CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH70694	Soybean	cytosol	94.79	94.43
KRH45883	Soybean	cytosol	78.03	77.74
KRG99114	Soybean	cytosol	76.16	75.88
CDY33755	Canola	cytosol	16.76	73.17
Solyc04g005870.1.1	Tomato	cytosol	7.08	71.7
Solyc04g005670.1.1	Tomato	cytosol	53.07	70.54
PGSC0003DMT400007346	Potato	nucleus	55.49	68.82
TraesCS4D01G286700.1	Wheat	cytosol	40.22	65.45
CDY62015	Canola	nucleus	49.91	64.58
CDY60836	Canola	cytosol	45.25	63.95
Bra026838.1-P	Field mustard	nucleus	48.42	63.88
TraesCS4A01G493800.1	Wheat	cytosol	29.8	63.74
CDY49094	Canola	nucleus	50.28	63.68
Bra017407.1-P	Field mustard	nucleus, plastid	51.96	63.55
AT1G14330.1	Thale cress	nucleus	51.77	63.04
CDX81631	Canola	nucleus	47.86	62.84
Bra026575.1-P	Field mustard	nucleus	51.77	62.61
CDY09349	Canola	nucleus	51.77	62.61
AT1G26930.1	Thale cress	cytosol	48.98	62.47
CDY62176	Canola	nucleus	51.77	62.19
KRH63378	Soybean	cytosol	50.47	61.45
Bra024801.1-P	Field mustard	nucleus	51.77	61.37
CDY17425	Canola	cytosol	45.81	61.35
CDY03028	Canola	cytosol	51.21	61.25
AT2G02870.1	Thale cress	nucleus	53.26	61.24
KRH54527	Soybean	cytosol	50.28	61.22
CDY45190	Canola	nucleus	51.58	61.15
CDY52764	Canola	cytosol	47.86	60.47
PGSC0003DMT400059324	Potato	cytosol	54.0	60.42
Bra016297.1-P	Field mustard	cytosol	47.86	60.33
CDY46430	Canola	cytosol	47.86	60.33
CDY16205	Canola	nucleus	47.49	60.28
GSMUA_Achr4P09990_001	Banana	cytosol	47.49	59.44
VIT_01s0026g02080.t01	Wine grape	nucleus	59.78	59.33
KXG30756	Sorghum	cytosol	45.81	57.88
Zm00001d052253_P001	Maize	cytosol	45.44	57.68
GSMUA_Achr8P01380_001	Banana	cytosol	40.78	57.63
Os02t0748300-01	Rice	cytosol	45.44	57.28
TraesCS6B01G334300.1	Wheat	cytosol, nucleus, plastid	45.25	57.18
TraesCS6D01G285100.1	Wheat	cytosol, nucleus, plastid	45.25	57.18
TraesCS6A01G306000.1	Wheat	cytosol	45.07	56.94
TraesCS7A01G004600.1	Wheat	cytosol	38.55	56.87
GSMUA_Achr7P20970_001	Banana	cytosol	41.71	56.71
HORVU6Hr1G075590.1	Barley	cytosol, nucleus, plastid	44.88	56.71
KRH03453	Soybean	cytosol	43.02	56.62
Zm00001d048310_P001	Maize	cytosol	44.69	56.07
KXG40080	Sorghum	cytosol	44.32	55.61
Os03t0171600-01	Rice	cytosol	44.51	55.45
GSMUA_Achr4P00520_001	Banana	cytosol	40.04	55.27
TraesCS4A01G016200.1	Wheat	cytosol	44.13	54.99
GSMUA_Achr1P21630_001	Banana	cytosol	38.55	54.91
Zm00001d027856_P001	Maize	cytosol	43.39	54.31
KRH56929	Soybean	cytosol	41.15	54.3
HORVU4Hr1G075310.1	Barley	cytosol	44.13	53.99
TraesCS7D01G007100.1	Wheat	cytosol	37.24	53.76
CDY33754	Canola	nucleus	24.95	53.6
TraesCS7D01G005100.1	Wheat	cytosol	21.42	53.49
OQU91835	Sorghum	cytosol, nucleus, plastid	44.13	53.38
Zm00001d014203_P001	Maize	cytosol, nucleus, plastid	43.95	53.27
Zm00001d033012_P001	Maize	cytosol	44.13	53.14
PGSC0003DMT400091785	Potato	cytosol, mitochondrion, plastid	15.27	51.9
GSMUA_Achr8P17960_001	Banana	nucleus	39.66	51.2
GSMUA_Achr10P...	Banana	nucleus	40.6	50.11
KRH26429	Soybean	cytosol	33.71	49.73
TraesCS4A01G487800.1	Wheat	cytosol	23.65	49.22
Os11t0602800-01	Rice	nucleus	39.48	49.07
HORVU2Hr1G057140.1	Barley	cytosol	16.95	48.92
HORVU2Hr1G057150.1	Barley	cytosol	16.95	48.92
KRH29930	Soybean	cytosol	31.28	48.41
GSMUA_Achr2P14920_001	Banana	mitochondrion	42.46	47.7
Zm00001d048898_P001	Maize	cytosol	38.36	47.36
KRH24879	Soybean	cytosol	35.01	47.36
KRH22905	Soybean	cytosol	34.26	47.3
PGSC0003DMT400007391	Potato	cytosol	11.73	47.01
Zm00001d007596_P001	Maize	nucleus, plastid	38.55	46.94
TraesCS4A01G492300.1	Wheat	cytosol, golgi, plastid	33.52	46.75
OQU83795	Sorghum	cytosol	38.17	45.96
KRH12864	Soybean	cytosol, plasma membrane	27.75	45.85
Solyc05g007220.2.1	Tomato	nucleus	54.19	45.19
TraesCS4A01G489600.1	Wheat	cytosol	31.66	44.97
TraesCS4A01G489300.1	Wheat	cytosol	31.84	44.88
GSMUA_Achr3P01570_001	Banana	golgi	39.85	43.76
GSMUA_Achr4P24130_001	Banana	nucleus	41.71	43.33
HORVU7Hr1G000010.5	Barley	cytosol	32.96	40.41
HORVU7Hr1G000070.1	Barley	cytosol	35.57	36.38
TraesCS4A01G491100.1	Wheat	cytosol	34.64	35.36
KRH06951	Soybean	cytosol	26.44	35.15
KRG94518	Soybean	mitochondrion	25.88	34.66
KRH57678	Soybean	cytosol	23.84	32.49
TraesCS4A01G493200.1	Wheat	cytosol, plasma membrane	27.93	31.65
KRH67237	Soybean	cytosol	13.97	21.74
KRH42654	Soybean	cytosol	15.64	21.65
KRH42810	Soybean	cytosol	17.5	21.51
KRH11716	Soybean	cytosol, golgi, plastid	14.9	21.51
KRH72270	Soybean	cytosol	5.21	21.37
KRH58897	Soybean	cytosol	17.13	21.05
KRH31463	Soybean	cytosol	15.08	21.04
KRG93237	Soybean	cytosol	16.76	21.03
KRG95556	Soybean	cytosol	13.41	20.87
KRG97442	Soybean	cytosol, nucleus, peroxisome	14.34	20.81
KRH56558	Soybean	cytosol	16.57	20.79
KRH48153	Soybean	cytosol	13.97	20.72
KRH48156	Soybean	cytosol	13.78	20.44
KRH48154	Soybean	cytosol	13.78	20.11
KRG93186	Soybean	cytosol	14.9	20.1
KRH32035	Soybean	cytosol	12.85	20.06
KRH71403	Soybean	cytosol	12.85	20.06
KRH65052	Soybean	cytosol	11.73	19.69
KRH36711	Soybean	cytosol	14.71	19.6
KRH62415	Soybean	cytosol	10.06	19.57
KRH18847	Soybean	cytosol	17.13	19.37
KRH58301	Soybean	cytosol	17.32	19.33
KRH42190	Soybean	cytosol, plastid	17.13	19.13
KRH16647	Soybean	cytosol, plastid	16.57	18.66
KRH53131	Soybean	cytosol	16.39	18.49
KRH65051	Soybean	cytosol	10.8	17.68
KRH11179	Soybean	mitochondrion, plastid	12.66	16.79
KRH21075	Soybean	mitochondrion	12.48	16.54
KRH61941	Soybean	plastid	10.8	16.52
KRH55297	Soybean	cytosol	8.94	16.38
KRH52601	Soybean	extracellular, golgi	11.55	15.54

Protein Annotations

EntrezGene:100818865	Gene3D:2.120.10.80	MapMan:35.1	EMBL:ACUP02000078	EnsemblPlantsGene:GLYMA_01G045100	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0019005
GO:GO:0019538	GO:GO:0030162	GO:GO:0031625	GO:GO:0042787	GO:GO:0043161	UniProt:I1J5N5
InterPro:IPR015915	EnsemblPlants:KRH74828	ProteinID:KRH74828	ProteinID:KRH74828.1	ProteinID:KRH74829.1	InterPro:Kelch-typ_b-propeller
InterPro:Kelch_1	PFAM:PF01344	PANTHER:PTHR24413	PANTHER:PTHR24413:SF138	SMART:SM00612	SUPFAM:SSF117281
UniParc:UPI0002337825	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:5059854..5063734

Molecular Weight (calculated)

60428.2 Da

IEP (calculated)

4.662

GRAVY (calculated)

-0.542

Length

537 amino acids

Sequence
(BLAST)

001: MLDGRSCVVP RMFSGTCQAE NDWSYMKCLL ELDIKNGKRP MEIDDVEEDE PHQPRKCTKK LDSCHRVEMA RISFQRQSIE AKDSVVPPMD QETIEPLSVC
101: QGVVEEDGAL TDQLLDEKEQ EVDGYLMDFG DHQSDKQQQA QTGDSSDFGA QLSDEDQLQH DDENLLNSSE QQSEGQQQHH GGDSSDSSSL LPRMNRDSSI
201: ACLSRCSRSD YGSLASLNRS FWNIIRSGEL YQWRRLNGIM EHWIYFSCAL LEWEAYDPIR QRWMHLPRMA SNECFMCSDK ESLAVGTELL VFGRELRSHV
301: TYRYSLLTNS WTSGTRMNAP RCLFGSASLG EIAILAGGCD SEGHILDSAE LYNSETQTWE TLPCMKKPRK MCSGVFMDGK FYVIGGIGGC DSKLLTCGEE
401: YNLQTRTWTE IPSMSPGRSS RGPEMPATAE APPLVAVVND ELYAADYADM EVKKYDKERK VWLTIGRLPE RAVSMNGWGL AFRACGDKLI VIGGPRTHGE
501: GFIELNSWVP SEGPPRWDLL ARKRSGNFVY NCAVMGC

Best Arabidopsis Sequence Match ( AT2G02870.2 )
(BLAST)

001: MLEDRSPDSC LSTRVFSSSR LSESNWSNSY MYPEDDDKLL GNGKRALEVV GEVRQTKSLK LMGFSIIYDS DSSDYSLSGG EEQADAAIGD GSSSRQEQEQ
101: QSDFNDNGGD SSDSHSLINE IGRDNSIDCL IRCSRSDYGS IASLNRNFRS LVKSGEIYRL RRQNGFVEHW VYFSCQLLEW VAFDPVERRW MQLPTMPSSV
201: TFMCADKESL AVGTDLLVLG KDDFSSHVIY RYSLLTNSWS SGMKMNSPRC LFGSASLGEI AIFAGGCDSQ GKILDFAEMY NSELQTWITL PRMNKPRKMC
301: SGVFMDGKFY VIGGIGGADS KGLTCGEEYD LETKKWTQIP DLSPPRSRAD QADMSPAAEA PPLVAVVNNQ LYAADHADME VRKYDKENKK WLTVGRLPER
401: AGSVNGWGLA FRACGERLIV IGGPKCSGGG FIELNSWIPS DGGPPQWTLL DRKHSPTFVY NCAVMGC

Arabidopsis Description

SKIP11F-box/kelch-repeat protein SKIP11 [Source:UniProtKB/Swiss-Prot;Acc:Q8L736]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.