Factsheet for TraesCS4D01G286700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 3
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G016200.1	Wheat	cytosol	99.09	75.87
HORVU4Hr1G075310.1	Barley	cytosol	99.39	74.72
Os03t0171600-01	Rice	cytosol	91.21	69.84
TraesCS7D01G007100.1	Wheat	cytosol	78.18	69.35
KXG40080	Sorghum	cytosol	89.09	68.69
TraesCS7D01G005100.1	Wheat	cytosol	44.24	67.91
Zm00001d027856_P001	Maize	cytosol	87.88	67.6
Zm00001d048310_P001	Maize	cytosol	87.58	67.52
CDY33755	Canola	cytosol	22.73	60.98
GSMUA_Achr1P21630_001	Banana	cytosol	66.06	57.82
GSMUA_Achr8P01380_001	Banana	cytosol	65.76	57.11
TraesCS6D01G285100.1	Wheat	cytosol, nucleus, plastid	70.0	54.35
Solyc04g005870.1.1	Tomato	cytosol	8.48	52.83
GSMUA_Achr8P17960_001	Banana	nucleus	65.45	51.92
Solyc04g005670.1.1	Tomato	cytosol	63.33	51.73
VIT_17s0000g05920.t01	Wine grape	cytosol	69.09	51.47
CDY62015	Canola	nucleus	64.24	51.08
Bra026838.1-P	Field mustard	nucleus	62.73	50.86
CDX81631	Canola	nucleus	63.03	50.86
CDY49094	Canola	nucleus	64.24	50.0
CDY60836	Canola	cytosol	57.58	50.0
GSMUA_Achr10P...	Banana	nucleus	65.76	49.89
KRH03453	Soybean	cytosol	61.52	49.75
KRH54527	Soybean	cytosol	66.36	49.66
KRH63378	Soybean	cytosol	65.76	49.21
PGSC0003DMT400007346	Potato	nucleus	63.94	48.73
Solyc03g113010.1.1	Tomato	cytosol	64.85	48.53
AT1G14330.1	Thale cress	nucleus	64.55	48.3
KRH56929	Soybean	cytosol	59.09	47.91
AT1G26930.1	Thale cress	cytosol	60.61	47.51
Bra017407.1-P	Field mustard	nucleus, plastid	63.03	47.38
Bra026575.1-P	Field mustard	nucleus	63.64	47.3
GSMUA_Achr2P14920_001	Banana	mitochondrion	68.48	47.28
CDY17425	Canola	cytosol	57.27	47.13
CDY09349	Canola	nucleus	63.33	47.07
CDY62176	Canola	nucleus	63.64	46.98
PGSC0003DMT400046591	Potato	extracellular	64.85	46.93
CDY46430	Canola	cytosol	60.3	46.71
CDY52764	Canola	cytosol	60.0	46.59
Bra016297.1-P	Field mustard	cytosol	60.0	46.48
Bra024801.1-P	Field mustard	nucleus	63.03	45.92
CDY45190	Canola	nucleus	63.03	45.92
CDY03028	Canola	cytosol	62.42	45.88
CDY16205	Canola	nucleus	58.48	45.63
AT2G02870.1	Thale cress	nucleus	64.24	45.4
PGSC0003DMT400059324	Potato	cytosol	64.24	44.17
GSMUA_Achr3P01570_001	Banana	golgi	63.94	43.15
GSMUA_Achr4P24130_001	Banana	nucleus	67.58	43.13
KRH45883	Soybean	cytosol	66.97	41.0
KRG99114	Soybean	cytosol	66.67	40.82
CDY33754	Canola	nucleus	30.61	40.4
KRH74828	Soybean	cytosol	65.45	40.22
KRH70694	Soybean	cytosol	65.45	40.07
PGSC0003DMT400091785	Potato	cytosol, mitochondrion, plastid	19.09	39.87
VIT_01s0026g02080.t01	Wine grape	nucleus	64.85	39.56
TraesCS2D01G463000.1	Wheat	cytosol	53.33	39.37
PGSC0003DMT400007391	Potato	cytosol	14.85	36.57
Solyc05g007220.2.1	Tomato	nucleus	61.52	31.52
TraesCS6D01G195800.1	Wheat	cytosol	22.73	21.25
TraesCS3D01G540000.1	Wheat	cytosol	26.06	20.14
TraesCS4D01G282200.1	Wheat	cytosol	25.15	19.9
TraesCS6D01G167900.1	Wheat	plastid	24.85	19.39
TraesCS2D01G499800.1	Wheat	mitochondrion	23.03	18.77
TraesCS1D01G136700.1	Wheat	nucleus	26.36	18.63
TraesCS6D01G043400.1	Wheat	cytosol	21.21	18.32
TraesCS2D01G279700.1	Wheat	mitochondrion	21.21	18.28
TraesCS7D01G016400.1	Wheat	cytosol, plastid	24.85	17.98
TraesCS3D01G439000.1	Wheat	cytosol	20.91	17.97
TraesCS7D01G483900.1	Wheat	cytosol	18.79	16.19

Protein Annotations

EnsemblPlants:TraesCS4D01G286700.1	EnsemblPlantsGene:TraesCS4D01G286700	Gene3D:2.120.10.80	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	PANTHER:PTHR24413	PANTHER:PTHR24413:SF133	PFAM:PF01344
SMART:SM00612	SUPFAM:SSF117281	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr4D:+:458384021..458385084

Molecular Weight (calculated)

36810.9 Da

IEP (calculated)

7.193

GRAVY (calculated)

-0.210

Length

330 amino acids

Sequence
(BLAST)

001: MPSINCLLRL SRSDYGSVAS LNRDFNSLVR NGEIYRLRRQ NGIAEHWVYF SCNVLEWDAY DPYRERWIQV PKMPPDECFM CSDKESLAVG TELLVFGMAH
101: IVFRYSILTN SWTRADPMNS PRCLFGSTSV GEKAYVAGGT DASGKILSSA EMYDSVTHTW TPLPSMNRAR KMCSGVFLDG KFYVIGGVTN NNQVLTCGEE
201: YDLNRGSWRV IENMSEGLNG VTGAPPLIAV VNNQLYAADY SEKDVKKYDK LNNKWIALGK LPERSVSMNG WGLAFRACGD RLIVIGGPRT SIGGIIELNS
301: WVPDEQPPVW NLVATRQSGN FVYNCAVMGC

Best Arabidopsis Sequence Match ( AT1G14330.1 )
(BLAST)

001: MVEDRTYLMS RIFSSSRLSE SKWPYMYPQP EDSSESNLIN GKRALENDVD ELRQSKSPRL MGFSIHGNEA IEEDEQEQDQ SDSNNNGNSD GDSLINDIGR
101: DNSISCLIRC SRSGYGSIAS LNRSFRSLVK TGEIYRLRRQ NQIVEHWVYF SCQLLEWVAF NPFERRWMNL PTMPSGVTFM CADKESLAVG TDLLVLGKDD
201: YSSHVIYRYS LLTNSWSSGM RMNSPRCLFG SASLGEIAIF AGGFDSFGKI SDSAEMYNSE LQTWTTLPKM NKPRKMCSGV FMDGKFYVIG GIGGNDSKVL
301: TCGEEFDLET KKWTEIPEMS PPRSREMPAA AEAPPLVAVV NNELYAADHA DMEVRKYDKE SKKWFTLGRL PERADSVNGW GLAFRACGER LIVIGGPRSS
401: GGGYIELNSW IPSSDRSPPL WTLLGRKHSS NFVYNCAVMG C

Arabidopsis Description

At1g14330/F14L17_7 [Source:UniProtKB/TrEMBL;Acc:Q9M9S9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.