Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY70128 | Canola | cytosol | 74.29 | 77.15 |
| CDY66857 | Canola | cytosol | 78.0 | 76.69 |
| CDY54825 | Canola | cytosol | 39.14 | 70.98 |
| CDY11811 | Canola | plastid | 69.43 | 70.43 |
| CDX90085 | Canola | plastid | 68.86 | 69.86 |
| AT1G27420.1 | Thale cress | cytosol, plastid | 66.29 | 67.05 |
| CDY52247 | Canola | cytosol | 61.14 | 66.88 |
| CDY15708 | Canola | cytosol | 58.29 | 59.48 |
| CDY03923 | Canola | cytosol | 54.57 | 56.51 |
| CDY64382 | Canola | plastid | 54.29 | 55.56 |
| CDY15707 | Canola | cytosol, plastid | 47.71 | 47.31 |
| CDY03921 | Canola | cytosol, extracellular, plasma membrane | 38.29 | 37.96 |
| CDY12647 | Canola | cytosol | 34.0 | 32.87 |
| CDY01812 | Canola | cytosol | 34.0 | 31.9 |
| CDX96091 | Canola | cytosol | 33.71 | 31.64 |
| CDY64883 | Canola | golgi, plastid | 33.71 | 28.71 |
| CDY35074 | Canola | cytosol | 12.0 | 20.1 |
| CDY51562 | Canola | cytosol | 20.29 | 19.78 |
| CDX99882 | Canola | mitochondrion, plastid | 21.71 | 19.1 |
| CDY08233 | Canola | mitochondrion | 23.71 | 19.08 |
| CDY10574 | Canola | cytosol | 23.71 | 19.08 |
| CDY26117 | Canola | cytosol | 23.71 | 19.08 |
| CDY02451 | Canola | cytosol | 23.43 | 18.85 |
| CDY26295 | Canola | mitochondrion, plastid | 21.43 | 18.84 |
| CDY58793 | Canola | cytosol | 19.14 | 18.66 |
| CDY65956 | Canola | cytosol | 10.0 | 18.62 |
| CDX82306 | Canola | cytosol | 18.29 | 18.5 |
| CDY58259 | Canola | cytosol | 18.29 | 18.44 |
| CDY18573 | Canola | cytosol | 18.29 | 18.39 |
| CDX99248 | Canola | cytosol | 18.29 | 18.39 |
| CDY33062 | Canola | mitochondrion, plastid | 22.86 | 18.39 |
| CDY24045 | Canola | mitochondrion | 22.86 | 18.39 |
| CDY22982 | Canola | cytosol | 18.0 | 18.21 |
| CDY31534 | Canola | cytosol | 19.14 | 17.87 |
| CDX80156 | Canola | cytosol | 19.14 | 17.68 |
| CDX81755 | Canola | cytosol | 19.43 | 17.44 |
| CDY01301 | Canola | cytosol | 7.71 | 17.2 |
| CDX76807 | Canola | cytosol | 18.0 | 17.07 |
| CDY01300 | Canola | cytosol | 10.86 | 16.96 |
| CDY46430 | Canola | cytosol | 20.29 | 16.67 |
| CDY34765 | Canola | cytosol | 17.71 | 16.67 |
| CDY60836 | Canola | cytosol | 18.0 | 16.58 |
| CDY16205 | Canola | nucleus | 20.0 | 16.55 |
| CDY52764 | Canola | cytosol | 20.0 | 16.47 |
| CDX96822 | Canola | extracellular, vacuole | 20.29 | 16.44 |
| CDY33754 | Canola | nucleus | 11.71 | 16.4 |
| CDY17425 | Canola | cytosol | 18.57 | 16.21 |
| CDY34175 | Canola | cytosol | 18.86 | 16.06 |
| CDY09349 | Canola | nucleus | 20.29 | 15.99 |
| CDY28493 | Canola | cytosol | 18.57 | 15.82 |
| CDY49094 | Canola | nucleus | 19.14 | 15.8 |
| CDY62015 | Canola | nucleus | 18.57 | 15.66 |
| CDY45190 | Canola | nucleus | 20.0 | 15.45 |
| CDY62176 | Canola | nucleus | 19.71 | 15.44 |
| CDY00415 | Canola | mitochondrion | 9.43 | 15.42 |
| CDY13683 | Canola | cytosol | 18.86 | 15.24 |
| CDX81631 | Canola | nucleus | 17.71 | 15.16 |
| CDY03028 | Canola | cytosol | 19.43 | 15.14 |
| CDX82682 | Canola | cytosol | 13.43 | 15.02 |
| CDY33348 | Canola | cytosol | 7.71 | 15.0 |
| CDX68177 | Canola | cytosol | 17.71 | 14.87 |
| CDX85842 | Canola | cytosol | 17.71 | 14.52 |
| CDY04697 | Canola | cytosol | 9.14 | 14.35 |
| CDY30645 | Canola | nucleus | 9.14 | 14.35 |
| CDX96551 | Canola | cytosol | 16.57 | 14.29 |
| CDX73096 | Canola | cytosol | 16.29 | 14.21 |
| CDY52395 | Canola | cytosol | 17.43 | 14.09 |
| CDY70379 | Canola | cytosol | 6.29 | 13.92 |
| CDY17172 | Canola | cytosol | 5.71 | 13.89 |
| CDY53460 | Canola | cytosol | 6.86 | 13.64 |
| CDY66938 | Canola | cytosol, mitochondrion | 6.86 | 13.64 |
| CDY63005 | Canola | cytosol | 16.0 | 13.43 |
| CDY36146 | Canola | cytosol | 15.71 | 13.19 |
| CDY69929 | Canola | cytosol | 15.71 | 13.19 |
| CDY64780 | Canola | cytosol | 16.29 | 13.13 |
| CDX90239 | Canola | cytosol | 14.86 | 13.1 |
| CDY49979 | Canola | cytosol | 14.86 | 12.75 |
| CDY12345 | Canola | cytosol | 16.0 | 12.31 |
| CDY35075 | Canola | cytosol | 5.43 | 10.33 |
| CDY49977 | Canola | cytosol | 13.43 | 10.0 |
| CDY33755 | Canola | cytosol | 3.43 | 9.76 |
Protein Annotations
| Gene3D:2.120.10.80 | MapMan:35.1 | UniProt:A0A078HCL3 | EnsemblPlants:CDY36145 | ProteinID:CDY36145 | ProteinID:CDY36145.1 |
| InterPro:F-box-like_dom_sf | InterPro:F-box_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00059992001 |
| InterPro:IPR001810 | InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | PFAM:PF00646 | PFAM:PF01344 |
| PANTHER:PTHR24412 | PANTHER:PTHR24412:SF377 | SMART:SM00256 | SMART:SM00612 | SUPFAM:SSF117281 | SUPFAM:SSF81383 |
| UniParc:UPI0004EF39C9 | SEG:seg | : | : | : | : |
Description
BnaA08g19030DBnaA08g19030D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HCL3]
Coordinates
chrLK032367:-:377253..378497
Molecular Weight (calculated)
39601.1 Da
IEP (calculated)
7.365
GRAVY (calculated)
-0.201
Length
350 amino acids
Sequence
(BLAST)
(BLAST)
001: MAESSPSSLI PGLTDDVAER CLSRIPRYDF RIISQVCRGW RMFIKSKHFA DVRKLTGPVE EFMCVMMDGR FIRDRQFVNY LYGEVFDASG NNLGQIPRVP
101: GPFKSRFGVA VLGGGKIVII GGYAEVEGFP VDGNRISASA DVYEFDPAFN SWRNLAPMNI PRYSFAFAVA DGLLYVIRGR SSDGKHLLSS EIYNPETNQW
201: SLMDCPHRPN FRCAFAFSFN SKLYVVDDKS RFIEIYDPKT ETWEELDSGQ SLSVYSYTVI RNKVYFFEHN KPGLGVFDPE ENSWSSVFVP WAPGAYWFRL
301: GEWNNKVILI ARMGGCNALT GDLDKANSSK WTATQIKPSG SYPTIVLINF
101: GPFKSRFGVA VLGGGKIVII GGYAEVEGFP VDGNRISASA DVYEFDPAFN SWRNLAPMNI PRYSFAFAVA DGLLYVIRGR SSDGKHLLSS EIYNPETNQW
201: SLMDCPHRPN FRCAFAFSFN SKLYVVDDKS RFIEIYDPKT ETWEELDSGQ SLSVYSYTVI RNKVYFFEHN KPGLGVFDPE ENSWSSVFVP WAPGAYWFRL
301: GEWNNKVILI ARMGGCNALT GDLDKANSSK WTATQIKPSG SYPTIVLINF
001: MVVESSSSPI IPGLTDDVAE LCVSKIPRSS FQITSQVCRR WRSFLRSQHF AAVRKLTGTV EEFLCVLMES ECGRDVYWEV FDASGNKLGQ IPPVPGPLKR
101: GFGVAVLDGG KIVFFGGYTE VEGSGINSTT VSASADVYEF DPANNSWRKL AGMNIPRYNF AFAEVNGLLY VIRGYSTDTY SLSNAEVYNP KTNQWSLMHC
201: PNRPVWRGFA FAFSSKLYAV GNGSRFIDIY DPKTQTWEEL NSEQSVSVYS YTVVRNKVYF MDRNMPGRLG VFDPEENSWS SVFVPPREGG FWVRLGVWNN
301: KVLLFSRVCG HETLMYDLDK EKGSKWRVCD QIKPSASQLA SVLINF
101: GFGVAVLDGG KIVFFGGYTE VEGSGINSTT VSASADVYEF DPANNSWRKL AGMNIPRYNF AFAEVNGLLY VIRGYSTDTY SLSNAEVYNP KTNQWSLMHC
201: PNRPVWRGFA FAFSSKLYAV GNGSRFIDIY DPKTQTWEEL NSEQSVSVYS YTVVRNKVYF MDRNMPGRLG VFDPEENSWS SVFVPPREGG FWVRLGVWNN
301: KVLLFSRVCG HETLMYDLDK EKGSKWRVCD QIKPSASQLA SVLINF
Arabidopsis Description
Putative F-box/kelch-repeat protein At1g27420 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZJ3]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.