Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY16205 | Canola | nucleus | 87.17 | 86.76 |
| CDY46430 | Canola | cytosol | 87.17 | 86.15 |
| Bra016297.1-P | Field mustard | cytosol | 86.94 | 85.92 |
| CDY52764 | Canola | cytosol | 86.7 | 85.88 |
| Solyc04g005670.1.1 | Tomato | cytosol | 60.33 | 62.87 |
| PGSC0003DMT400007346 | Potato | nucleus | 62.47 | 60.74 |
| TraesCS4D01G286700.1 | Wheat | cytosol | 47.51 | 60.61 |
| AT1G14330.1 | Thale cress | nucleus | 62.47 | 59.64 |
| TraesCS4A01G493800.1 | Wheat | cytosol | 35.39 | 59.36 |
| AT2G02870.1 | Thale cress | nucleus | 63.66 | 57.39 |
| GSMUA_Achr8P01380_001 | Banana | cytosol | 47.51 | 52.63 |
| PGSC0003DMT400059324 | Potato | cytosol | 59.62 | 52.29 |
| Zm00001d052253_P001 | Maize | cytosol | 52.26 | 52.01 |
| GSMUA_Achr1P21630_001 | Banana | cytosol | 46.56 | 51.99 |
| TraesCS7A01G004600.1 | Wheat | cytosol | 44.89 | 51.92 |
| AT1G74510.2 | Thale cress | cytosol | 55.58 | 51.88 |
| TraesCS6B01G334300.1 | Wheat | cytosol, nucleus, plastid | 52.26 | 51.76 |
| TraesCS6D01G285100.1 | Wheat | cytosol, nucleus, plastid | 52.26 | 51.76 |
| Os02t0748300-01 | Rice | cytosol | 52.26 | 51.64 |
| TraesCS6A01G306000.1 | Wheat | cytosol | 52.02 | 51.53 |
| KXG30756 | Sorghum | cytosol | 52.02 | 51.53 |
| TraesCS4A01G016200.1 | Wheat | cytosol | 52.73 | 51.51 |
| HORVU6Hr1G075590.1 | Barley | cytosol, nucleus, plastid | 51.78 | 51.29 |
| Solyc04g005870.1.1 | Tomato | cytosol | 6.41 | 50.94 |
| GSMUA_Achr4P09990_001 | Banana | cytosol | 51.78 | 50.82 |
| HORVU4Hr1G075310.1 | Barley | cytosol | 52.49 | 50.34 |
| KRH45883 | Soybean | cytosol | 64.37 | 50.28 |
| KXG40080 | Sorghum | cytosol | 51.07 | 50.23 |
| Os03t0171600-01 | Rice | cytosol | 51.31 | 50.12 |
| Zm00001d027856_P001 | Maize | cytosol | 50.83 | 49.88 |
| TraesCS7D01G007100.1 | Wheat | cytosol | 43.94 | 49.73 |
| Zm00001d048310_P001 | Maize | cytosol | 50.36 | 49.53 |
| KRH74828 | Soybean | cytosol | 62.47 | 48.98 |
| GSMUA_Achr7P20970_001 | Banana | cytosol | 45.84 | 48.86 |
| TraesCS7D01G005100.1 | Wheat | cytosol | 24.94 | 48.84 |
| VIT_01s0026g02080.t01 | Wine grape | nucleus | 62.71 | 48.8 |
| KRG99114 | Soybean | cytosol | 62.47 | 48.79 |
| KRH70694 | Soybean | cytosol | 62.23 | 48.61 |
| Zm00001d014203_P001 | Maize | cytosol, nucleus, plastid | 50.36 | 47.86 |
| OQU91835 | Sorghum | cytosol, nucleus, plastid | 50.36 | 47.75 |
| GSMUA_Achr4P00520_001 | Banana | cytosol | 43.94 | 47.56 |
| TraesCS4A01G487800.1 | Wheat | cytosol | 28.74 | 46.9 |
| Zm00001d033012_P001 | Maize | cytosol | 49.64 | 46.86 |
| PGSC0003DMT400091785 | Potato | cytosol, mitochondrion, plastid | 17.58 | 46.84 |
| Zm00001d048898_P001 | Maize | cytosol | 47.98 | 46.44 |
| GSMUA_Achr10P... | Banana | nucleus | 47.27 | 45.75 |
| GSMUA_Achr8P17960_001 | Banana | nucleus | 45.13 | 45.67 |
| Os11t0602800-01 | Rice | nucleus | 46.32 | 45.14 |
| Zm00001d007596_P001 | Maize | nucleus, plastid | 47.03 | 44.9 |
| HORVU2Hr1G057140.1 | Barley | cytosol | 19.71 | 44.62 |
| HORVU2Hr1G057150.1 | Barley | cytosol | 19.71 | 44.62 |
| OQU83795 | Sorghum | cytosol | 45.84 | 43.27 |
| TraesCS4A01G492300.1 | Wheat | cytosol, golgi, plastid | 39.43 | 43.12 |
| TraesCS4A01G489600.1 | Wheat | cytosol | 38.48 | 42.86 |
| TraesCS4A01G489300.1 | Wheat | cytosol | 38.72 | 42.78 |
| GSMUA_Achr2P14920_001 | Banana | mitochondrion | 48.46 | 42.68 |
| AT5G60570.2 | Thale cress | cytosol | 39.19 | 41.98 |
| GSMUA_Achr3P01570_001 | Banana | golgi | 47.98 | 41.31 |
| PGSC0003DMT400007391 | Potato | cytosol | 12.35 | 38.81 |
| Solyc05g007220.2.1 | Tomato | nucleus | 58.43 | 38.2 |
| GSMUA_Achr4P24130_001 | Banana | nucleus | 46.56 | 37.91 |
| HORVU7Hr1G000010.5 | Barley | cytosol | 39.19 | 37.67 |
| HORVU7Hr1G000070.1 | Barley | cytosol | 41.81 | 33.52 |
| TraesCS4A01G491100.1 | Wheat | cytosol | 40.38 | 32.32 |
| AT3G27150.1 | Thale cress | cytosol | 29.93 | 29.86 |
| AT5G40680.1 | Thale cress | mitochondrion | 29.22 | 29.64 |
| TraesCS4A01G493200.1 | Wheat | cytosol, plasma membrane | 32.54 | 28.9 |
| AT1G67480.1 | Thale cress | cytosol, mitochondrion | 18.53 | 20.74 |
| AT3G61350.2 | Thale cress | cytosol | 17.1 | 20.11 |
| AT1G16250.2 | Thale cress | cytosol | 18.29 | 20.1 |
| AT3G63220.2 | Thale cress | cytosol | 16.63 | 19.89 |
| AT1G55270.1 | Thale cress | mitochondrion | 20.19 | 19.59 |
| AT1G27420.1 | Thale cress | cytosol, plastid | 15.68 | 19.08 |
| AT1G22040.1 | Thale cress | plastid | 20.9 | 18.53 |
| AT2G24540.1 | Thale cress | cytosol | 15.68 | 17.74 |
| AT1G30090.1 | Thale cress | mitochondrion, plastid | 16.15 | 17.09 |
Protein Annotations
| Gene3D:2.120.10.80 | MapMan:35.1 | EntrezGene:839583 | UniProt:A0A178WG14 | ProteinID:AAD14499.1 | ProteinID:AEE30761.1 |
| EMBL:AK227412 | ArrayExpress:AT1G26930 | EnsemblPlantsGene:AT1G26930 | RefSeq:AT1G26930 | TAIR:AT1G26930 | RefSeq:AT1G26930-TAIR-G |
| EnsemblPlants:AT1G26930.1 | TAIR:AT1G26930.1 | Unigene:At.26913 | EMBL:BT006467 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 |
| GO:GO:0005777 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 |
| GO:GO:0019005 | GO:GO:0019538 | GO:GO:0030162 | GO:GO:0031625 | GO:GO:0042787 | GO:GO:0043161 |
| InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | RefSeq:NP_174015.2 | ProteinID:OAP17318.1 | PFAM:PF01344 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020003 | PO:PO:0020030 |
| PO:PO:0020100 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR24413 | PANTHER:PTHR24413:SF138 | UniProt:Q84M94 |
| SMART:SM00612 | SUPFAM:SSF117281 | UniParc:UPI0000190A44 | SEG:seg | : | : |
Description
F-box/kelch-repeat protein At1g26930 [Source:UniProtKB/Swiss-Prot;Acc:Q84M94]
Coordinates
chr1:-:9336057..9337938
Molecular Weight (calculated)
47197.2 Da
IEP (calculated)
7.335
GRAVY (calculated)
-0.351
Length
421 amino acids
Sequence
(BLAST)
(BLAST)
001: MFEGRPRDSC LVSTLFTMPS HKETKWSFLV SGKRSFLNND ESDLHFKKMY KLTTDSSEGE DNGSSSDSGT LIPGMNRDDS LSCLIRCSRA DYCSIASVNR
101: SLRSLIRSGE IYRLRRLQGT LEHWVYFSCH LNEWEAFDPR SKRWMHLPSM PQNECFRYAD KESLAVGTDL LVFGWEVSSY VIYRYSLLTN SWSTAKSMNM
201: PRCLFGSASY GEIAVLAGGC DSSGRILDTA ELYNYEDQTW LVLPGMNKRR KMCSGVFMDG KFYVIGGIGV GEENEPKVLT CGEEFDLKTR KWTEIPEMSP
301: PRSNQGNGMS AAAMAPPLVA VVNDQLYAAD HAGMAVRRYD KEKRVWNKVG NLPEQAGSMN GWGLAFRACG DRIIVIGGPK APGEGFIELN SWVPSVTTPE
401: WHLLGKKQSV NFVYNCAVMS C
101: SLRSLIRSGE IYRLRRLQGT LEHWVYFSCH LNEWEAFDPR SKRWMHLPSM PQNECFRYAD KESLAVGTDL LVFGWEVSSY VIYRYSLLTN SWSTAKSMNM
201: PRCLFGSASY GEIAVLAGGC DSSGRILDTA ELYNYEDQTW LVLPGMNKRR KMCSGVFMDG KFYVIGGIGV GEENEPKVLT CGEEFDLKTR KWTEIPEMSP
301: PRSNQGNGMS AAAMAPPLVA VVNDQLYAAD HAGMAVRRYD KEKRVWNKVG NLPEQAGSMN GWGLAFRACG DRIIVIGGPK APGEGFIELN SWVPSVTTPE
401: WHLLGKKQSV NFVYNCAVMS C
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.