYW KAGKHNERSV FDLYFRKNPF GGEYTVFAGL EECVKFLANF KLTDEEIDFV QECLPGSEEA
101: FCDYLRGLDC SDVEVYAIPE GSVVFPKVPL MRVEGPVGVV QLLETPFLNL VNFASLVATN AARHRFVAGK SKSLLEFGAR RAQGPDGAIS ASKYCYLGGF
201: DATSNVAAGK LFGIPLRGTH SHAYVSSFMS TDEIVDKVLR SADGKTTCED FVSHVQTWLK KIQYSPSLSG IFSETNQSEL AAFTSYALAF PKTFLALVDT
301: YDVMKSGIPN FCAVALALND FGYKALGIRL DSGDLAYLSR EARNFFCTVE RELKVPGFGK MVVTASNDLN EETIDALNKQ GHEVDAFGIG TYLVTCYSQA
401: ALGCVFKLVE INNQPRIKLS EDVTKVSIPC KKRSYRLYGK EGYPLVDIMT GENEPPPKVG ERLLCRHPFN ESKRAYVVPQ RVEELLKCYW RGSADEAREV
501: LPPLKEIRDR CIKQLENMRP DHMRRLNPTP YKVSVSAKLY DFIHFLWLNE APVGELQ
101: FCDYLRGLDC SDVEVYAIPE GSVVFPKVPL MRVEGPVGVV QLLETPFLNL VNFASLVATN AARHRFVAGK SKSLLEFGAR RAQGPDGAIS ASKYCYLGGF
201: DATSNVAAGK LFGIPLRGTH SHAYVSSFMS TDEIVDKVLR SADGKTTCED FVSHVQTWLK KIQYSPSLSG IFSETNQSEL AAFTSYALAF PKTFLALVDT
301: YDVMKSGIPN FCAVALALND FGYKALGIRL DSGDLAYLSR EARNFFCTVE RELKVPGFGK MVVTASNDLN EETIDALNKQ GHEVDAFGIG TYLVTCYSQA
401: ALGCVFKLVE INNQPRIKLS EDVTKVSIPC KKRSYRLYGK EGYPLVDIMT GENEPPPKVG ERLLCRHPFN ESKRAYVVPQ RVEELLKCYW RGSADEAREV
501: LPPLKEIRDR CIKQLENMRP DHMRRLNPTP YKVSVSAKLY DFIHFLWLNE APVGELQ
Arabidopsis Description
NAPRT2Nicotinate phosphoribosyltransferase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q84WV8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.