Factsheet for VIT_14s0068g02150.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400021985	Potato	nucleus	54.51	62.35
KRH57678	Soybean	cytosol	47.8	57.87
KRH06951	Soybean	cytosol	47.59	56.19
KRG94518	Soybean	mitochondrion	46.54	55.36
CDY28493	Canola	cytosol	45.28	52.55
Bra032983.1-P	Field mustard	cytosol	45.28	52.55
CDY34175	Canola	cytosol	45.07	52.31
AT3G27150.1	Thale cress	cytosol	44.44	50.24
CDY13683	Canola	cytosol	45.28	49.88
Bra025251.1-P	Field mustard	cytosol	45.07	49.65
CDY66938	Canola	cytosol, mitochondrion	18.24	49.43
CDY52395	Canola	cytosol	44.86	49.42
Bra032052.1-P	Field mustard	cytosol	17.4	47.16
CDX82682	Canola	cytosol	30.82	46.96
CDY53460	Canola	cytosol	17.19	46.59
CDY65956	Canola	cytosol	18.03	45.74
CDY49979	Canola	cytosol	38.57	45.1
AT5G40680.1	Thale cress	mitochondrion	38.78	44.58
CDX90239	Canola	cytosol	36.9	44.33
Bra010784.1-P	Field mustard	cytosol	36.9	44.33
CDY36146	Canola	cytosol	38.36	43.88
CDY63005	Canola	cytosol	38.16	43.65
CDY69929	Canola	cytosol	37.95	43.41
CDY64780	Canola	cytosol	38.99	42.86
Bra034944.1-P	Field mustard	cytosol	36.69	42.79
Solyc07g009410.2.1	Tomato	cytosol	38.78	41.48
CDY12345	Canola	cytosol	39.2	41.1
VIT_16s0039g01470.t01	Wine grape	cytosol	31.66	39.32
VIT_06s0004g02980.t01	Wine grape	cytosol	28.09	36.81
CDY49977	Canola	cytosol	35.43	35.96
VIT_17s0000g05920.t01	Wine grape	cytosol	28.72	30.93
VIT_01s0026g02080.t01	Wine grape	nucleus	27.67	24.4
VIT_07s0151g00770.t01	Wine grape	cytosol	16.35	22.61
VIT_06s0004g00860.t01	Wine grape	cytosol	18.03	19.68
VIT_11s0016g05050.t01	Wine grape	cytosol	17.4	19.39
VIT_01s0010g03320.t01	Wine grape	cytosol	15.3	18.96
VIT_12s0055g00910.t01	Wine grape	cytosol	18.87	18.79
VIT_18s0001g04730.t01	Wine grape	cytosol, plastid	18.45	18.45
VIT_15s0046g02790.t01	Wine grape	cytosol	10.48	18.12
VIT_04s0008g02380.t01	Wine grape	cytosol, peroxisome, plastid	14.05	18.11
VIT_15s0046g02710.t01	Wine grape	cytosol	13.0	17.27
VIT_10s0003g03730.t01	Wine grape	cytosol	7.34	15.22

Protein Annotations

EntrezGene:100267013	wikigene:100267013	Gene3D:2.120.10.80	MapMan:35.1	EMBL:AM440955	ProteinID:CAN60757
ProteinID:CAN60757.1	ProteinID:CCB47027	ProteinID:CCB47027.1	UniProt:F6H3Y7	EMBL:FN595232	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0019005
GO:GO:0019538	GO:GO:0030162	GO:GO:0031625	GO:GO:0042787	GO:GO:0043161	InterPro:IPR015915
InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	EntrezGene:LOC100267013	wikigene:LOC100267013	PFAM:PF01344	PANTHER:PTHR24413
PANTHER:PTHR24413:SF160	SMART:SM00612	SUPFAM:SSF117281	UniParc:UPI00021083DF	ArrayExpress:VIT_14s0068g02150	EnsemblPlantsGene:VIT_14s0068g02150
EnsemblPlants:VIT_14s0068g02150.t01	unigene:Vvi.19703	RefSeq:XP_002273717	RefSeq:XP_002273717.1	:	:

Description

No Description!

Coordinates

chr14:-:25740218..25742546

Molecular Weight (calculated)

53040.9 Da

IEP (calculated)

7.452

GRAVY (calculated)

-0.348

Length

477 amino acids

Sequence
(BLAST)

001: MAKRSVSLES SPVSLDRSLV FGSQFLFQRI FLEGYKAVGS MSRGKENEIE DEEGKSLCMC DSNVRNRRGV LDGDSGNGCW ASSSSPPPEK IRARGTVRRL
101: DPSRNGFSSG ECRVGSSSAV DTQDADYSDG PSLSYEVEGL ILARVPRSEY WKFCFVNKRY LTLLKSGELF KIRREIGVKE SSVFMLASGE TSWWAFDRQF
201: ESRRRLPILP SDPCFTSADK ESVCAGTHLI VSGREFEGVV IWRYELAMNK WFKGPSMLNP RCMFASANCG AFACVAGGIS MVSTKEVLNS AEIYNPDNKS
301: WDTLPRMNKR RKHCSGCYMD NKFYVIGGQD EKGEGLTCGE AYDEDRKAWD LIPDMLKDAP VSTSESPPLV AVVNNDLYSL EASSNELKVY LKKTNSWRRL
401: GTVPVRADFN RGWGVAFKSL GNELLVIGAS SVSFAGHGMT IYTCCPDPDA EELLWKPLDS GRNRLSHFIL NCSIMIA

Best Arabidopsis Sequence Match ( AT3G27150.2 )
(BLAST)

001: MLTLGEDQIG RIGASSSWSR SKKLRVHRYE IPDLNVEPSL DWDGEETGEA TKALSSTCLK PKDADYCLLN VPQLVYELEV EILARVPRFE YWKLKLLNKG
101: FSRLLKSDEI FKVRRERGVV EPSVFMLSSG DTCWTMFDKG FGNCQKLPEL PSDICFLHGD KESLCAGTHL IVTGKEEKSI ALWRYELETS KWFKGPAMIT
201: PRILFASATC GTVVFVAGGL KIEGNGTMEV VDSVEKYDSK TKTWTLLRGM HKRRKFCSGC YLRGKFYVLG GRDENGQNLT CGESYDEKTN TWELIPDILK
301: DMSFSSVQSP PLIAVVGDDL YSLETSANEL RVYDANANSW KKLGDVPVRA KSNGGWGVAF KSLGDKLLVI GASAGPSRAE TMSVYTSRPS ANPANKLYWE
401: ESKRCCGVRF NHFILNCCVM IA

Arabidopsis Description

F-box/kelch-repeat protein At3g27150 [Source:UniProtKB/Swiss-Prot;Acc:Q9LI89]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.