Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G283400.1 | Wheat | cytosol | 97.84 | 94.88 |
| TraesCS4A01G020200.1 | Wheat | cytosol | 97.36 | 94.42 |
| TraesCS4B01G283500.1 | Wheat | cytosol | 97.36 | 94.2 |
| HORVU4Hr1G074720.7 | Barley | plasma membrane | 96.16 | 91.34 |
| TraesCS3D01G540000.1 | Wheat | cytosol | 89.69 | 87.59 |
| Os03t0167800-02 | Rice | cytosol | 83.45 | 79.45 |
| EER95442 | Sorghum | mitochondrion | 81.53 | 77.63 |
| Zm00001d027827_P001 | Maize | cytosol, mitochondrion, nucleus | 80.34 | 76.31 |
| TraesCS1D01G136700.1 | Wheat | nucleus | 81.53 | 72.81 |
| GSMUA_Achr7P27010_001 | Banana | cytosol | 69.3 | 69.47 |
| GSMUA_Achr3P29560_001 | Banana | cytosol | 67.63 | 68.61 |
| PGSC0003DMT400081852 | Potato | cytosol | 69.78 | 66.59 |
| PGSC0003DMT400034149 | Potato | cytosol | 69.78 | 66.59 |
| Solyc01g005970.2.1 | Tomato | cytosol | 69.54 | 66.36 |
| VIT_06s0004g00860.t01 | Wine grape | cytosol | 69.54 | 66.36 |
| Solyc01g022740.2.1 | Tomato | cytosol | 69.3 | 66.13 |
| AT1G55270.1 | Thale cress | mitochondrion | 67.87 | 65.21 |
| KRH42810 | Soybean | cytosol | 68.11 | 64.99 |
| KRH58897 | Soybean | cytosol | 68.11 | 64.99 |
| CDY08233 | Canola | mitochondrion | 67.63 | 64.83 |
| Bra011908.1-P | Field mustard | mitochondrion | 67.15 | 64.37 |
| CDY26117 | Canola | cytosol | 67.15 | 64.37 |
| CDY10574 | Canola | cytosol | 66.43 | 63.68 |
| CDY02451 | Canola | cytosol | 66.43 | 63.68 |
| Bra030872.1-P | Field mustard | cytosol | 66.19 | 63.45 |
| CDY33062 | Canola | mitochondrion, plastid | 63.79 | 61.15 |
| CDY24045 | Canola | mitochondrion | 63.55 | 60.92 |
| Bra037989.1-P | Field mustard | cytosol, plastid | 62.83 | 60.23 |
| KRH11716 | Soybean | cytosol, golgi, plastid | 50.36 | 56.45 |
| KRH36711 | Soybean | cytosol | 49.16 | 50.87 |
| TraesCS6D01G167900.1 | Wheat | plastid | 49.88 | 49.17 |
| GSMUA_Achr4P03630_001 | Banana | plasma membrane | 61.39 | 30.15 |
| TraesCS4D01G286700.1 | Wheat | cytosol | 19.9 | 25.15 |
| TraesCS3D01G439000.1 | Wheat | cytosol | 22.78 | 24.74 |
| TraesCS2D01G499800.1 | Wheat | mitochondrion | 23.5 | 24.2 |
| TraesCS2D01G279700.1 | Wheat | mitochondrion | 21.58 | 23.5 |
| TraesCS6D01G043400.1 | Wheat | cytosol | 21.34 | 23.3 |
| TraesCS7D01G016400.1 | Wheat | cytosol, plastid | 24.94 | 22.81 |
| TraesCS6D01G195800.1 | Wheat | cytosol | 18.94 | 22.38 |
| TraesCS7D01G483900.1 | Wheat | cytosol | 19.18 | 20.89 |
| TraesCS7D01G007100.1 | Wheat | cytosol | 18.23 | 20.43 |
| TraesCS2D01G463000.1 | Wheat | cytosol | 21.82 | 20.36 |
| TraesCS7D01G005100.1 | Wheat | cytosol | 10.31 | 20.0 |
| TraesCS6D01G285100.1 | Wheat | cytosol, nucleus, plastid | 20.14 | 19.76 |
Protein Annotations
| EnsemblPlants:TraesCS4D01G282200.1 | EnsemblPlantsGene:TraesCS4D01G282200 | Gene3D:2.120.10.80 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | PANTHER:PTHR24412 | PANTHER:PTHR24412:SF234 | PFAM:PF01344 |
| SEG:seg | SMART:SM00612 | SUPFAM:SSF117281 | MapMan:9.2.1.1.3 | : | : |
Description
No Description!
Coordinates
chr4D:+:453307201..453321181
Molecular Weight (calculated)
47823.0 Da
IEP (calculated)
10.077
GRAVY (calculated)
-0.292
Length
417 amino acids
Sequence
(BLAST)
(BLAST)
001: MVEYVSCYCR VDGGLKTVVN ARKFVPGARL CMQSDVKPNK RKSRTSRKER CRTQAPLLPG LPDDLAISCL MRVPRVEHPN LRLVGKRWSR LLSGNYYYSL
101: RKKFGMAEEW VYVFKRDRDQ KISWHAFDPV HQLWKSLPPV PPEYSEAVGF GCAVLSGCYL YLFGGKNSVR GSMRRVVFYN TRTNKWHRAP DMLRKRHFFG
201: SCVINNCLYV AGGECEGIQR TLRSAEVYNP NRNRWSCITE MSIGMVPFIG VVYDGKWFLK GFDSHRQIVS EVYLPTSNMW STTGNELVAG LRNPSISFNG
301: RLYSVDCRDA CKLRVYDGDK GLWTRFIDSR RHLGSSRSFE AVALVSLDGK ICVIRNNMGI TLVDVCDPTT VIEIDSARMW ETFARKGQHR SFMANLWSTI
401: AGRHLKTHII HCQVLQV
101: RKKFGMAEEW VYVFKRDRDQ KISWHAFDPV HQLWKSLPPV PPEYSEAVGF GCAVLSGCYL YLFGGKNSVR GSMRRVVFYN TRTNKWHRAP DMLRKRHFFG
201: SCVINNCLYV AGGECEGIQR TLRSAEVYNP NRNRWSCITE MSIGMVPFIG VVYDGKWFLK GFDSHRQIVS EVYLPTSNMW STTGNELVAG LRNPSISFNG
301: RLYSVDCRDA CKLRVYDGDK GLWTRFIDSR RHLGSSRSFE AVALVSLDGK ICVIRNNMGI TLVDVCDPTT VIEIDSARMW ETFARKGQHR SFMANLWSTI
401: AGRHLKTHII HCQVLQV
001: MDLSSQRQSP NGSRGFRLQA PLVDSVSCYC RVDSGLKTVV EARKFVPGSK LCIQPDINPN AHRRKNSKRE RTRIQPPLLP GLPDDLAVAC LIRVPRAEHR
101: KLRLVCKRWY RLASGNFFYS QRKLLGMSEE WVYVFKRDRD GKISWNTFDP ISQLWQPLPP VPREYSEAVG FGCAVLSGCH LYLFGGKDPL RGSMRRVIFY
201: NARTNKWHRA PDMLRKRHFF GCCVINNCLY VAGGECEGIQ RTLRSAEVYD PNKNRWSFIA DMSTAMVPLI GVVYDKKWFL KGLGSHQLVM SEAYDPEVNS
301: WSPVSDGMVA GWRNPCTSLN GRLYGLDCRD GCKLRVFDES TDSWNKFMDS KAHLGNSKSL EAAALVPLHN KLCIIRNNMS MSLVDVSNPD KNNPRLWENI
401: AVKGQSKSIL SNIWSSIAGR ALKSHIVHCQ VLQA
101: KLRLVCKRWY RLASGNFFYS QRKLLGMSEE WVYVFKRDRD GKISWNTFDP ISQLWQPLPP VPREYSEAVG FGCAVLSGCH LYLFGGKDPL RGSMRRVIFY
201: NARTNKWHRA PDMLRKRHFF GCCVINNCLY VAGGECEGIQ RTLRSAEVYD PNKNRWSFIA DMSTAMVPLI GVVYDKKWFL KGLGSHQLVM SEAYDPEVNS
301: WSPVSDGMVA GWRNPCTSLN GRLYGLDCRD GCKLRVFDES TDSWNKFMDS KAHLGNSKSL EAAALVPLHN KLCIIRNNMS MSLVDVSNPD KNNPRLWENI
401: AVKGQSKSIL SNIWSSIAGR ALKSHIVHCQ VLQA
Arabidopsis Description
F-box/kelch-repeat protein At1g55270 [Source:UniProtKB/Swiss-Prot;Acc:Q93W93]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.