CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH26429	Soybean	cytosol	91.0	97.25
KRH29930	Soybean	cytosol	73.52	82.42
Solyc11g069320.1.1	Tomato	plastid	45.76	81.65
KRH24879	Soybean	cytosol	81.49	79.85
VIT_06s0004g02980.t01	Wine grape	cytosol	72.24	77.2
KRH12864	Soybean	cytosol, plasma membrane	59.9	71.69
PGSC0003DMT400020936	Potato	cytosol	69.67	69.85
Bra002471.1-P	Field mustard	cytosol	64.27	66.67
CDY31534	Canola	cytosol	64.27	66.67
AT5G60570.2	Thale cress	cytosol	66.58	65.9
CDX80156	Canola	cytosol	64.01	65.7
KXG27134	Sorghum	cytosol	44.99	65.06
GSMUA_Achr3P23350_001	Banana	cytosol, extracellular	55.27	53.35
GSMUA_Achr9P30470_001	Banana	cytosol	52.96	52.69
TraesCS2D01G463000.1	Wheat	cytosol	58.1	50.56
TraesCS2B01G484200.1	Wheat	cytosol	58.1	50.33
TraesCS2A01G462600.1	Wheat	cytosol	58.1	50.33
HORVU2Hr1G103880.2	Barley	cytosol	57.58	50.22
Zm00001d026321_P001	Maize	cytosol	57.33	49.78
Os04t0619300-01	Rice	cytosol, extracellular	59.9	48.95
OQU82347	Sorghum	mitochondrion	58.61	48.31
Zm00001d002284_P003	Maize	mitochondrion	59.13	47.13
GSMUA_Achr11P...	Banana	cytosol	49.36	43.64
Zm00001d007538_P001	Maize	cytosol	32.13	42.09
KRH63378	Soybean	cytosol	47.04	41.5
KRH54527	Soybean	cytosol	46.79	41.27
KRH03453	Soybean	cytosol	42.93	40.93
KRH56929	Soybean	cytosol	40.1	38.33
KRH74828	Soybean	cytosol	47.3	34.26
KRG94518	Soybean	mitochondrion	35.22	34.16
KRH70694	Soybean	cytosol	47.3	34.14
KRH45883	Soybean	cytosol	47.3	34.14
KRG99114	Soybean	cytosol	47.04	33.95
KRH06951	Soybean	cytosol	34.96	33.66
Zm00001d019862_P001	Maize	cytosol	56.56	32.16
KRH57678	Soybean	cytosol	32.13	31.73
KRH67237	Soybean	cytosol	20.05	22.61
KRG95556	Soybean	cytosol	20.05	22.61
KRH11716	Soybean	cytosol, golgi, plastid	21.08	22.04
KRH32035	Soybean	cytosol	19.28	21.8
KRH71403	Soybean	cytosol	19.28	21.8
KRH31463	Soybean	cytosol	21.08	21.3
KRG97442	Soybean	cytosol, nucleus, peroxisome	20.05	21.08
KRH48156	Soybean	cytosol	19.02	20.44
KRH48153	Soybean	cytosol	18.77	20.17
KRH58897	Soybean	cytosol	22.62	20.14
KRH42810	Soybean	cytosol	22.62	20.14
KRH48154	Soybean	cytosol	19.02	20.11
KRG93237	Soybean	cytosol	22.11	20.09
KRH11179	Soybean	mitochondrion, plastid	20.82	20.0
KRH56558	Soybean	cytosol	21.85	19.86
KRH36711	Soybean	cytosol	20.57	19.85
KRH42654	Soybean	cytosol	19.79	19.85
KRH21075	Soybean	mitochondrion	20.31	19.51
KRH42190	Soybean	cytosol, plastid	23.91	19.33
KRH62415	Soybean	cytosol	13.62	19.2
KRH65052	Soybean	cytosol	15.68	19.06
KRH58301	Soybean	cytosol	23.14	18.71
KRH18847	Soybean	cytosol	22.62	18.53
KRH53131	Soybean	cytosol	22.62	18.49
KRG93186	Soybean	cytosol	18.77	18.34
KRH16647	Soybean	cytosol, plastid	21.59	17.61
KRH72270	Soybean	cytosol	5.91	17.56
KRH65051	Soybean	cytosol	14.65	17.38
KRH61941	Soybean	plastid	14.91	16.52
KRH52601	Soybean	extracellular, golgi	16.45	16.04
KRH55297	Soybean	cytosol	9.25	12.29

Protein Annotations

EntrezGene:100813839	Gene3D:2.120.10.80	MapMan:35.1	EMBL:ACUP02008440	InterPro:F-box-like_dom_sf	EnsemblPlantsGene:GLYMA_13G326800
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987
GO:GO:0019005	GO:GO:0019538	GO:GO:0030162	GO:GO:0031625	GO:GO:0042787	GO:GO:0043161
UniProt:I1M4L4	InterPro:IPR015915	EnsemblPlants:KRH22905	ProteinID:KRH22905	ProteinID:KRH22905.1	InterPro:Kelch-typ_b-propeller
InterPro:Kelch_1	PFAM:PF01344	PANTHER:PTHR24413	PANTHER:PTHR24413:SF169	SMART:SM00612	SUPFAM:SSF117281
SUPFAM:SSF81383	UniParc:UPI000233AC7F	:	:	:	:

Description

hypothetical protein

Coordinates

chr13:-:42164386..42166827

Molecular Weight (calculated)

42981.8 Da

IEP (calculated)

6.631

GRAVY (calculated)

-0.101

Length

389 amino acids

Sequence
(BLAST)

001: MTKKLRLGCS FQGEEDGKKV NNFLEMDRGE GVNDGFSGPG PNDSLIPGLI DDVALNCLAW VSGSDYAVLS CINKRFNKLI NSGYLYGLRK QLGAVEHLVY
101: MVCDPRGWVA FDPKINRWIS LPKIPCDECF NHADKESLAV GCELLVFGRE LMEFAIWKYS MICRGWVKCQ EMNQPRCLFG SSSLGSIAIV AGGSDKYGNV
201: LKSAELYDSS TGMWELLPNM HAPRRLCSGF FMDGKFYVIG GMSSTTVSLS CGEEYDLKTR SWRKIEGMYP YVNVGVQAPP LVAVVDNQLY AVEHLTNMVK
301: KYDKERNTWN ELGRLPVRAD SSNGWGLAFK ACGEQLLVVG GQRGPEGEAI VLSSWCPKSG ISNGTIDWQV LGVKEHVGVF VYNCAVMGC

Best Arabidopsis Sequence Match ( AT5G60570.2 )
(BLAST)

001: MAAEEHSNKR REVSASASAS ASASVVVNLR VGEEDNDGHR LRLGSSDSVL PGLIDDVALN CLAWVPRSDY PSLSCVNKKY NKLINSGHLF ALRKELGIVE
101: YLVFMVCDPR GWLMFSPMKK KWMVLPKMPC DECFNHADKE SLAVDDELLV FGRELFQFAI WKYSLRSRCW VKCEGMHRPR CLFASGSLGG IAIVAGGTDM
201: NGNILASAEL YDSSSGRWEM LPNMHSPRRL CSGFFMDGKF YVIGGMSSPN VSVTFGEEFD LETRKWRKIE GMYPNVNRAA QAPPLVVVVN NELFTLEYST
301: NMVKKYDKVK NKWEVMGRLP PMVDSSNGWG LAFKPCGDQL LVFCGQRGPH GEGIVVNSWC PKSGAKDGNL DWKVLGVKEN VGVFVYNCAV MGC

Arabidopsis Description

F-box/kelch-repeat protein At5g60570 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKJ0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.