CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
cytosol 3
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d048898_P001	Maize	cytosol	87.0	89.2
Zm00001d007596_P001	Maize	nucleus, plastid	86.1	87.07
Os11t0602800-01	Rice	nucleus	73.09	75.46
Solyc04g005870.1.1	Tomato	cytosol	6.95	58.49
GSMUA_Achr1P21630_001	Banana	cytosol	46.41	54.91
CDY33755	Canola	cytosol	14.8	53.66
KXG30756	Sorghum	cytosol	50.9	53.41
KXG40080	Sorghum	cytosol	50.67	52.8
KXG27134	Sorghum	cytosol	31.61	52.42
GSMUA_Achr8P01380_001	Banana	cytosol	43.95	51.58
GSMUA_Achr8P17960_001	Banana	nucleus	47.98	51.44
Solyc04g005670.1.1	Tomato	cytosol	46.41	51.24
OQU91835	Sorghum	cytosol, nucleus, plastid	49.78	50.0
VIT_17s0000g05920.t01	Wine grape	cytosol	48.65	48.98
CDY62015	Canola	nucleus	45.52	48.92
PGSC0003DMT400007346	Potato	nucleus	47.31	48.73
CDY49094	Canola	nucleus	45.29	47.64
GSMUA_Achr10P...	Banana	nucleus	46.41	47.59
CDX81631	Canola	nucleus	43.5	47.43
Bra026838.1-P	Field mustard	nucleus	43.27	47.42
KRH03453	Soybean	cytosol	43.27	47.3
AT1G14330.1	Thale cress	nucleus	46.41	46.94
KRH54527	Soybean	cytosol	46.19	46.71
CDY60836	Canola	cytosol	39.69	46.58
Solyc03g113010.1.1	Tomato	cytosol	45.96	46.49
KRH63378	Soybean	cytosol	45.74	46.26
KRH56929	Soybean	cytosol	42.15	46.19
CDY52764	Canola	cytosol	43.95	46.12
CDY46430	Canola	cytosol	43.95	46.01
AT1G26930.1	Thale cress	cytosol	43.27	45.84
Bra016297.1-P	Field mustard	cytosol	43.72	45.77
CDY17425	Canola	cytosol	41.03	45.64
Bra026575.1-P	Field mustard	nucleus	45.29	45.5
CDY62176	Canola	nucleus	45.52	45.41
CDY16205	Canola	nucleus	43.05	45.39
Bra017407.1-P	Field mustard	nucleus, plastid	44.62	45.33
CDY09349	Canola	nucleus	45.07	45.27
PGSC0003DMT400059324	Potato	cytosol	48.43	45.0
PGSC0003DMT400046591	Potato	extracellular	45.74	44.74
CDY45190	Canola	nucleus	45.07	44.37
Bra024801.1-P	Field mustard	nucleus	44.84	44.15
AT2G02870.1	Thale cress	nucleus	46.19	44.11
CDY03028	Canola	cytosol	44.39	44.1
GSMUA_Achr2P14920_001	Banana	mitochondrion	46.41	43.31
PGSC0003DMT400091785	Potato	cytosol, mitochondrion, plastid	14.57	41.14
GSMUA_Achr3P01570_001	Banana	golgi	45.07	41.1
GSMUA_Achr4P24130_001	Banana	nucleus	46.64	40.23
CDY33754	Canola	nucleus	22.2	39.6
PGSC0003DMT400007391	Potato	cytosol	11.66	38.81
KRH45883	Soybean	cytosol	46.64	38.59
KRG99114	Soybean	cytosol	46.41	38.4
KRH74828	Soybean	cytosol	45.96	38.17
OQU82347	Sorghum	mitochondrion	40.36	38.14
VIT_01s0026g02080.t01	Wine grape	nucleus	45.96	37.89
KRH70694	Soybean	cytosol	45.74	37.85
Solyc05g007220.2.1	Tomato	nucleus	45.52	31.52
OQU82118	Sorghum	cytosol	18.16	23.28
EER91632	Sorghum	plastid	20.18	20.59
EES06854	Sorghum	cytosol	17.49	20.37
EES06149	Sorghum	cytosol	15.47	19.94
EER95442	Sorghum	mitochondrion	18.83	19.18
EER97991	Sorghum	mitochondrion	17.49	18.84
KXG29748	Sorghum	plastid	18.16	18.62
OQU81371	Sorghum	mitochondrion	15.7	18.57
KXG24326	Sorghum	cytosol	19.28	18.38
EES05304	Sorghum	cytosol, peroxisome, plastid	17.71	17.21
EER90147	Sorghum	cytosol	14.35	16.29

Protein Annotations

Gene3D:2.120.10.80	MapMan:35.1	EntrezGene:8066690	UniProt:C5Y5V4	ProteinID:EES10058.1	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0019005
GO:GO:0019538	GO:GO:0030162	GO:GO:0031625	GO:GO:0042787	GO:GO:0043161	InterPro:IPR015915
InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	EnsemblPlants:OQU83795	ProteinID:OQU83795	ProteinID:OQU83795.1	ProteinID:OQU83796.1
PFAM:PF01344	PANTHER:PTHR24413	PANTHER:PTHR24413:SF125	SMART:SM00612	EnsemblPlantsGene:SORBI_3005G178100	SUPFAM:SSF117281
unigene:Sbi.942	UniParc:UPI0001A86A5D	RefSeq:XP_002451070.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr5:-:66009768..66016470

Molecular Weight (calculated)

48657.1 Da

IEP (calculated)

5.199

GRAVY (calculated)

-0.085

Length

446 amino acids

Sequence
(BLAST)

001: MLGEQRMILA LESASSSSSA PDLSLTLSGE LPSVSSRNCV IQSLQVGWAQ KGGGQVVEGL VNCYSKKKKK NNKIGGGGSW TPAAKSWASE MEGADESGEV
101: EVNTAELIGV IGRELAISCL LRLPRSYYYD VACVNRSFYS LVRSGELYRL RREAGIVEQM IYCSCNVLEW EGFDPCRQRW FSIPSMPPIE CFTLADKESL
201: AVGTNILVFG RRVEAHVVLS YSLLTNSWTT GEMMNTPRCL FGSASFGEKA IVAGGFGENG ALSSAELYDS EMRTWTTLPS MNRARQMCSG FFMDDKFYVI
301: GGKAEKHNEV LSCAEEFDLE NGTWRLIPDM AQGLNGGSGA PPLVAVVNNE LYAADYATKE VRKYDKENNA WITLGLLPGR YTSVHGWGIA FRSCGNMLIV
401: IGAMSVGGGG VIEICSWVPN NEPPDWKIIG TRRSGSFVYN CAVMSC

Best Arabidopsis Sequence Match ( AT1G14330.1 )
(BLAST)

001: MVEDRTYLMS RIFSSSRLSE SKWPYMYPQP EDSSESNLIN GKRALENDVD ELRQSKSPRL MGFSIHGNEA IEEDEQEQDQ SDSNNNGNSD GDSLINDIGR
101: DNSISCLIRC SRSGYGSIAS LNRSFRSLVK TGEIYRLRRQ NQIVEHWVYF SCQLLEWVAF NPFERRWMNL PTMPSGVTFM CADKESLAVG TDLLVLGKDD
201: YSSHVIYRYS LLTNSWSSGM RMNSPRCLFG SASLGEIAIF AGGFDSFGKI SDSAEMYNSE LQTWTTLPKM NKPRKMCSGV FMDGKFYVIG GIGGNDSKVL
301: TCGEEFDLET KKWTEIPEMS PPRSREMPAA AEAPPLVAVV NNELYAADHA DMEVRKYDKE SKKWFTLGRL PERADSVNGW GLAFRACGER LIVIGGPRSS
401: GGGYIELNSW IPSSDRSPPL WTLLGRKHSS NFVYNCAVMG C

Arabidopsis Description

At1g14330/F14L17_7 [Source:UniProtKB/TrEMBL;Acc:Q9M9S9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.