Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX68177 | Canola | cytosol | 97.19 | 99.52 |
| Bra003796.1-P | Field mustard | cytosol | 99.3 | 99.3 |
| CDX73096 | Canola | cytosol | 79.39 | 84.54 |
| CDX96551 | Canola | cytosol | 79.63 | 83.74 |
| AT1G74510.2 | Thale cress | cytosol | 87.82 | 83.15 |
| CDY70379 | Canola | cytosol | 27.87 | 75.32 |
| CDY33755 | Canola | cytosol | 15.93 | 55.28 |
| CDY52764 | Canola | cytosol | 51.99 | 52.24 |
| CDY46430 | Canola | cytosol | 51.99 | 52.11 |
| CDY62015 | Canola | nucleus | 50.59 | 52.05 |
| CDY60836 | Canola | cytosol | 46.14 | 51.84 |
| CDX81631 | Canola | nucleus | 49.41 | 51.59 |
| CDY16205 | Canola | nucleus | 51.05 | 51.54 |
| CDY49094 | Canola | nucleus | 50.82 | 51.18 |
| CDY62176 | Canola | nucleus | 52.69 | 50.34 |
| CDY09349 | Canola | nucleus | 52.22 | 50.23 |
| CDY17425 | Canola | cytosol | 47.07 | 50.12 |
| CDY03028 | Canola | cytosol | 51.52 | 49.0 |
| CDY45190 | Canola | nucleus | 51.76 | 48.79 |
| CDY33754 | Canola | nucleus | 26.7 | 45.6 |
| CDY31534 | Canola | cytosol | 34.43 | 39.2 |
| CDX80156 | Canola | cytosol | 34.19 | 38.52 |
| CDY66938 | Canola | cytosol, mitochondrion | 15.22 | 36.93 |
| CDY53460 | Canola | cytosol | 14.75 | 35.8 |
| CDY65956 | Canola | cytosol | 15.69 | 35.64 |
| CDX82682 | Canola | cytosol | 25.53 | 34.82 |
| CDY13683 | Canola | cytosol | 30.45 | 30.02 |
| CDY34175 | Canola | cytosol | 28.81 | 29.93 |
| CDY63005 | Canola | cytosol | 28.81 | 29.5 |
| CDY28493 | Canola | cytosol | 28.34 | 29.44 |
| CDY64780 | Canola | cytosol | 29.74 | 29.26 |
| CDY69929 | Canola | cytosol | 28.57 | 29.26 |
| CDY36146 | Canola | cytosol | 28.57 | 29.26 |
| CDY52395 | Canola | cytosol | 29.27 | 28.87 |
| CDX90239 | Canola | cytosol | 26.0 | 27.96 |
| CDY12345 | Canola | cytosol | 29.74 | 27.91 |
| CDY49979 | Canola | cytosol | 26.23 | 27.45 |
| CDY22982 | Canola | cytosol | 17.56 | 21.68 |
| CDX82306 | Canola | cytosol | 17.56 | 21.68 |
| CDX99248 | Canola | cytosol | 17.56 | 21.55 |
| CDY18573 | Canola | cytosol | 17.56 | 21.55 |
| CDY49977 | Canola | cytosol | 23.65 | 21.49 |
| CDY58259 | Canola | cytosol | 17.33 | 21.33 |
| CDY12647 | Canola | cytosol | 17.33 | 20.44 |
| CDY01301 | Canola | cytosol | 7.49 | 20.38 |
| CDX96091 | Canola | cytosol | 17.33 | 19.84 |
| CDY01812 | Canola | cytosol | 17.1 | 19.57 |
| CDY01300 | Canola | cytosol | 10.07 | 19.2 |
| CDX81755 | Canola | cytosol | 17.33 | 18.97 |
| CDY03923 | Canola | cytosol | 14.99 | 18.93 |
| CDY30645 | Canola | nucleus | 9.84 | 18.83 |
| CDY04697 | Canola | cytosol | 9.84 | 18.83 |
| CDY00415 | Canola | mitochondrion | 9.37 | 18.69 |
| CDY64382 | Canola | plastid | 14.75 | 18.42 |
| CDY54825 | Canola | cytosol | 8.2 | 18.13 |
| CDY66857 | Canola | cytosol | 14.99 | 17.98 |
| CDY51562 | Canola | cytosol | 14.99 | 17.83 |
| CDX96822 | Canola | extracellular, vacuole | 18.03 | 17.82 |
| CDY70128 | Canola | cytosol | 14.05 | 17.8 |
| CDY36145 | Canola | cytosol | 14.52 | 17.71 |
| CDX90085 | Canola | plastid | 14.29 | 17.68 |
| CDY64883 | Canola | golgi, plastid | 16.86 | 17.52 |
| CDY52247 | Canola | cytosol | 13.11 | 17.5 |
| CDY15708 | Canola | cytosol | 14.05 | 17.49 |
| CDY11811 | Canola | plastid | 14.05 | 17.39 |
| CDX76807 | Canola | cytosol | 14.99 | 17.34 |
| CDY58793 | Canola | cytosol | 14.52 | 17.27 |
| CDY33348 | Canola | cytosol | 7.26 | 17.22 |
| CDY26295 | Canola | mitochondrion, plastid | 15.93 | 17.09 |
| CDX99882 | Canola | mitochondrion, plastid | 15.93 | 17.09 |
| CDY24045 | Canola | mitochondrion | 17.33 | 17.01 |
| CDY35075 | Canola | cytosol | 7.26 | 16.85 |
| CDY10574 | Canola | cytosol | 16.86 | 16.55 |
| CDY02451 | Canola | cytosol | 16.86 | 16.55 |
| CDY26117 | Canola | cytosol | 16.86 | 16.55 |
| CDY34765 | Canola | cytosol | 14.29 | 16.4 |
| CDY08233 | Canola | mitochondrion | 16.63 | 16.32 |
| CDY33062 | Canola | mitochondrion, plastid | 16.63 | 16.32 |
| CDY35074 | Canola | cytosol | 7.73 | 15.79 |
| CDY17172 | Canola | cytosol | 4.92 | 14.58 |
| CDY15707 | Canola | cytosol, plastid | 11.01 | 13.31 |
| CDY03921 | Canola | cytosol, extracellular, plasma membrane | 8.43 | 10.2 |
Protein Annotations
| EnsemblPlants:CDX85842 | EnsemblPlantsGene:GSBRNA2T00143626001 | Gene3D:2.120.10.80 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | PANTHER:PTHR24413 | PANTHER:PTHR24413:SF133 | PFAM:PF01344 |
| ProteinID:CDX85842 | ProteinID:CDX85842.1 | SEG:seg | SMART:SM00612 | SUPFAM:SSF117281 | UniParc:UPI0004EB8419 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaC06g22920D
Coordinates
chrLK031843:+:210039..212267
Molecular Weight (calculated)
47065.3 Da
IEP (calculated)
7.712
GRAVY (calculated)
-0.221
Length
427 amino acids
Sequence
(BLAST)
(BLAST)
001: MLEAPSYLVS RDLPSSCEEE SKWIYNAHCV LQLSFKKRLL DDTEGSYRSK MLRVDETYQR SNQSQQGGGD QQIPPVTTLD QNALLNCLAH CSLSDFRSIA
101: STNRTFRSLI KNSEIYRLRR AKGIVEHWIY FSCVLLEWEA YDPNGDRWLR VPKMTVNECF KSSDKESLAV GTELLVFGKE ILSHVIYKYS ILTNTWTSGM
201: QMNAPRCLFG SASLGEIAVV AGGCGPRGQI LNSAEVYNSE TGEWTVIPSM NKARKMCSSV FMDGNFYVLG GIGEGNTKML MCGEVYDLKK RTWTVIPNML
301: QGSNGGGGGG DSSAAAVSGA PPLLAVVKDE LYAANYAQQE VRKYDKRCNV WNRVGSLPER ASSMNGWGMA FRACGDQLVV VGGPRALGGG FIEINACVPR
401: EGEALHWRVL ASKPSESFVY NCAVMGC
101: STNRTFRSLI KNSEIYRLRR AKGIVEHWIY FSCVLLEWEA YDPNGDRWLR VPKMTVNECF KSSDKESLAV GTELLVFGKE ILSHVIYKYS ILTNTWTSGM
201: QMNAPRCLFG SASLGEIAVV AGGCGPRGQI LNSAEVYNSE TGEWTVIPSM NKARKMCSSV FMDGNFYVLG GIGEGNTKML MCGEVYDLKK RTWTVIPNML
301: QGSNGGGGGG DSSAAAVSGA PPLLAVVKDE LYAANYAQQE VRKYDKRCNV WNRVGSLPER ASSMNGWGMA FRACGDQLVV VGGPRALGGG FIEINACVPR
401: EGEALHWRVL ASKPSESFVY NCAVMGC
001: MLEAPSYLVS RDLPSSCEEE SKWIYNAHCV LQLSLRKRLL DDTDVEGSSA KKMLRVDHGS RGESDKITDS LQLAKTYQSS NQSQQGGGGD QQSSPVTRLD
101: QNALLNCLAH CSLSDFGSIA STNRTFRSLI KDSELYRLRR AKGIVEHWIY FSCRLLEWEA YDPNGDRWLR VPKMTFNECF MCSDKESLAV GTELLVFGKE
201: IMSHVIYRYS ILTNTWTSGM QMNVPRCLFG SASLGEIAVI AGGCDPRGRI LSSAELYNSE TGEWTVIPSM NKARKMCSSV FMDGNFYCIG GIGEGNSKML
301: LCGEVYDLKK KTWTLIPNML PERSSGGGGD QAKEIAAATA ASEAPPLVAV VKDELYAANY AQQEVKKYDK RLNVWNKVGN LPERASSMNG WGMAFRACGD
401: QLVVVGGPRA IGGGFIEINA CVPSEGTQLH WRVLASKPSG NFVYNCAVMG C
101: QNALLNCLAH CSLSDFGSIA STNRTFRSLI KDSELYRLRR AKGIVEHWIY FSCRLLEWEA YDPNGDRWLR VPKMTFNECF MCSDKESLAV GTELLVFGKE
201: IMSHVIYRYS ILTNTWTSGM QMNVPRCLFG SASLGEIAVI AGGCDPRGRI LSSAELYNSE TGEWTVIPSM NKARKMCSSV FMDGNFYCIG GIGEGNSKML
301: LCGEVYDLKK KTWTLIPNML PERSSGGGGD QAKEIAAATA ASEAPPLVAV VKDELYAANY AQQEVKKYDK RLNVWNKVGN LPERASSMNG WGMAFRACGD
401: QLVVVGGPRA IGGGFIEINA CVPSEGTQLH WRVLASKPSG NFVYNCAVMG C
Arabidopsis Description
F-box/kelch-repeat protein At1g74510 [Source:UniProtKB/Swiss-Prot;Acc:Q9CA63]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.