Factsheet for AT3G27150.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY34175	Canola	cytosol	79.38	81.51
Bra032983.1-P	Field mustard	cytosol	78.91	81.02
CDY28493	Canola	cytosol	77.25	79.32
Bra025251.1-P	Field mustard	cytosol	77.01	75.06
CDY52395	Canola	cytosol	76.3	74.36
CDY13683	Canola	cytosol	76.3	74.36
AT5G40680.1	Thale cress	mitochondrion	57.35	58.31
KRH06951	Soybean	cytosol	48.1	50.25
KRG94518	Soybean	mitochondrion	47.63	50.12
PGSC0003DMT400021985	Potato	nucleus	49.29	49.88
KRH57678	Soybean	cytosol	46.21	49.49
VIT_14s0068g02150.t01	Wine grape	cytosol	50.24	44.44
Solyc07g009410.2.1	Tomato	cytosol	36.02	34.08
AT5G60570.2	Thale cress	cytosol	30.09	32.32
AT1G14330.1	Thale cress	nucleus	31.28	29.93
AT1G26930.1	Thale cress	cytosol	29.86	29.93
AT2G02870.1	Thale cress	nucleus	31.99	28.91
AT1G74510.2	Thale cress	cytosol	29.62	27.72
AT1G67480.1	Thale cress	cytosol, mitochondrion	17.77	19.95
AT1G55270.1	Thale cress	mitochondrion	19.91	19.35
AT1G27420.1	Thale cress	cytosol, plastid	15.64	19.08
AT1G16250.2	Thale cress	cytosol	17.3	19.06
AT3G63220.2	Thale cress	cytosol	15.88	19.03
AT1G30090.1	Thale cress	mitochondrion, plastid	17.06	18.09
AT1G22040.1	Thale cress	plastid	19.91	17.68
AT3G61350.2	Thale cress	cytosol	14.22	16.76
AT2G24540.1	Thale cress	cytosol	12.56	14.25

Protein Annotations

Gene3D:2.120.10.80	MapMan:35.1	EntrezGene:822334	ProteinID:AEE77273.1	ProteinID:ANM63869.1	ArrayExpress:AT3G27150
EnsemblPlantsGene:AT3G27150	RefSeq:AT3G27150	TAIR:AT3G27150	RefSeq:AT3G27150-TAIR-G	EnsemblPlants:AT3G27150.1	TAIR:AT3G27150.1
Unigene:At.6227	ProteinID:BAB01932.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006464	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0019005	GO:GO:0019538	GO:GO:0030162
GO:GO:0031625	GO:GO:0042787	GO:GO:0043161	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1
RefSeq:NP_001319655.1	RefSeq:NP_189351.1	PFAM:PF01344	PO:PO:0009005	PO:PO:0020100	PANTHER:PTHR24413
PANTHER:PTHR24413:SF160	UniProt:Q9LI89	SMART:SM00612	SUPFAM:SSF117281	UniParc:UPI00000A9889	:

Description

F-box/kelch-repeat protein At3g27150 [Source:UniProtKB/Swiss-Prot;Acc:Q9LI89]

Coordinates

chr3:-:10009442..10011807

Molecular Weight (calculated)

47184.6 Da

IEP (calculated)

7.916

GRAVY (calculated)

-0.276

Length

422 amino acids

Sequence
(BLAST)

001: MLTLGEDQIG RIGASSSWSR SKKLRVHRYE IPDLNVEPSL DWDGEETGEA TKALSSTCLK PKDADYCLLN VPQLVYELEV EILARVPRFE YWKLKLLNKG
101: FSRLLKSDEI FKVRRERGVV EPSVFMLSSG DTCWTMFDKG FGNCQKLPEL PSDICFLHGD KESLCAGTHL IVTGKEEKSI ALWRYELETS KWFKGPAMIT
201: PRILFASATC GTVVFVAGGL KIEGNGTMEV VDSVEKYDSK TKTWTLLRGM HKRRKFCSGC YLRGKFYVLG GRDENGQNLT CGESYDEKTN TWELIPDILK
301: DMSFSSVQSP PLIAVVGDDL YSLETSANEL RVYDANANSW KKLGDVPVRA KSNGGWGVAF KSLGDKLLVI GASAGPSRAE TMSVYTSRPS ANPANKLYWE
401: ESKRCCGVRF NHFILNCCVM IA

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.