Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra034944.1-P | Field mustard | cytosol | 86.64 | 91.93 |
| CDY66938 | Canola | cytosol, mitochondrion | 36.87 | 90.91 |
| CDY65956 | Canola | cytosol | 39.17 | 90.43 |
| CDY12345 | Canola | cytosol | 92.86 | 88.57 |
| CDY36146 | Canola | cytosol | 84.79 | 88.25 |
| CDY69929 | Canola | cytosol | 84.1 | 87.53 |
| CDY63005 | Canola | cytosol | 83.64 | 87.05 |
| CDY53460 | Canola | cytosol | 35.02 | 86.36 |
| CDX82682 | Canola | cytosol | 60.37 | 83.71 |
| AT5G40680.1 | Thale cress | mitochondrion | 60.37 | 63.13 |
| CDY49979 | Canola | cytosol | 57.83 | 61.52 |
| CDX90239 | Canola | cytosol | 54.38 | 59.45 |
| CDY34175 | Canola | cytosol | 54.61 | 57.66 |
| CDY52395 | Canola | cytosol | 55.76 | 55.89 |
| CDY28493 | Canola | cytosol | 52.77 | 55.72 |
| CDY13683 | Canola | cytosol | 54.84 | 54.97 |
| CDY49977 | Canola | cytosol | 50.92 | 47.02 |
| KRH57678 | Soybean | cytosol | 39.86 | 43.91 |
| KRG94518 | Soybean | mitochondrion | 40.55 | 43.89 |
| KRH06951 | Soybean | cytosol | 40.55 | 43.56 |
| PGSC0003DMT400021985 | Potato | nucleus | 40.32 | 41.97 |
| VIT_14s0068g02150.t01 | Wine grape | cytosol | 42.86 | 38.99 |
| CDY33755 | Canola | cytosol | 8.99 | 31.71 |
| CDY31534 | Canola | cytosol | 26.73 | 30.93 |
| CDX80156 | Canola | cytosol | 26.96 | 30.87 |
| CDY60836 | Canola | cytosol | 26.73 | 30.53 |
| CDX68177 | Canola | cytosol | 29.03 | 30.22 |
| CDX96551 | Canola | cytosol | 27.88 | 29.8 |
| CDY70379 | Canola | cytosol | 10.83 | 29.75 |
| CDX85842 | Canola | cytosol | 29.26 | 29.74 |
| CDY09349 | Canola | nucleus | 30.41 | 29.73 |
| CDX73096 | Canola | cytosol | 27.19 | 29.43 |
| CDY62015 | Canola | nucleus | 28.11 | 29.4 |
| CDY16205 | Canola | nucleus | 28.57 | 29.31 |
| CDY62176 | Canola | nucleus | 30.18 | 29.31 |
| CDY17425 | Canola | cytosol | 26.96 | 29.18 |
| Solyc07g009410.2.1 | Tomato | cytosol | 29.95 | 29.15 |
| CDX81631 | Canola | nucleus | 27.42 | 29.1 |
| CDY49094 | Canola | nucleus | 28.11 | 28.77 |
| CDY52764 | Canola | cytosol | 28.11 | 28.71 |
| CDY46430 | Canola | cytosol | 28.11 | 28.64 |
| CDY03028 | Canola | cytosol | 28.57 | 27.62 |
| CDY45190 | Canola | nucleus | 28.8 | 27.59 |
| CDY33754 | Canola | nucleus | 13.13 | 22.8 |
| CDY58259 | Canola | cytosol | 14.29 | 17.87 |
| CDY18573 | Canola | cytosol | 14.29 | 17.82 |
| CDY08233 | Canola | mitochondrion | 17.74 | 17.7 |
| CDY26117 | Canola | cytosol | 17.74 | 17.7 |
| CDY52247 | Canola | cytosol | 12.9 | 17.5 |
| CDY24045 | Canola | mitochondrion | 17.51 | 17.47 |
| CDY33348 | Canola | cytosol | 7.14 | 17.22 |
| CDX99882 | Canola | mitochondrion, plastid | 15.67 | 17.09 |
| CDY64382 | Canola | plastid | 13.36 | 16.96 |
| CDX81755 | Canola | cytosol | 15.21 | 16.92 |
| CDY15708 | Canola | cytosol | 13.36 | 16.91 |
| CDY03923 | Canola | cytosol | 13.13 | 16.86 |
| CDY26295 | Canola | mitochondrion, plastid | 15.44 | 16.83 |
| CDY10574 | Canola | cytosol | 16.82 | 16.78 |
| CDY02451 | Canola | cytosol | 16.82 | 16.78 |
| CDY22982 | Canola | cytosol | 13.36 | 16.76 |
| CDX82306 | Canola | cytosol | 13.36 | 16.76 |
| CDY30645 | Canola | nucleus | 8.53 | 16.59 |
| CDY12647 | Canola | cytosol | 13.82 | 16.57 |
| CDY33062 | Canola | mitochondrion, plastid | 16.59 | 16.55 |
| CDX99248 | Canola | cytosol | 13.13 | 16.38 |
| CDY35075 | Canola | cytosol | 6.91 | 16.3 |
| CDY36145 | Canola | cytosol | 13.13 | 16.29 |
| CDY04697 | Canola | cytosol | 8.29 | 16.14 |
| CDY01812 | Canola | cytosol | 13.82 | 16.09 |
| CDX96822 | Canola | extracellular, vacuole | 15.9 | 15.97 |
| CDX90085 | Canola | plastid | 12.67 | 15.94 |
| CDY11811 | Canola | plastid | 12.67 | 15.94 |
| CDX96091 | Canola | cytosol | 13.59 | 15.82 |
| CDY66857 | Canola | cytosol | 12.9 | 15.73 |
| CDY70128 | Canola | cytosol | 12.21 | 15.73 |
| CDY34765 | Canola | cytosol | 13.13 | 15.32 |
| CDY01301 | Canola | cytosol | 5.53 | 15.29 |
| CDY54825 | Canola | cytosol | 6.68 | 15.03 |
| CDY00415 | Canola | mitochondrion | 7.37 | 14.95 |
| CDX76807 | Canola | cytosol | 12.67 | 14.91 |
| CDY35074 | Canola | cytosol | 7.14 | 14.83 |
| CDY01300 | Canola | cytosol | 7.6 | 14.73 |
| CDY64883 | Canola | golgi, plastid | 13.36 | 14.11 |
| CDY15707 | Canola | cytosol, plastid | 11.06 | 13.6 |
| CDY58793 | Canola | cytosol | 11.06 | 13.37 |
| CDY51562 | Canola | cytosol | 11.06 | 13.37 |
| CDY17172 | Canola | cytosol | 4.38 | 13.19 |
| CDY03921 | Canola | cytosol, extracellular, plasma membrane | 8.99 | 11.05 |
Protein Annotations
| EnsemblPlants:CDY64780 | EnsemblPlantsGene:GSBRNA2T00042716001 | Gene3D:2.120.10.80 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | PANTHER:PTHR24413 | PANTHER:PTHR24413:SF160 | PFAM:PF01344 |
| ProteinID:CDY64780 | ProteinID:CDY64780.1 | SEG:seg | SMART:SM00612 | SUPFAM:SSF117281 | UniParc:UPI0004EF2B47 |
| UniProt:A0A078JED2 | MapMan:35.1 | : | : | : | : |
Description
BnaCnng44860DBnaCnng44860D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JED2]
Coordinates
chrLK034549:-:2688..3992
Molecular Weight (calculated)
49841.0 Da
IEP (calculated)
7.326
GRAVY (calculated)
-0.352
Length
434 amino acids
Sequence
(BLAST)
(BLAST)
001: MMSKEMVKIN PDMLMLSDDQ TPKIGASLSQ SKRRKISIVG IKPNIPDLNV KPCYDSDEEE KGEITKTFQN LAGLKSHDGC YVHHKLLYEL EVEIFARLPC
101: FEYWKLQFLN KKFLQLLKSG EIFRVRQEKG LVKPYVILHS GADSNWEMFD KDFKNFQKLP KVPSSDYCFF HSDKETISVG TQLIVIGREI EGIVVFRYEL
201: ENHKWFKGPS MITPRVMYGS ASHGKIAFFA GGIQKDDNEN PIVVRTVEKY NADTKSWTMI NGMHKARKFS SGCFLRGKFY VLGGRDENDK HLTCGESYDE
301: TTNSWELIPD MLKDMTFIIP SQSPPLIAVV DDNLYMLETS LNELRVYDIN TNIWKKLGVV PVSANTTFGW GTAFKSMGDR LLVVGTSHSW HRKAIVYSCR
401: PSPDVEEQHW EELKYWCTGS ELPPFIHNCC VMFA
101: FEYWKLQFLN KKFLQLLKSG EIFRVRQEKG LVKPYVILHS GADSNWEMFD KDFKNFQKLP KVPSSDYCFF HSDKETISVG TQLIVIGREI EGIVVFRYEL
201: ENHKWFKGPS MITPRVMYGS ASHGKIAFFA GGIQKDDNEN PIVVRTVEKY NADTKSWTMI NGMHKARKFS SGCFLRGKFY VLGGRDENDK HLTCGESYDE
301: TTNSWELIPD MLKDMTFIIP SQSPPLIAVV DDNLYMLETS LNELRVYDIN TNIWKKLGVV PVSANTTFGW GTAFKSMGDR LLVVGTSHSW HRKAIVYSCR
401: PSPDVEEQHW EELKYWCTGS ELPPFIHNCC VMFA
001: MSLMLQKNQA RGTRASLSQF EPRKLLIAST KPTIPDLNAE PCSDSEEEET VENLTSLAPQ DAHNGLPKLM FDLEVEIFSR LSCFQYWKLN LLNKQFSQLL
101: QSREIFKVRR ERGLVQPYVL MFSSGETCWV MFDKGFKNFR QLPEIPSDFC FFYGDKETIT AGTHLIVIGR EEKRIVVWRY ELEVNKWIND TEMITPRVMY
201: ASASRGTDAF FAGGIKTSEN GGPDVVNVAE RYNSDTKTWK AMKAMHKRRK FSSGCFLRGK FYALGGRDEN DVYLTCGESY DELTDSWKLI PDMLKGMTFM
301: NPQSPPLIAV VKDNLYLLET WLNELWVYDI NANVWKNLGV VPVKANAALG WGVAFKSVGD RILVIGASVT KSWDNKMSVY TCCPFPKVEK ITWEETSCDC
401: VQLGHFIRNC CVMLA
101: QSREIFKVRR ERGLVQPYVL MFSSGETCWV MFDKGFKNFR QLPEIPSDFC FFYGDKETIT AGTHLIVIGR EEKRIVVWRY ELEVNKWIND TEMITPRVMY
201: ASASRGTDAF FAGGIKTSEN GGPDVVNVAE RYNSDTKTWK AMKAMHKRRK FSSGCFLRGK FYALGGRDEN DVYLTCGESY DELTDSWKLI PDMLKGMTFM
301: NPQSPPLIAV VKDNLYLLET WLNELWVYDI NANVWKNLGV VPVKANAALG WGVAFKSVGD RILVIGASVT KSWDNKMSVY TCCPFPKVEK ITWEETSCDC
401: VQLGHFIRNC CVMLA
Arabidopsis Description
Galactose oxidase/kelch repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9FM30]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.