Factsheet for Bra002471.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY31534	Canola	cytosol	100.0	100.0
CDX80156	Canola	cytosol	99.2	98.15
AT5G60570.2	Thale cress	cytosol	92.27	88.04
Solyc11g069320.1.1	Tomato	plastid	43.2	74.31
VIT_06s0004g02980.t01	Wine grape	cytosol	68.8	70.88
KRH26429	Soybean	cytosol	66.67	68.68
KRH29930	Soybean	cytosol	61.07	65.99
KRH24879	Soybean	cytosol	69.07	65.24
PGSC0003DMT400020936	Potato	cytosol	66.93	64.69
KRH22905	Soybean	cytosol	66.67	64.27
KRH12864	Soybean	cytosol, plasma membrane	53.07	61.23
KXG27134	Sorghum	cytosol	43.2	60.22
GSMUA_Achr3P23350_001	Banana	cytosol, extracellular	50.93	47.39
TraesCS2D01G463000.1	Wheat	cytosol	54.67	45.86
GSMUA_Achr9P30470_001	Banana	cytosol	47.73	45.78
TraesCS2A01G462600.1	Wheat	cytosol	54.13	45.21
TraesCS2B01G484200.1	Wheat	cytosol	53.87	44.99
HORVU2Hr1G103880.2	Barley	cytosol	53.07	44.62
Zm00001d026321_P001	Maize	cytosol	52.8	44.2
Os04t0619300-01	Rice	cytosol, extracellular	55.47	43.7
OQU82347	Sorghum	mitochondrion	53.87	42.8
Zm00001d002284_P003	Maize	mitochondrion	54.13	41.6
Bra008155.1-P	Field mustard	cytosol	32.53	41.08
GSMUA_Achr11P...	Banana	cytosol	45.87	39.09
Zm00001d007538_P001	Maize	cytosol	30.13	38.05
Bra016297.1-P	Field mustard	cytosol	43.2	38.03
Bra015905.1-P	Field mustard	cytosol	40.8	37.14
Bra026838.1-P	Field mustard	nucleus	39.47	36.36
Bra026575.1-P	Field mustard	nucleus	42.4	35.81
Bra017407.1-P	Field mustard	nucleus, plastid	41.6	35.54
Bra003796.1-P	Field mustard	cytosol	39.47	34.66
Bra024801.1-P	Field mustard	nucleus	41.07	34.0
Bra032052.1-P	Field mustard	cytosol	15.47	32.95
Bra032983.1-P	Field mustard	cytosol	32.53	29.68
Zm00001d019862_P001	Maize	cytosol	52.27	28.66
Bra025251.1-P	Field mustard	cytosol	32.53	28.18
Bra010784.1-P	Field mustard	cytosol	28.8	27.2
Bra034944.1-P	Field mustard	cytosol	28.0	25.67
Bra037535.1-P	Field mustard	cytosol	21.87	23.63
Bra001739.1-P	Field mustard	cytosol	21.6	23.41
Bra033998.1-P	Field mustard	cytosol	21.33	22.1
Bra004227.1-P	Field mustard	cytosol	20.8	20.91
Bra032358.1-P	Field mustard	mitochondrion, plastid	21.87	20.6
Bra007843.1-P	Field mustard	cytosol	18.93	19.09
Bra026073.1-P	Field mustard	cytosol	10.4	18.84
Bra010942.1-P	Field mustard	plastid	17.33	18.84
Bra011908.1-P	Field mustard	mitochondrion	21.6	18.62
Bra037989.1-P	Field mustard	cytosol, plastid	21.07	18.16
Bra031360.1-P	Field mustard	plastid	11.73	18.03
Bra030872.1-P	Field mustard	cytosol	20.8	17.93
Bra003447.1-P	Field mustard	cytosol	16.8	17.55
Bra005497.1-P	Field mustard	cytosol	6.67	17.36
Bra012304.1-P	Field mustard	cytosol	21.33	17.13
Bra030046.1-P	Field mustard	cytosol, plastid	14.4	15.3
Bra030045.1-P	Field mustard	cytosol	15.47	12.31

Protein Annotations

Gene3D:2.120.10.80	MapMan:35.1	EnsemblPlantsGene:Bra002471	EnsemblPlants:Bra002471.1	EnsemblPlants:Bra002471.1-P	InterPro:F-box-like_dom_sf
InterPro:F-box_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	InterPro:IPR001810	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1
UniProt:M4CE40	PFAM:PF00646	PFAM:PF01344	PANTHER:PTHR24413	PANTHER:PTHR24413:SF169	SMART:SM00612
SUPFAM:SSF117281	SUPFAM:SSF81383	UniParc:UPI00025440DE	SEG:seg	:	:

Description

AT5G60570 (E=5e-205) | kelch repeat-containing F-box family protein

Coordinates

chrA10:+:9329898..9331025

Molecular Weight (calculated)

41791.6 Da

IEP (calculated)

7.734

GRAVY (calculated)

-0.133

Length

375 amino acids

Sequence
(BLAST)

001: MAAEEQSQVS ASASVVENDA QRLRLGSSDS LLPGLIDDVA LNCLAWVPRT DYPSLSCVSK KYNNLIKSGH LFGLRKELGI VEYLVFMVCD PRGWLMFSPT
101: KKKWMVLPKM PCDECFNHAD KESLAVDDEL LVFGRELFQF AIWKYGLRSR RWVKCEGMHR PRCLFASGSL GGIAIVAGGT DMNGNILASA ELYDSSSGRW
201: EMLPNMHSPR RLCSGFFMDG RFYVVGGMSS PNVSVTCGEE FDLETRKWRK IEGMYPNVNR AAQAPPLVVV VNNELFTLEY LTNMVKRYDK ERNKWEVMGR
301: LPPMVDSSNG WGLAFKPCGD QLLVVCGQRG SNGEGVVVNA WCPKTGARDG NLDWKVIGVK ENVGVFVYNC AVMGC

Best Arabidopsis Sequence Match ( AT5G60570.2 )
(BLAST)

001: MAAEEHSNKR REVSASASAS ASASVVVNLR VGEEDNDGHR LRLGSSDSVL PGLIDDVALN CLAWVPRSDY PSLSCVNKKY NKLINSGHLF ALRKELGIVE
101: YLVFMVCDPR GWLMFSPMKK KWMVLPKMPC DECFNHADKE SLAVDDELLV FGRELFQFAI WKYSLRSRCW VKCEGMHRPR CLFASGSLGG IAIVAGGTDM
201: NGNILASAEL YDSSSGRWEM LPNMHSPRRL CSGFFMDGKF YVIGGMSSPN VSVTFGEEFD LETRKWRKIE GMYPNVNRAA QAPPLVVVVN NELFTLEYST
301: NMVKKYDKVK NKWEVMGRLP PMVDSSNGWG LAFKPCGDQL LVFCGQRGPH GEGIVVNSWC PKSGAKDGNL DWKVLGVKEN VGVFVYNCAV MGC

Arabidopsis Description

F-box/kelch-repeat protein At5g60570 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKJ0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.