Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 3
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra037989.1-P | Field mustard | cytosol, plastid | 97.01 | 97.01 |
| CDY33062 | Canola | mitochondrion, plastid | 93.33 | 93.33 |
| CDY02451 | Canola | cytosol | 88.74 | 88.74 |
| CDY10574 | Canola | cytosol | 88.74 | 88.74 |
| CDY26117 | Canola | cytosol | 88.74 | 88.74 |
| CDY08233 | Canola | mitochondrion | 88.28 | 88.28 |
| AT1G55270.1 | Thale cress | mitochondrion | 87.59 | 87.79 |
| VIT_06s0004g00860.t01 | Wine grape | cytosol | 74.02 | 73.68 |
| Solyc01g005970.2.1 | Tomato | cytosol | 73.33 | 73.0 |
| PGSC0003DMT400081852 | Potato | cytosol | 72.64 | 72.31 |
| KRH42810 | Soybean | cytosol | 71.03 | 70.71 |
| KRH58897 | Soybean | cytosol | 71.03 | 70.71 |
| PGSC0003DMT400034149 | Potato | cytosol | 70.8 | 70.48 |
| Solyc01g022740.2.1 | Tomato | cytosol | 70.11 | 69.79 |
| GSMUA_Achr7P27010_001 | Banana | cytosol | 66.67 | 69.71 |
| GSMUA_Achr3P29560_001 | Banana | cytosol | 65.52 | 69.34 |
| Os10t0409900-01 | Rice | plastid | 67.82 | 66.74 |
| Zm00001d032991_P001 | Maize | cytosol | 66.9 | 66.59 |
| EER91632 | Sorghum | plastid | 66.21 | 65.9 |
| Os03t0167800-02 | Rice | cytosol | 66.21 | 65.75 |
| TraesCS1B01G154600.1 | Wheat | plastid | 65.75 | 65.3 |
| TraesCS4D01G282200.1 | Wheat | cytosol | 60.92 | 63.55 |
| TraesCS4A01G020200.1 | Wheat | cytosol | 62.76 | 63.49 |
| TraesCS3B01G611700.1 | Wheat | cytosol | 62.07 | 63.23 |
| TraesCS3D01G540000.1 | Wheat | cytosol | 62.07 | 63.23 |
| TraesCS4B01G283400.1 | Wheat | cytosol | 61.84 | 62.56 |
| HORVU4Hr1G074720.7 | Barley | plasma membrane | 62.53 | 61.96 |
| TraesCS3A01G534600.1 | Wheat | cytosol | 61.38 | 61.95 |
| TraesCS4B01G283500.1 | Wheat | cytosol | 60.92 | 61.48 |
| TraesCS1D01G136700.1 | Wheat | nucleus | 65.29 | 60.81 |
| EER95442 | Sorghum | mitochondrion | 61.15 | 60.73 |
| KRH11716 | Soybean | cytosol, golgi, plastid | 51.49 | 60.22 |
| Zm00001d027827_P001 | Maize | cytosol, mitochondrion, nucleus | 60.69 | 60.14 |
| HORVU1Hr1G035200.1 | Barley | plasma membrane | 65.29 | 59.79 |
| HORVU3Hr1G116690.2 | Barley | mitochondrion | 62.53 | 55.85 |
| KRH36711 | Soybean | cytosol | 50.11 | 54.09 |
| GSMUA_Achr4P03630_001 | Banana | plasma membrane | 60.0 | 30.74 |
| CDY01301 | Canola | cytosol | 10.8 | 29.94 |
| CDX99882 | Canola | mitochondrion, plastid | 24.14 | 26.38 |
| CDY26295 | Canola | mitochondrion, plastid | 23.91 | 26.13 |
| CDY12647 | Canola | cytosol | 21.61 | 25.97 |
| CDX96091 | Canola | cytosol | 21.61 | 25.2 |
| CDY01812 | Canola | cytosol | 21.61 | 25.2 |
| CDX90085 | Canola | plastid | 19.31 | 24.35 |
| CDY11811 | Canola | plastid | 19.31 | 24.35 |
| CDY03923 | Canola | cytosol | 18.85 | 24.26 |
| CDY58259 | Canola | cytosol | 19.31 | 24.21 |
| CDY15708 | Canola | cytosol | 19.08 | 24.2 |
| CDY66857 | Canola | cytosol | 19.77 | 24.16 |
| CDX99248 | Canola | cytosol | 19.31 | 24.14 |
| CDY52247 | Canola | cytosol | 17.7 | 24.06 |
| CDY70128 | Canola | cytosol | 18.62 | 24.04 |
| CDY18573 | Canola | cytosol | 19.08 | 23.85 |
| CDY04697 | Canola | cytosol | 12.18 | 23.77 |
| CDY64382 | Canola | plastid | 18.62 | 23.68 |
| CDY30645 | Canola | nucleus | 11.95 | 23.32 |
| CDX82306 | Canola | cytosol | 18.39 | 23.12 |
| CDY22982 | Canola | cytosol | 18.39 | 23.12 |
| CDY64883 | Canola | golgi, plastid | 21.84 | 23.11 |
| CDY17172 | Canola | cytosol | 7.59 | 22.92 |
| CDY36145 | Canola | cytosol | 18.39 | 22.86 |
| CDX76807 | Canola | cytosol | 19.31 | 22.76 |
| CDY34765 | Canola | cytosol | 19.31 | 22.58 |
| CDY58793 | Canola | cytosol | 18.62 | 22.56 |
| CDY35074 | Canola | cytosol | 10.8 | 22.49 |
| CDY70379 | Canola | cytosol | 8.05 | 22.15 |
| CDY51562 | Canola | cytosol | 18.16 | 22.01 |
| CDX81755 | Canola | cytosol | 19.31 | 21.54 |
| CDX82682 | Canola | cytosol | 15.4 | 21.41 |
| CDY31534 | Canola | cytosol | 18.39 | 21.33 |
| CDY54825 | Canola | cytosol | 9.43 | 21.24 |
| CDX80156 | Canola | cytosol | 18.39 | 21.11 |
| CDY15707 | Canola | cytosol, plastid | 17.01 | 20.96 |
| CDX96822 | Canola | extracellular, vacuole | 20.46 | 20.6 |
| CDY33754 | Canola | nucleus | 11.72 | 20.4 |
| CDY33348 | Canola | cytosol | 8.28 | 20.0 |
| CDY60836 | Canola | cytosol | 17.47 | 20.0 |
| CDY01300 | Canola | cytosol | 10.11 | 19.64 |
| CDY17425 | Canola | cytosol | 17.93 | 19.45 |
| CDY66938 | Canola | cytosol, mitochondrion | 7.82 | 19.32 |
| CDY28493 | Canola | cytosol | 18.16 | 19.22 |
| CDY34175 | Canola | cytosol | 18.16 | 19.22 |
| CDY62015 | Canola | nucleus | 18.16 | 19.04 |
| CDY46430 | Canola | cytosol | 18.62 | 19.01 |
| CDX81631 | Canola | nucleus | 17.7 | 18.83 |
| CDY52764 | Canola | cytosol | 18.39 | 18.82 |
| CDY13683 | Canola | cytosol | 18.62 | 18.71 |
| CDY52395 | Canola | cytosol | 18.62 | 18.71 |
| CDY16205 | Canola | nucleus | 18.16 | 18.68 |
| CDY49094 | Canola | nucleus | 18.16 | 18.63 |
| CDY65956 | Canola | cytosol | 8.05 | 18.62 |
| CDY03028 | Canola | cytosol | 19.08 | 18.49 |
| CDX90239 | Canola | cytosol | 16.78 | 18.39 |
| CDY49979 | Canola | cytosol | 17.24 | 18.38 |
| CDY45190 | Canola | nucleus | 19.08 | 18.32 |
| CDY53460 | Canola | cytosol | 7.36 | 18.18 |
| CDY09349 | Canola | nucleus | 18.39 | 18.02 |
| CDX96551 | Canola | cytosol | 16.78 | 17.98 |
| CDY00415 | Canola | mitochondrion | 8.74 | 17.76 |
| CDX68177 | Canola | cytosol | 17.01 | 17.75 |
| CDY36146 | Canola | cytosol | 17.01 | 17.75 |
| CDY62176 | Canola | nucleus | 18.16 | 17.67 |
| CDY64780 | Canola | cytosol | 17.47 | 17.51 |
| CDY63005 | Canola | cytosol | 16.78 | 17.51 |
| CDY35075 | Canola | cytosol | 7.36 | 17.39 |
| CDX85842 | Canola | cytosol | 17.01 | 17.33 |
| CDY69929 | Canola | cytosol | 16.55 | 17.27 |
| CDX73096 | Canola | cytosol | 15.86 | 17.21 |
| CDY03921 | Canola | cytosol, extracellular, plasma membrane | 13.79 | 17.0 |
| CDY12345 | Canola | cytosol | 17.24 | 16.48 |
| CDY49977 | Canola | cytosol | 16.09 | 14.89 |
| CDY33755 | Canola | cytosol | 3.45 | 12.2 |
Protein Annotations
| Gene3D:2.120.10.80 | MapMan:9.2.1.1.3 | UniProt:A0A078GC57 | EnsemblPlants:CDY24045 | ProteinID:CDY24045 | ProteinID:CDY24045.1 |
| InterPro:F-box-like_dom_sf | InterPro:F-box_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00024575001 |
| InterPro:IPR001810 | InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | PFAM:PF00646 | PFAM:PF01344 |
| PANTHER:PTHR24412 | PANTHER:PTHR24412:SF234 | SMART:SM00612 | SUPFAM:SSF117281 | SUPFAM:SSF81383 | UniParc:UPI0004EE51D8 |
| SEG:seg | : | : | : | : | : |
Description
BnaA06g00430DBnaA06g00430D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GC57]
Coordinates
chrLK032153:+:30450..31899
Molecular Weight (calculated)
49081.1 Da
IEP (calculated)
9.742
GRAVY (calculated)
-0.352
Length
435 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLSSQRQSS NGSRGFRLQA PLVDSVSCYC RVDSSLRTVV EARKFVPGSK LCIQPNINPN AHRPSKNSNR ERTRIQPPLL PGLPDDLAVA CLIRVPRADH
101: RKLRLVCKSW HRLASGNFFY SERKLLGRSE EWVHVFKKDR DGKISWNAFD PVTHLPQPLP PLPREYSEAV GFGCAVLSGC RLYLFGGKDP LRGSMRRVVF
201: YNARTNKWHR GPDMLRKRHF FGCCVINNCL YVAGGECEGI QRRLRSAEVY DPNKNRWSFV ADMGASMVPL LGVVYDNKWF LKGLGSQQQV ICEAYDPEAN
301: SWSLVSDGMV TGWRDPCACL DGRLYGLDCR DGCKLRVFDK STDSWNKFMD SKVHLGNSWA FEAAALVTLN NKLCIVRNNM SMSLVDVTNP DKNSPRLWEN
401: IAVKGQSKSI ISNIWSSIAG RAVKTHIVHC QVLQA
101: RKLRLVCKSW HRLASGNFFY SERKLLGRSE EWVHVFKKDR DGKISWNAFD PVTHLPQPLP PLPREYSEAV GFGCAVLSGC RLYLFGGKDP LRGSMRRVVF
201: YNARTNKWHR GPDMLRKRHF FGCCVINNCL YVAGGECEGI QRRLRSAEVY DPNKNRWSFV ADMGASMVPL LGVVYDNKWF LKGLGSQQQV ICEAYDPEAN
301: SWSLVSDGMV TGWRDPCACL DGRLYGLDCR DGCKLRVFDK STDSWNKFMD SKVHLGNSWA FEAAALVTLN NKLCIVRNNM SMSLVDVTNP DKNSPRLWEN
401: IAVKGQSKSI ISNIWSSIAG RAVKTHIVHC QVLQA
001: MDLSSQRQSP NGSRGFRLQA PLVDSVSCYC RVDSGLKTVV EARKFVPGSK LCIQPDINPN AHRRKNSKRE RTRIQPPLLP GLPDDLAVAC LIRVPRAEHR
101: KLRLVCKRWY RLASGNFFYS QRKLLGMSEE WVYVFKRDRD GKISWNTFDP ISQLWQPLPP VPREYSEAVG FGCAVLSGCH LYLFGGKDPL RGSMRRVIFY
201: NARTNKWHRA PDMLRKRHFF GCCVINNCLY VAGGECEGIQ RTLRSAEVYD PNKNRWSFIA DMSTAMVPLI GVVYDKKWFL KGLGSHQLVM SEAYDPEVNS
301: WSPVSDGMVA GWRNPCTSLN GRLYGLDCRD GCKLRVFDES TDSWNKFMDS KAHLGNSKSL EAAALVPLHN KLCIIRNNMS MSLVDVSNPD KNNPRLWENI
401: AVKGQSKSIL SNIWSSIAGR ALKSHIVHCQ VLQA
101: KLRLVCKRWY RLASGNFFYS QRKLLGMSEE WVYVFKRDRD GKISWNTFDP ISQLWQPLPP VPREYSEAVG FGCAVLSGCH LYLFGGKDPL RGSMRRVIFY
201: NARTNKWHRA PDMLRKRHFF GCCVINNCLY VAGGECEGIQ RTLRSAEVYD PNKNRWSFIA DMSTAMVPLI GVVYDKKWFL KGLGSHQLVM SEAYDPEVNS
301: WSPVSDGMVA GWRNPCTSLN GRLYGLDCRD GCKLRVFDES TDSWNKFMDS KAHLGNSKSL EAAALVPLHN KLCIIRNNMS MSLVDVSNPD KNNPRLWENI
401: AVKGQSKSIL SNIWSSIAGR ALKSHIVHCQ VLQA
Arabidopsis Description
F-box/kelch-repeat protein At1g55270 [Source:UniProtKB/Swiss-Prot;Acc:Q93W93]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.