Factsheet for Bra003796.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX68177	Canola	cytosol	97.66	100.0
CDX85842	Canola	cytosol	99.3	99.3
Bra015905.1-P	Field mustard	cytosol	82.44	85.44
AT1G74510.2	Thale cress	cytosol	88.29	83.59
Bra008155.1-P	Field mustard	cytosol	55.27	79.46
Bra016297.1-P	Field mustard	cytosol	51.76	51.88
Bra026838.1-P	Field mustard	nucleus	49.41	51.84
Bra017407.1-P	Field mustard	nucleus, plastid	52.22	50.8
Bra026575.1-P	Field mustard	nucleus	52.22	50.23
Bra024801.1-P	Field mustard	nucleus	51.52	48.57
Bra002471.1-P	Field mustard	cytosol	34.66	39.47
Bra032052.1-P	Field mustard	cytosol	14.99	36.36
Bra032983.1-P	Field mustard	cytosol	28.34	29.44
Bra025251.1-P	Field mustard	cytosol	29.51	29.1
Bra034944.1-P	Field mustard	cytosol	27.17	28.36
Bra010784.1-P	Field mustard	cytosol	25.76	27.71
Bra001739.1-P	Field mustard	cytosol	17.8	21.97
Bra037535.1-P	Field mustard	cytosol	17.8	21.9
Bra033998.1-P	Field mustard	cytosol	17.33	20.44
Bra004227.1-P	Field mustard	cytosol	17.1	19.57
Bra012304.1-P	Field mustard	cytosol	19.91	18.2
Bra003447.1-P	Field mustard	cytosol	15.22	18.11
Bra010942.1-P	Field mustard	plastid	14.29	17.68
Bra032358.1-P	Field mustard	mitochondrion, plastid	16.16	17.34
Bra031360.1-P	Field mustard	plastid	9.84	17.21
Bra030872.1-P	Field mustard	cytosol	16.86	16.55
Bra037989.1-P	Field mustard	cytosol, plastid	16.86	16.55
Bra011908.1-P	Field mustard	mitochondrion	16.86	16.55
Bra007843.1-P	Field mustard	cytosol	14.29	16.4
Bra026073.1-P	Field mustard	cytosol	7.73	15.94
Bra005497.1-P	Field mustard	cytosol	4.92	14.58
Bra030045.1-P	Field mustard	cytosol	14.99	13.59
Bra030046.1-P	Field mustard	cytosol, plastid	11.01	13.31

Protein Annotations

EnsemblPlants:Bra003796.1	EnsemblPlants:Bra003796.1-P	EnsemblPlantsGene:Bra003796	Gene3D:2.120.10.80	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	PANTHER:PTHR24413	PANTHER:PTHR24413:SF133
PFAM:PF01344	SEG:seg	SMART:SM00612	SUPFAM:SSF117281	UniParc:UPI00025416A9	UniProt:M4CHW3
MapMan:35.1	:	:	:	:	:

Description

AT1G74510 (E=1e-180) | kelch repeat-containing F-box family protein

Coordinates

chrA07:-:15110736..15112019

Molecular Weight (calculated)

47045.3 Da

IEP (calculated)

7.712

GRAVY (calculated)

-0.215

Length

427 amino acids

Sequence
(BLAST)

001: MLEAPSYLVS RDLPSSCEEE SKWIYNAHCV LQLSLKKRLL DDTEGSYRSK MLRVDETYQR SNQSQQGGGD QQIPPVTTLD QNALLNCLAH CSLSDFRSIA
101: STNRTFRSLI KNSELYRLRR AKGIVEHWIY FSCVLLEWEA YDPNGDRWLR VPKMTVNECF KSSDKESLAV GTELLVFGKE ILSHVIYKYS ILTNTWTSGM
201: QMNAPRCLFG SASLGEIAVV AGGCGPRGQI LNSAEVYNSE TGEWTVIPSM NKARKMCSSV FMDGNFYVLG GIGEGNTKML MCGEVYDLKK RTWTVIPNML
301: QGSNGGGGGA DSSAAAVSGA PPLLAVVKDE LYAANYAQQE VRKYDKRCNV WNRVGSLPER ASSMNGWGMA FRACGDQLVV VGGPRALGGG FIEINACVPR
401: EGEALHWRVL ASKPSESFVY NCAVMGC

Best Arabidopsis Sequence Match ( AT1G74510.3 )
(BLAST)

001: MLEAPSYLVS RDLPSSCEEE SKWIYNAHCV LQLSLRKRLL DDTDVEGSSA KKMLRVDHGS RGESDKITDS LQLAKTYQSS NQSQQGGGGD QQSSPVTRLD
101: QNALLNCLAH CSLSDFGSIA STNRTFRSLI KDSELYRLRR AKGIVEHWIY FSCRLLEWEA YDPNGDRWLR VPKMTFNECF MCSDKESLAV GTELLVFGKE
201: IMSHVIYRYS ILTNTWTSGM QMNVPRCLFG SASLGEIAVI AGGCDPRGRI LSSAELYNSE TGEWTVIPSM NKARKMCSSV FMDGNFYCIG GIGEGNSKML
301: LCGEVYDLKK KTWTLIPNML PERSSGGGGD QAKEIAAATA ASEAPPLVAV VKDELYAANY AQQEVKKYDK RLNVWNKVGN LPERASSMNG WGMAFRACGD
401: QLVVVGGPRA IGGGFIEINA CVPSEGTQLH WRVLASKPSG NFVYNCAVMG C

Arabidopsis Description

F-box/kelch-repeat protein At1g74510 [Source:UniProtKB/Swiss-Prot;Acc:Q9CA63]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.