Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY66938 | Canola | cytosol, mitochondrion | 41.97 | 99.43 |
| CDY36146 | Canola | cytosol | 98.08 | 98.08 |
| CDY63005 | Canola | cytosol | 97.36 | 97.36 |
| CDY53460 | Canola | cytosol | 39.33 | 93.18 |
| CDY65956 | Canola | cytosol | 39.33 | 87.23 |
| CDY64780 | Canola | cytosol | 87.53 | 84.1 |
| CDX82682 | Canola | cytosol | 61.15 | 81.47 |
| CDY12345 | Canola | cytosol | 86.81 | 79.56 |
| AT5G40680.1 | Thale cress | mitochondrion | 60.91 | 61.2 |
| CDY49979 | Canola | cytosol | 56.12 | 57.35 |
| CDX90239 | Canola | cytosol | 53.72 | 56.42 |
| CDY34175 | Canola | cytosol | 52.04 | 52.8 |
| CDY52395 | Canola | cytosol | 53.24 | 51.27 |
| CDY28493 | Canola | cytosol | 50.36 | 51.09 |
| CDY13683 | Canola | cytosol | 52.04 | 50.12 |
| CDY49977 | Canola | cytosol | 50.12 | 44.47 |
| KRG94518 | Soybean | mitochondrion | 41.01 | 42.64 |
| KRH57678 | Soybean | cytosol | 40.29 | 42.64 |
| KRH06951 | Soybean | cytosol | 40.77 | 42.08 |
| PGSC0003DMT400021985 | Potato | nucleus | 39.81 | 39.81 |
| VIT_14s0068g02150.t01 | Wine grape | cytosol | 43.41 | 37.95 |
| CDY33755 | Canola | cytosol | 9.59 | 32.52 |
| CDY31534 | Canola | cytosol | 28.06 | 31.2 |
| CDX80156 | Canola | cytosol | 28.3 | 31.13 |
| CDY60836 | Canola | cytosol | 27.34 | 30.0 |
| Solyc07g009410.2.1 | Tomato | cytosol | 31.18 | 29.15 |
| CDX68177 | Canola | cytosol | 29.02 | 29.02 |
| CDY62015 | Canola | nucleus | 28.78 | 28.92 |
| CDY09349 | Canola | nucleus | 30.7 | 28.83 |
| CDX96551 | Canola | cytosol | 28.06 | 28.82 |
| CDX85842 | Canola | cytosol | 29.26 | 28.57 |
| CDY49094 | Canola | nucleus | 29.02 | 28.54 |
| CDY70379 | Canola | cytosol | 10.79 | 28.48 |
| CDX73096 | Canola | cytosol | 27.34 | 28.43 |
| CDX81631 | Canola | nucleus | 27.82 | 28.36 |
| CDY62176 | Canola | nucleus | 30.22 | 28.19 |
| CDY16205 | Canola | nucleus | 28.54 | 28.13 |
| CDY17425 | Canola | cytosol | 26.86 | 27.93 |
| CDY52764 | Canola | cytosol | 28.3 | 27.76 |
| CDY46430 | Canola | cytosol | 28.3 | 27.7 |
| CDY03028 | Canola | cytosol | 28.78 | 26.73 |
| CDY45190 | Canola | nucleus | 29.02 | 26.71 |
| CDY33754 | Canola | nucleus | 12.71 | 21.2 |
| CDY33348 | Canola | cytosol | 8.15 | 18.89 |
| CDY26117 | Canola | cytosol | 18.23 | 17.47 |
| CDY08233 | Canola | mitochondrion | 18.23 | 17.47 |
| CDX81755 | Canola | cytosol | 16.31 | 17.44 |
| CDY01300 | Canola | cytosol | 9.35 | 17.41 |
| CDY00415 | Canola | mitochondrion | 8.87 | 17.29 |
| CDY52247 | Canola | cytosol | 13.19 | 17.19 |
| CDY58259 | Canola | cytosol | 14.15 | 17.0 |
| CDY18573 | Canola | cytosol | 14.15 | 16.95 |
| CDY15708 | Canola | cytosol | 13.91 | 16.91 |
| CDY03923 | Canola | cytosol | 13.67 | 16.86 |
| CDY35075 | Canola | cytosol | 7.43 | 16.85 |
| CDY64382 | Canola | plastid | 13.67 | 16.67 |
| CDX99882 | Canola | mitochondrion, plastid | 15.83 | 16.58 |
| CDY12647 | Canola | cytosol | 14.39 | 16.57 |
| CDY24045 | Canola | mitochondrion | 17.27 | 16.55 |
| CDY02451 | Canola | cytosol | 17.27 | 16.55 |
| CDY10574 | Canola | cytosol | 17.27 | 16.55 |
| CDX96822 | Canola | extracellular, vacuole | 17.03 | 16.44 |
| CDY26295 | Canola | mitochondrion, plastid | 15.59 | 16.33 |
| CDY33062 | Canola | mitochondrion, plastid | 17.03 | 16.32 |
| CDY11811 | Canola | plastid | 13.19 | 15.94 |
| CDX90085 | Canola | plastid | 13.19 | 15.94 |
| CDY22982 | Canola | cytosol | 13.19 | 15.9 |
| CDX82306 | Canola | cytosol | 13.19 | 15.9 |
| CDY01812 | Canola | cytosol | 14.15 | 15.82 |
| CDY35074 | Canola | cytosol | 7.91 | 15.79 |
| CDY36145 | Canola | cytosol | 13.19 | 15.71 |
| CDX96091 | Canola | cytosol | 13.91 | 15.55 |
| CDX99248 | Canola | cytosol | 12.95 | 15.52 |
| CDY58793 | Canola | cytosol | 12.95 | 15.04 |
| CDY51562 | Canola | cytosol | 12.95 | 15.04 |
| CDY54825 | Canola | cytosol | 6.95 | 15.03 |
| CDY66857 | Canola | cytosol | 12.71 | 14.89 |
| CDY70128 | Canola | cytosol | 11.99 | 14.84 |
| CDY30645 | Canola | nucleus | 7.91 | 14.8 |
| CDY04697 | Canola | cytosol | 7.91 | 14.8 |
| CDY01301 | Canola | cytosol | 5.52 | 14.65 |
| CDY64883 | Canola | golgi, plastid | 13.91 | 14.11 |
| CDY34765 | Canola | cytosol | 12.47 | 13.98 |
| CDX76807 | Canola | cytosol | 12.23 | 13.82 |
| CDY15707 | Canola | cytosol, plastid | 10.79 | 12.75 |
| CDY17172 | Canola | cytosol | 4.32 | 12.5 |
| CDY03921 | Canola | cytosol, extracellular, plasma membrane | 9.11 | 10.76 |
Protein Annotations
| EnsemblPlants:CDY69929 | EnsemblPlantsGene:GSBRNA2T00093646001 | Gene3D:2.120.10.80 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | PANTHER:PTHR24413 | PANTHER:PTHR24413:SF160 | PFAM:PF01344 |
| ProteinID:CDY69929 | ProteinID:CDY69929.1 | SEG:seg | SMART:SM00612 | SUPFAM:SSF117281 | UniParc:UPI0004EEE1DD |
| UniProt:A0A078JSX0 | MapMan:35.1 | : | : | : | : |
Description
BnaCnng65980DBnaCnng65980D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JSX0]
Coordinates
chrLK040703:+:649..1938
Molecular Weight (calculated)
47627.4 Da
IEP (calculated)
7.945
GRAVY (calculated)
-0.288
Length
417 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKINRDVLM LREDQAPKVG ASLSQSEPRK ISMVGIKPHI PDLNVQPISD SDEEEKGEIA KEFQNLAGLK THNACYIIAR LPCFEYWKLQ FLNKKFLQLL
101: KSCEIFRVRQ EKGLVKPYVI LHSGALSNWE MFDKDFKTFR RLPKVPSSDY CFFHSDKETV SVGTQLIVIG REIDGIVVFR YELENHKWFK VPSMITPRAM
201: YGSASHGKTA FFAGGIKMDE NGNPVVVQTV EKYNADTKRW TMINGMHKAR KFSSGCFLRG KFYVLGGRDD NDKHLTCGES YDETTNSWEL IPDMLKDMTV
301: IAHSQSPPLI AVVDDNLYML ETSLNELRVY DINTNIWKKL GVVPVSANAA FGWGIAFKSM GDRLLVIGTS HSWHRKTVVH SCRPSPDVEE QHWEEIKYWC
401: VGAELPQFIH NCCVMFA
101: KSCEIFRVRQ EKGLVKPYVI LHSGALSNWE MFDKDFKTFR RLPKVPSSDY CFFHSDKETV SVGTQLIVIG REIDGIVVFR YELENHKWFK VPSMITPRAM
201: YGSASHGKTA FFAGGIKMDE NGNPVVVQTV EKYNADTKRW TMINGMHKAR KFSSGCFLRG KFYVLGGRDD NDKHLTCGES YDETTNSWEL IPDMLKDMTV
301: IAHSQSPPLI AVVDDNLYML ETSLNELRVY DINTNIWKKL GVVPVSANAA FGWGIAFKSM GDRLLVIGTS HSWHRKTVVH SCRPSPDVEE QHWEEIKYWC
401: VGAELPQFIH NCCVMFA
001: MSLMLQKNQA RGTRASLSQF EPRKLLIAST KPTIPDLNAE PCSDSEEEET VENLTSLAPQ DAHNGLPKLM FDLEVEIFSR LSCFQYWKLN LLNKQFSQLL
101: QSREIFKVRR ERGLVQPYVL MFSSGETCWV MFDKGFKNFR QLPEIPSDFC FFYGDKETIT AGTHLIVIGR EEKRIVVWRY ELEVNKWIND TEMITPRVMY
201: ASASRGTDAF FAGGIKTSEN GGPDVVNVAE RYNSDTKTWK AMKAMHKRRK FSSGCFLRGK FYALGGRDEN DVYLTCGESY DELTDSWKLI PDMLKGMTFM
301: NPQSPPLIAV VKDNLYLLET WLNELWVYDI NANVWKNLGV VPVKANAALG WGVAFKSVGD RILVIGASVT KSWDNKMSVY TCCPFPKVEK ITWEETSCDC
401: VQLGHFIRNC CVMLA
101: QSREIFKVRR ERGLVQPYVL MFSSGETCWV MFDKGFKNFR QLPEIPSDFC FFYGDKETIT AGTHLIVIGR EEKRIVVWRY ELEVNKWIND TEMITPRVMY
201: ASASRGTDAF FAGGIKTSEN GGPDVVNVAE RYNSDTKTWK AMKAMHKRRK FSSGCFLRGK FYALGGRDEN DVYLTCGESY DELTDSWKLI PDMLKGMTFM
301: NPQSPPLIAV VKDNLYLLET WLNELWVYDI NANVWKNLGV VPVKANAALG WGVAFKSVGD RILVIGASVT KSWDNKMSVY TCCPFPKVEK ITWEETSCDC
401: VQLGHFIRNC CVMLA
Arabidopsis Description
Galactose oxidase/kelch repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9FM30]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.