Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- nucleus 2
- extracellular 4
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc03g113010.1.1 | Tomato | cytosol | 94.3 | 97.51 |
| VIT_17s0000g05920.t01 | Wine grape | cytosol | 72.81 | 74.94 |
| KRH54527 | Soybean | cytosol | 65.57 | 67.8 |
| KRH63378 | Soybean | cytosol | 65.35 | 67.57 |
| PGSC0003DMT400007346 | Potato | nucleus | 62.5 | 65.82 |
| TraesCS4D01G286700.1 | Wheat | cytosol | 46.93 | 64.85 |
| TraesCS4A01G493800.1 | Wheat | cytosol | 34.21 | 62.15 |
| Zm00001d052253_P001 | Maize | cytosol | 54.17 | 58.39 |
| GSMUA_Achr4P09990_001 | Banana | cytosol | 54.82 | 58.28 |
| KXG30756 | Sorghum | cytosol | 53.95 | 57.88 |
| TraesCS6D01G285100.1 | Wheat | cytosol, nucleus, plastid | 53.73 | 57.65 |
| TraesCS6B01G334300.1 | Wheat | cytosol, nucleus, plastid | 53.73 | 57.65 |
| TraesCS6A01G306000.1 | Wheat | cytosol | 53.73 | 57.65 |
| HORVU6Hr1G075590.1 | Barley | cytosol, nucleus, plastid | 53.29 | 57.18 |
| GSMUA_Achr1P21630_001 | Banana | cytosol | 47.15 | 57.03 |
| Zm00001d048310_P001 | Maize | cytosol | 53.29 | 56.78 |
| KRH56929 | Soybean | cytosol | 50.66 | 56.76 |
| KXG40080 | Sorghum | cytosol | 53.07 | 56.54 |
| GSMUA_Achr7P20970_001 | Banana | cytosol | 48.9 | 56.46 |
| Os03t0171600-01 | Rice | cytosol | 53.29 | 56.38 |
| Os02t0748300-01 | Rice | cytosol | 52.63 | 56.34 |
| Zm00001d027856_P001 | Maize | cytosol | 52.63 | 55.94 |
| KRH03453 | Soybean | cytosol | 49.78 | 55.64 |
| GSMUA_Achr4P00520_001 | Banana | cytosol | 47.37 | 55.53 |
| TraesCS7A01G004600.1 | Wheat | cytosol | 44.08 | 55.22 |
| PGSC0003DMT400059324 | Potato | cytosol | 57.89 | 55.0 |
| HORVU4Hr1G075310.1 | Barley | cytosol | 52.85 | 54.9 |
| TraesCS4A01G016200.1 | Wheat | cytosol | 51.75 | 54.76 |
| GSMUA_Achr8P01380_001 | Banana | cytosol | 45.61 | 54.74 |
| TraesCS7D01G007100.1 | Wheat | cytosol | 43.86 | 53.76 |
| Zm00001d014203_P001 | Maize | cytosol, nucleus, plastid | 51.54 | 53.05 |
| TraesCS7D01G005100.1 | Wheat | cytosol | 25.0 | 53.02 |
| Zm00001d033012_P001 | Maize | cytosol | 51.32 | 52.47 |
| OQU91835 | Sorghum | cytosol, nucleus, plastid | 50.88 | 52.25 |
| GSMUA_Achr8P17960_001 | Banana | nucleus | 46.71 | 51.2 |
| HORVU2Hr1G057150.1 | Barley | cytosol | 20.39 | 50.0 |
| HORVU2Hr1G057140.1 | Barley | cytosol | 20.39 | 50.0 |
| Os11t0602800-01 | Rice | nucleus | 47.15 | 49.77 |
| GSMUA_Achr10P... | Banana | nucleus | 47.15 | 49.43 |
| TraesCS4A01G487800.1 | Wheat | cytosol | 27.63 | 48.84 |
| GSMUA_Achr2P14920_001 | Banana | mitochondrion | 49.78 | 47.49 |
| PGSC0003DMT400091785 | Potato | cytosol, mitochondrion, plastid | 16.45 | 47.47 |
| PGSC0003DMT400020936 | Potato | cytosol | 40.13 | 47.16 |
| Zm00001d048898_P001 | Maize | cytosol | 44.96 | 47.13 |
| Zm00001d007596_P001 | Maize | nucleus, plastid | 45.18 | 46.71 |
| TraesCS4A01G492300.1 | Wheat | cytosol, golgi, plastid | 39.25 | 46.49 |
| OQU83795 | Sorghum | cytosol | 44.74 | 45.74 |
| TraesCS4A01G489600.1 | Wheat | cytosol | 37.72 | 45.5 |
| TraesCS4A01G489300.1 | Wheat | cytosol | 37.94 | 45.41 |
| GSMUA_Achr4P24130_001 | Banana | nucleus | 48.25 | 42.55 |
| HORVU7Hr1G000010.5 | Barley | cytosol | 40.35 | 42.01 |
| GSMUA_Achr3P01570_001 | Banana | golgi | 43.86 | 40.9 |
| PGSC0003DMT400007391 | Potato | cytosol | 11.62 | 39.55 |
| HORVU7Hr1G000070.1 | Barley | cytosol | 41.89 | 36.38 |
| TraesCS4A01G491100.1 | Wheat | cytosol | 41.45 | 35.93 |
| PGSC0003DMT400021985 | Potato | nucleus | 29.39 | 32.13 |
| TraesCS4A01G493200.1 | Wheat | cytosol, plasma membrane | 32.46 | 31.22 |
| PGSC0003DMT400049746 | Potato | cytosol | 15.57 | 20.58 |
| PGSC0003DMT400013635 | Potato | cytosol | 14.91 | 19.71 |
| PGSC0003DMT400032733 | Potato | cytosol, plastid | 20.18 | 19.37 |
| PGSC0003DMT400081852 | Potato | cytosol | 17.76 | 18.54 |
| PGSC0003DMT400034149 | Potato | cytosol | 17.54 | 18.31 |
| PGSC0003DMT400000478 | Potato | nucleus | 16.01 | 18.3 |
| PGSC0003DMT400008228 | Potato | cytosol, mitochondrion, peroxisome, plastid | 15.57 | 17.66 |
Protein Annotations
| EntrezGene:102585689 | Gene3D:2.120.10.80 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller |
| InterPro:Kelch_1 | UniProt:M1BJA6 | PFAM:PF01344 | EnsemblPlantsGene:PGSC0003DMG400018088 | PGSC:PGSC0003DMG400018088 | EnsemblPlants:PGSC0003DMT400046591 |
| PANTHER:PTHR24413 | PANTHER:PTHR24413:SF133 | SMART:SM00612 | SUPFAM:SSF117281 | UniParc:UPI000294AFE4 | RefSeq:XP_006344391.1 |
| SEG:seg | : | : | : | : | : |
Description
F-box family protein [Source:PGSC_GENE;Acc:PGSC0003DMG400018088]
Coordinates
chr3:-:52840329..52844148
Molecular Weight (calculated)
50891.6 Da
IEP (calculated)
6.237
GRAVY (calculated)
-0.219
Length
456 amino acids
Sequence
(BLAST)
(BLAST)
001: MWLGVIVRPL CISSVMLEES YHVSRDLPCA CEEASKWIYY AFQVIEHSKG KRPLEDVADI GLRKSSKLLD AQEKEEAVQC LHDLSLCQEE HSDKQYESDT
101: HSDSSSLIHQ IGRDLSVNCL LHCSRSDYGS IASLNQSFRS LIQSGELYRL RRQMGIVEHW VYFSCNLLEW EAFDPIRSRW MHLPAMTSNE CFMCSDKESL
201: AVGTELLVFG KEIESHVIYK YSILTNSWSS GMKTNTPRCL FGSGSLGEIA IVAGGCDSRG NILSSAELYN SETGTWETLP SMNKPRKLCS GVFLDGKFHI
301: IGGVGVGNSN VLTCGEVYDF KARSWTEVPD MFPARNRGAG ANDAPAIAKA PPLLAVVKNE LYAAYYAENE VWKYDKRRNL WITIGRLPEQ ATSMNGWGLA
401: FRACGDQLIV IGGPRALNGR FIEINSWEPT EGAPNWNLLG RKHSGSFVYN CAVMGC
101: HSDSSSLIHQ IGRDLSVNCL LHCSRSDYGS IASLNQSFRS LIQSGELYRL RRQMGIVEHW VYFSCNLLEW EAFDPIRSRW MHLPAMTSNE CFMCSDKESL
201: AVGTELLVFG KEIESHVIYK YSILTNSWSS GMKTNTPRCL FGSGSLGEIA IVAGGCDSRG NILSSAELYN SETGTWETLP SMNKPRKLCS GVFLDGKFHI
301: IGGVGVGNSN VLTCGEVYDF KARSWTEVPD MFPARNRGAG ANDAPAIAKA PPLLAVVKNE LYAAYYAENE VWKYDKRRNL WITIGRLPEQ ATSMNGWGLA
401: FRACGDQLIV IGGPRALNGR FIEINSWEPT EGAPNWNLLG RKHSGSFVYN CAVMGC
001: MLEAPSYLVS RDLPSSCEEE SKWIYNAHCV LQLSLRKRLL DDTDVEGSSA KKMLRVDHGS RGESDKITDS LQLAKTYQSS NQSQQGGGGD QQSSPVTRLD
101: QNALLNCLAH CSLSDFGSIA STNRTFRSLI KDSELYRLRR AKGIVEHWIY FSCRLLEWEA YDPNGDRWLR VPKMTFNECF MCSDKESLAV GTELLVFGKE
201: IMSHVIYRYS ILTNTWTSGM QMNVPRCLFG SASLGEIAVI AGGCDPRGRI LSSAELYNSE TGEWTVIPSM NKARKMCSSV FMDGNFYCIG GIGEGNSKML
301: LCGEVYDLKK KTWTLIPNML PERSSGGGGD QAKEIAAATA ASEAPPLVAV VKDELYAANY AQQEVKKYDK RLNVWNKVGN LPERASSMNG WGMAFRACGD
401: QLVVVGGPRA IGGGFIEINA CVPSEGTQLH WRVLASKPSG NFVYNCAVMG C
101: QNALLNCLAH CSLSDFGSIA STNRTFRSLI KDSELYRLRR AKGIVEHWIY FSCRLLEWEA YDPNGDRWLR VPKMTFNECF MCSDKESLAV GTELLVFGKE
201: IMSHVIYRYS ILTNTWTSGM QMNVPRCLFG SASLGEIAVI AGGCDPRGRI LSSAELYNSE TGEWTVIPSM NKARKMCSSV FMDGNFYCIG GIGEGNSKML
301: LCGEVYDLKK KTWTLIPNML PERSSGGGGD QAKEIAAATA ASEAPPLVAV VKDELYAANY AQQEVKKYDK RLNVWNKVGN LPERASSMNG WGMAFRACGD
401: QLVVVGGPRA IGGGFIEINA CVPSEGTQLH WRVLASKPSG NFVYNCAVMG C
Arabidopsis Description
F-box/kelch-repeat protein At1g74510 [Source:UniProtKB/Swiss-Prot;Acc:Q9CA63]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.